RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 NPC2P61916 151 aa13.84□□□□□ -0.19
PCDHGB3-202ENST00000618934 PDZD2O15018 2839 aa13.83□□□□□ -0.19
PCDHGB3-202ENST00000618934 TRGV1A0A0A0MS02 117 aa13.83□□□□□ -0.19
PCDHGB3-202ENST00000618934 CCL24O00175 119 aa13.83□□□□□ -0.19
PCDHGB3-202ENST00000618934 PRSS2P07478 247 aa13.83□□□□□ -0.19
PCDHGB3-202ENST00000618934 ATP6V0E2Q8NHE4 81 aa13.83□□□□□ -0.19
PCDHGB3-202ENST00000618934 ERG28Q9UKR5 140 aa13.83□□□□□ -0.19
PCDHGB3-202ENST00000618934 A0A0B4J2C4 111 aa13.83□□□□□ -0.2
PCDHGB3-202ENST00000618934 COX6A2Q02221 97 aa13.83□□□□□ -0.2
PCDHGB3-202ENST00000618934 DNAJC30Q96LL9 226 aa13.83□□□□□ -0.2
PCDHGB3-202ENST00000618934 CDKN2A-AS1Q9UH64 79 aa13.83□□□□□ -0.2
PCDHGB3-202ENST00000618934 LINC00694P0DN24 101 aa13.82□□□□□ -0.2
PCDHGB3-202ENST00000618934 TRBV20-1A0A075B6N2 111 aa13.82□□□□□ -0.2
PCDHGB3-202ENST00000618934 NDUFA7O95182 113 aa13.82□□□□□ -0.2
PCDHGB3-202ENST00000618934 LYRM7Q5U5X0 104 aa13.82□□□□□ -0.2
PCDHGB3-202ENST00000618934 Q6ZTI0 123 aa13.82□□□□□ -0.2
PCDHGB3-202ENST00000618934 CITED2Q99967 270 aaPredicted RBP13.82□□□□□ -0.2
PCDHGB3-202ENST00000618934 ITPR2Q14571 2701 aa13.82□□□□□ -0.2
PCDHGB3-202ENST00000618934 SBSPONQ8IVN8 264 aa13.81□□□□□ -0.2
PCDHGB3-202ENST00000618934 TMEM86BQ8N661 226 aa13.81□□□□□ -0.2
PCDHGB3-202ENST00000618934 IL17DQ8TAD2 202 aa13.81□□□□□ -0.2
PCDHGB3-202ENST00000618934 WFDC10AQ9H1F0 79 aa13.8□□□□□ -0.2
PCDHGB3-202ENST00000618934 GEMIN7Q9H840 131 aaKnown RBP13.8□□□□□ -0.2
PCDHGB3-202ENST00000618934 DAND5Q8N907 189 aa13.79□□□□□ -0.2
PCDHGB3-202ENST00000618934 CLUHP3Q96NS8 147 aa13.79□□□□□ -0.2
PCDHGB3-202ENST00000618934 TEN1Q86WV5 123 aa13.79□□□□□ -0.2
PCDHGB3-202ENST00000618934 GIG44P09565 113 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB3-202ENST00000618934 NTM-AS1Q6ZSK4 140 aa13.78□□□□□ -0.2
PCDHGB3-202ENST00000618934 ANKRD29Q8N6D5 301 aa13.78□□□□□ -0.2
PCDHGB3-202ENST00000618934 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB3-202ENST00000618934 TRAV25A0A0B4J276 109 aa13.78□□□□□ -0.2
PCDHGB3-202ENST00000618934 C9JAW5 83 aa13.78□□□□□ -0.2
PCDHGB3-202ENST00000618934 Q1RN00 199 aa13.78□□□□□ -0.2
PCDHGB3-202ENST00000618934 TMEM101Q96IK0 257 aa13.78□□□□□ -0.2
PCDHGB3-202ENST00000618934 A0A1B0GV72 72 aa13.77□□□□□ -0.21
PCDHGB3-202ENST00000618934 MT-ATP8P03928 68 aa13.76□□□□□ -0.21
PCDHGB3-202ENST00000618934 ZFAND6Q6FIF0 208 aa13.76□□□□□ -0.21
PCDHGB3-202ENST00000618934 DGAT2L7PQ6IED9 249 aa13.76□□□□□ -0.21
PCDHGB3-202ENST00000618934 PPDPFLQ8WWR9 84 aa13.76□□□□□ -0.21
PCDHGB3-202ENST00000618934 SPANXDQ9BXN6 97 aa13.76□□□□□ -0.21
PCDHGB3-202ENST00000618934 SPANXCQ9NY87 97 aa13.76□□□□□ -0.21
PCDHGB3-202ENST00000618934 TRIAP1O43715 76 aa13.76□□□□□ -0.21
PCDHGB3-202ENST00000618934 PLA2G2AP14555 144 aa13.76□□□□□ -0.21
PCDHGB3-202ENST00000618934 CKS1BP61024 79 aa13.75□□□□□ -0.21
PCDHGB3-202ENST00000618934 MIAQ16674 131 aa13.75□□□□□ -0.21
PCDHGB3-202ENST00000618934 NOP10Q9NPE3 64 aaKnown RBP13.75□□□□□ -0.21
PCDHGB3-202ENST00000618934 SLC25A20O43772 301 aa13.75□□□□□ -0.21
PCDHGB3-202ENST00000618934 XGP55808 180 aa13.75□□□□□ -0.21
PCDHGB3-202ENST00000618934 LINC00242Q5T6M2 205 aa13.75□□□□□ -0.21
PCDHGB3-202ENST00000618934 IGLV5-45A0A087WSX0 123 aa13.74□□□□□ -0.21
PCDHGB3-202ENST00000618934 TIRAPP58753 221 aa13.74□□□□□ -0.21
PCDHGB3-202ENST00000618934 KRTAP1-1Q07627 177 aa13.74□□□□□ -0.21
PCDHGB3-202ENST00000618934 GAGE12JA6NER3 117 aa13.73□□□□□ -0.21
PCDHGB3-202ENST00000618934 GAGE4Q13068 117 aa13.73□□□□□ -0.21
PCDHGB3-202ENST00000618934 GAGE5Q13069 117 aa13.73□□□□□ -0.21
PCDHGB3-202ENST00000618934 LINC01006Q8NI28 216 aa13.73□□□□□ -0.21
PCDHGB3-202ENST00000618934 K7EQD1 137 aa13.73□□□□□ -0.21
PCDHGB3-202ENST00000618934 ZNF625Q96I27 306 aaPredicted RBP13.72□□□□□ -0.21
PCDHGB3-202ENST00000618934 TRAV13-1A0A0B4J241 112 aa13.72□□□□□ -0.21
PCDHGB3-202ENST00000618934 RPL35AP18077 110 aaKnown RBP13.72□□□□□ -0.21
PCDHGB3-202ENST00000618934 LOC100131303A0A0U1RQF7 123 aa13.71□□□□□ -0.21
PCDHGB3-202ENST00000618934 PLAC8L1A1L4L8 177 aa13.71□□□□□ -0.21
PCDHGB3-202ENST00000618934 TRBV30A0A0K0K1B3 111 aa13.71□□□□□ -0.22
PCDHGB3-202ENST00000618934 A0A0U1RRA0 63 aa13.71□□□□□ -0.22
PCDHGB3-202ENST00000618934 RPL36AP83881 106 aaKnown RBP13.71□□□□□ -0.22
PCDHGB3-202ENST00000618934 RPL36ALQ969Q0 106 aaKnown RBP13.71□□□□□ -0.22
PCDHGB3-202ENST00000618934 NDUFA1O15239 70 aa13.7□□□□□ -0.22
PCDHGB3-202ENST00000618934 TRAV4A0A0B4J268 109 aa13.69□□□□□ -0.22
PCDHGB3-202ENST00000618934 LINC01620Q4KN68 170 aa13.69□□□□□ -0.22
PCDHGB3-202ENST00000618934 Q9H8V8 135 aa13.69□□□□□ -0.22
PCDHGB3-202ENST00000618934 ICOSQ9Y6W8 199 aa13.69□□□□□ -0.22
PCDHGB3-202ENST00000618934 IGLV5-39A0A0G2JS06 123 aa13.69□□□□□ -0.22
PCDHGB3-202ENST00000618934 C19orf73Q9NVV2 129 aa13.69□□□□□ -0.22
PCDHGB3-202ENST00000618934 GAGE7O76087 117 aa13.68□□□□□ -0.22
PCDHGB3-202ENST00000618934 GAGE12FP0CL80 117 aa13.68□□□□□ -0.22
PCDHGB3-202ENST00000618934 GAGE12GP0CL81 117 aa13.68□□□□□ -0.22
PCDHGB3-202ENST00000618934 GAGE12IP0CL82 117 aa13.68□□□□□ -0.22
PCDHGB3-202ENST00000618934 SMIM1B2RUZ4 78 aa13.68□□□□□ -0.22
PCDHGB3-202ENST00000618934 ATXN8Q156A1 80 aa13.68□□□□□ -0.22
PCDHGB3-202ENST00000618934 YAE1D1Q9NRH1 226 aa13.68□□□□□ -0.22
PCDHGB3-202ENST00000618934 TRBV10-1A0A0K0K1A3 114 aa13.67□□□□□ -0.22
PCDHGB3-202ENST00000618934 CLEC2BQ92478 149 aa13.67□□□□□ -0.22
PCDHGB3-202ENST00000618934 CDC42SE2Q9NRR3 84 aa13.67□□□□□ -0.22
PCDHGB3-202ENST00000618934 HERVK_113P63121 156 aa13.66□□□□□ -0.22
PCDHGB3-202ENST00000618934 DAZ2Q13117 558 aaKnown RBP13.66□□□□□ -0.22
PCDHGB3-202ENST00000618934 DAZ4Q86SG3 579 aaKnown RBP13.66□□□□□ -0.22
PCDHGB3-202ENST00000618934 DAZ3Q9NR90 486 aaKnown RBP13.66□□□□□ -0.22
PCDHGB3-202ENST00000618934 FN1P02751 2386 aaKnown RBP13.66□□□□□ -0.22
PCDHGB3-202ENST00000618934 TIMM17BO60830 172 aa13.65□□□□□ -0.22
PCDHGB3-202ENST00000618934 NTN5Q8WTR8 489 aaPredicted RBP13.65□□□□□ -0.22
PCDHGB3-202ENST00000618934 RPL13AP40429 203 aaKnown RBP13.65□□□□□ -0.22
PCDHGB3-202ENST00000618934 NBEAL2Q6ZNJ1 2754 aa13.65□□□□□ -0.22
PCDHGB3-202ENST00000618934 CSDC2Q9Y534 153 aaKnown RBP13.64□□□□□ -0.23
PCDHGB3-202ENST00000618934 F5H768 121 aa13.64□□□□□ -0.23
PCDHGB3-202ENST00000618934 IGLV1-51P01701 117 aa13.64□□□□□ -0.23
PCDHGB3-202ENST00000618934 SOSTDC1Q6X4U4 206 aa13.64□□□□□ -0.23
PCDHGB3-202ENST00000618934 FAM19A3Q7Z5A8 133 aa13.64□□□□□ -0.23
PCDHGB3-202ENST00000618934 CSNK1G2-AS1Q8NCQ2 148 aa13.64□□□□□ -0.23
PCDHGB3-202ENST00000618934 TRGV2A0A075B6R0 118 aa13.63□□□□□ -0.23
PCDHGB3-202ENST00000618934 LINC00308Q8TCZ7 52 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms