RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 C9orf47Q6ZRZ4 202 aa7.62□□□□□ -1.19
VPS11-207ENST00000620429 MRPL53Q96EL3 112 aaKnown RBP7.62□□□□□ -1.19
VPS11-207ENST00000620429 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 ADARB2-AS1A8MUL3 147 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 DNAL4O96015 105 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 S100A4P26447 101 aaKnown RBP7.61□□□□□ -1.19
VPS11-207ENST00000620429 XCL1P47992 114 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 PRR9Q5T870 116 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 Q8N6K4 173 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 COPS9Q8WXC6 57 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 XCL2Q9UBD3 114 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 NDUFA12Q9UI09 145 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 USP9XQ93008 2570 aaPredicted RBP7.61□□□□□ -1.19
VPS11-207ENST00000620429 RBMY1BA6NDE4 496 aaKnown RBP7.61□□□□□ -1.19
VPS11-207ENST00000620429 RBMY1EA6NEQ0 496 aaKnown RBP7.61□□□□□ -1.19
VPS11-207ENST00000620429 H7BZZ5 65 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 IGF1P05019 195 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 RBMY1DP0C7P1 496 aaKnown RBP7.61□□□□□ -1.19
VPS11-207ENST00000620429 RBMY1A1P0DJD3 496 aaKnown RBP7.61□□□□□ -1.19
VPS11-207ENST00000620429 RBMY1CP0DJD4 496 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 RBMY1FQ15415 496 aaKnown RBP7.61□□□□□ -1.19
VPS11-207ENST00000620429 C6orf226Q5I0X4 101 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 VSIG2Q96IQ7 327 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 PHLDA3Q9Y5J5 127 aa7.61□□□□□ -1.19
VPS11-207ENST00000620429 A0A0J9YXV3 536 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 C19orf84I3L1E1 186 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 LINC00315P59091 139 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 FAM110DQ8TAY7 271 aaPredicted RBP7.6□□□□□ -1.19
VPS11-207ENST00000620429 KIF25-AS1Q9Y6Z4 181 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 ZFHX3Q15911 3703 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 IGHV1-58A0A0C4DH39 117 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 GHRHP01286 108 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 ZFP36P26651 326 aaKnown RBP7.6□□□□□ -1.19
VPS11-207ENST00000620429 Q8N9W7 124 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 BRK1Q8WUW1 75 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 LINC00846Q9NV44 126 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 LENEPQ9Y5L5 61 aa7.6□□□□□ -1.19
VPS11-207ENST00000620429 CCDC140Q96MF4 163 aa7.59□□□□□ -1.19
VPS11-207ENST00000620429 TRBV6-5A0A0K0K1A5 114 aa7.59□□□□□ -1.19
VPS11-207ENST00000620429 A0A0U1RQV1 116 aa7.59□□□□□ -1.19
VPS11-207ENST00000620429 ATP6V0E1O15342 81 aa7.59□□□□□ -1.19
VPS11-207ENST00000620429 NXPH4O95158 308 aa7.59□□□□□ -1.19
VPS11-207ENST00000620429 HIST2H2BCQ6DN03 193 aa7.59□□□□□ -1.19
VPS11-207ENST00000620429 C20orf197Q8N268 126 aa7.59□□□□□ -1.19
VPS11-207ENST00000620429 Q8N2B8 174 aa7.59□□□□□ -1.19
VPS11-207ENST00000620429 ITLN2Q8WWU7 325 aaPredicted RBP7.59□□□□□ -1.19
VPS11-207ENST00000620429 MYO9AB2RTY4 2548 aa7.59□□□□□ -1.19
VPS11-207ENST00000620429 G3V318 75 aa7.58□□□□□ -1.2
VPS11-207ENST00000620429 DEFB104AQ8WTQ1 72 aa7.58□□□□□ -1.2
VPS11-207ENST00000620429 OPRPNQ99935 248 aaPredicted RBP7.58□□□□□ -1.2
VPS11-207ENST00000620429 TEX15Q9BXT5 2789 aa7.58□□□□□ -1.2
VPS11-207ENST00000620429 OBSCN-AS1Q96MR7 158 aa7.58□□□□□ -1.2
VPS11-207ENST00000620429 MAP1AP78559 2803 aaPredicted RBP7.58□□□□□ -1.2
VPS11-207ENST00000620429 LYPD5Q6UWN5 251 aa7.58□□□□□ -1.2
VPS11-207ENST00000620429 CELSR1Q9NYQ6 3014 aa7.57□□□□□ -1.2
VPS11-207ENST00000620429 SIRPDQ9H106 197 aa7.57□□□□□ -1.2
VPS11-207ENST00000620429 TRAV21A0A0B4J279 112 aa7.57□□□□□ -1.2
VPS11-207ENST00000620429 RNASE4P34096 147 aaKnown RBP7.57□□□□□ -1.2
VPS11-207ENST00000620429 DEFB1P60022 68 aa7.57□□□□□ -1.2
VPS11-207ENST00000620429 MINOS1Q5TGZ0 78 aa7.57□□□□□ -1.2
VPS11-207ENST00000620429 SUMO4Q6EEV6 95 aa7.57□□□□□ -1.2
VPS11-207ENST00000620429 MINOS1-NBL1R4GNA1 71 aa7.57□□□□□ -1.2
VPS11-207ENST00000620429 IGLV4-3A0A075B6K6 122 aa7.56□□□□□ -1.2
VPS11-207ENST00000620429 BCE1O60756 84 aa7.56□□□□□ -1.2
VPS11-207ENST00000620429 ATP5EP2Q5VTU8 51 aa7.56□□□□□ -1.2
VPS11-207ENST00000620429 ZFAND2AQ8N6M9 145 aa7.56□□□□□ -1.2
VPS11-207ENST00000620429 LINC00482Q8N8I6 264 aa7.56□□□□□ -1.2
VPS11-207ENST00000620429 RPL28P46779 137 aaKnown RBP7.56□□□□□ -1.2
VPS11-207ENST00000620429 KLKP1Q107X0 134 aa7.56□□□□□ -1.2
VPS11-207ENST00000620429 FAM19A1Q7Z5A9 133 aa7.56□□□□□ -1.2
VPS11-207ENST00000620429 FAM218AQ96MZ4 157 aa7.56□□□□□ -1.2
VPS11-207ENST00000620429 UTP20O75691 2785 aaKnown RBP7.55□□□□□ -1.2
VPS11-207ENST00000620429 GNRH2O43555 120 aa7.55□□□□□ -1.2
VPS11-207ENST00000620429 C20orf203Q8NBC4 194 aa7.55□□□□□ -1.2
VPS11-207ENST00000620429 U3KQE9 123 aa7.55□□□□□ -1.2
VPS11-207ENST00000620429 TRBV12-3P01733 135 aa7.55□□□□□ -1.2
VPS11-207ENST00000620429 RNASE3P12724 160 aaKnown RBP7.55□□□□□ -1.2
VPS11-207ENST00000620429 MUC4Q99102 2169 aa7.54□□□□□ -1.2
VPS11-207ENST00000620429 S100A7L2Q5SY68 101 aa7.54□□□□□ -1.2
VPS11-207ENST00000620429 LINC00308Q8TCZ7 52 aa7.54□□□□□ -1.2
VPS11-207ENST00000620429 BPESC1Q9GZL8 116 aa7.54□□□□□ -1.2
VPS11-207ENST00000620429 C14orf132Q9NPU4 83 aa7.54□□□□□ -1.2
VPS11-207ENST00000620429 OVOL2Q9BRP0 275 aa7.53□□□□□ -1.2
VPS11-207ENST00000620429 CCKP06307 115 aa7.53□□□□□ -1.2
VPS11-207ENST00000620429 HILS1P60008 231 aa7.53□□□□□ -1.2
VPS11-207ENST00000620429 IL17DQ8TAD2 202 aa7.53□□□□□ -1.2
VPS11-207ENST00000620429 CSMD2Q7Z408 3487 aa7.53□□□□□ -1.2
VPS11-207ENST00000620429 TRAV7A0A075B6U4 112 aa7.52□□□□□ -1.21
VPS11-207ENST00000620429 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.21
VPS11-207ENST00000620429 F6UB75 175 aa7.52□□□□□ -1.21
VPS11-207ENST00000620429 ATP5EP56381 51 aaPredicted RBP7.52□□□□□ -1.21
VPS11-207ENST00000620429 RPL11P62913 178 aaKnown RBP7.52□□□□□ -1.21
VPS11-207ENST00000620429 CFHR3Q02985 330 aa7.52□□□□□ -1.21
VPS11-207ENST00000620429 CIRBPQ14011 172 aaKnown RBP7.52□□□□□ -1.21
VPS11-207ENST00000620429 KLK9Q2XQG4 91 aa7.52□□□□□ -1.21
VPS11-207ENST00000620429 KLK9Q9UKQ9 250 aa7.52□□□□□ -1.21
VPS11-207ENST00000620429 SPG11Q96JI7 2443 aa7.52□□□□□ -1.21
VPS11-207ENST00000620429 IGKV3-7A0A075B6H7 116 aa7.52□□□□□ -1.21
VPS11-207ENST00000620429 TRAV23DV6A0A075B6W5 121 aa7.52□□□□□ -1.21
VPS11-207ENST00000620429 TRBV7-6A0A0J9YX20 115 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms