RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 J3QQQ9 107 aa12.5□□□□□ -0.41
CNOT3-209ENST00000617930 RHODO00212 210 aa12.5□□□□□ -0.41
CNOT3-209ENST00000617930 ETDBQ3ZM63 59 aa12.5□□□□□ -0.41
CNOT3-209ENST00000617930 NFE4Q86UQ8 179 aa12.5□□□□□ -0.41
CNOT3-209ENST00000617930 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
CNOT3-209ENST00000617930 LOC107984156A0A0G2JMH3 177 aa12.49□□□□□ -0.41
CNOT3-209ENST00000617930 SH2D6Q7Z4S9 175 aa12.49□□□□□ -0.41
CNOT3-209ENST00000617930 ARL17AQ8IVW1 177 aa12.49□□□□□ -0.41
CNOT3-209ENST00000617930 INSL3P51460 131 aa12.49□□□□□ -0.41
CNOT3-209ENST00000617930 DAZ2Q13117 558 aaKnown RBP12.49□□□□□ -0.41
CNOT3-209ENST00000617930 LYRM7Q5U5X0 104 aa12.49□□□□□ -0.41
CNOT3-209ENST00000617930 CEMP1Q6PRD7 247 aaPredicted RBP12.49□□□□□ -0.41
CNOT3-209ENST00000617930 C3orf56Q8N813 242 aa12.49□□□□□ -0.41
CNOT3-209ENST00000617930 CHCHD7Q9BUK0 85 aa12.49□□□□□ -0.41
CNOT3-209ENST00000617930 PRO0461Q9UI25 63 aa12.49□□□□□ -0.41
CNOT3-209ENST00000617930 LEPROTO15243 131 aa12.47□□□□□ -0.41
CNOT3-209ENST00000617930 IGHV3-30P01768 117 aa12.47□□□□□ -0.41
CNOT3-209ENST00000617930 IGHV3-30-5P0DP03 117 aa12.47□□□□□ -0.41
CNOT3-209ENST00000617930 SFTA2Q6UW10 78 aa12.47□□□□□ -0.41
CNOT3-209ENST00000617930 SLC25A29Q8N8R3 303 aa12.47□□□□□ -0.41
CNOT3-209ENST00000617930 DNAH3Q8TD57 4116 aa12.47□□□□□ -0.41
CNOT3-209ENST00000617930 TMEM223A0PJW6 202 aa12.47□□□□□ -0.41
CNOT3-209ENST00000617930 PSMB2P49721 201 aa12.47□□□□□ -0.41
CNOT3-209ENST00000617930 IGLV4-3A0A075B6K6 122 aa12.46□□□□□ -0.41
CNOT3-209ENST00000617930 VCX2Q9H322 139 aa12.46□□□□□ -0.41
CNOT3-209ENST00000617930 WIPF1O43516 503 aa12.45□□□□□ -0.42
CNOT3-209ENST00000617930 OXLD1Q5BKU9 147 aa12.45□□□□□ -0.42
CNOT3-209ENST00000617930 C16orf74Q96GX8 76 aa12.45□□□□□ -0.42
CNOT3-209ENST00000617930 C1QTNF4Q9BXJ3 329 aa12.45□□□□□ -0.42
CNOT3-209ENST00000617930 NBEAL2Q6ZNJ1 2754 aa12.45□□□□□ -0.42
CNOT3-209ENST00000617930 IGHV3-64A0A075B6Q5 118 aa12.45□□□□□ -0.42
CNOT3-209ENST00000617930 ZNF22P17026 224 aaPredicted RBP12.45□□□□□ -0.42
CNOT3-209ENST00000617930 SHISA2Q6UWI4 295 aa12.45□□□□□ -0.42
CNOT3-209ENST00000617930 AMELXQ99217 191 aa12.45□□□□□ -0.42
CNOT3-209ENST00000617930 OVOL2Q9BRP0 275 aa12.45□□□□□ -0.42
CNOT3-209ENST00000617930 TRAV4A0A0B4J268 109 aa12.44□□□□□ -0.42
CNOT3-209ENST00000617930 GAGE7O76087 117 aa12.44□□□□□ -0.42
CNOT3-209ENST00000617930 GAGE12FP0CL80 117 aa12.44□□□□□ -0.42
CNOT3-209ENST00000617930 GAGE12GP0CL81 117 aa12.44□□□□□ -0.42
CNOT3-209ENST00000617930 GAGE12IP0CL82 117 aa12.44□□□□□ -0.42
CNOT3-209ENST00000617930 DNAJC30Q96LL9 226 aa12.44□□□□□ -0.42
CNOT3-209ENST00000617930 A0A0J9YXV3 536 aa12.44□□□□□ -0.42
CNOT3-209ENST00000617930 UBE2D3P61077 147 aa12.44□□□□□ -0.42
CNOT3-209ENST00000617930 UBE2D2P62837 147 aa12.44□□□□□ -0.42
CNOT3-209ENST00000617930 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.43□□□□□ -0.42
CNOT3-209ENST00000617930 IGKV2-29A2NJV5 120 aaPredicted RBP12.43□□□□□ -0.42
CNOT3-209ENST00000617930 CFC1BP0CG36 223 aa12.42□□□□□ -0.42
CNOT3-209ENST00000617930 CFC1P0CG37 223 aa12.42□□□□□ -0.42
CNOT3-209ENST00000617930 PYGO1Q9Y3Y4 419 aa12.42□□□□□ -0.42
CNOT3-209ENST00000617930 GAGE12HA6NDE8 117 aa12.42□□□□□ -0.42
CNOT3-209ENST00000617930 RNASE13Q5GAN3 156 aaKnown RBP12.42□□□□□ -0.42
CNOT3-209ENST00000617930 UBE2D4Q9Y2X8 147 aa12.42□□□□□ -0.42
CNOT3-209ENST00000617930 KRTAP10-11P60412 298 aa12.41□□□□□ -0.42
CNOT3-209ENST00000617930 C10orf126Q8N4M7 172 aa12.41□□□□□ -0.42
CNOT3-209ENST00000617930 SIGMAR1Q99720 223 aa12.41□□□□□ -0.42
CNOT3-209ENST00000617930 TMEM238C9JI98 176 aa12.4□□□□□ -0.42
CNOT3-209ENST00000617930 K7EQD1 137 aa12.4□□□□□ -0.42
CNOT3-209ENST00000617930 NTM-AS1Q6ZSK4 140 aa12.4□□□□□ -0.42
CNOT3-209ENST00000617930 MDFIQ99750 246 aa12.4□□□□□ -0.42
CNOT3-209ENST00000617930 GTSF1LQ9H1H1 148 aa12.4□□□□□ -0.42
CNOT3-209ENST00000617930 PRO1854Q9UHT4 67 aa12.4□□□□□ -0.42
CNOT3-209ENST00000617930 X6R8D5 127 aa12.4□□□□□ -0.42
CNOT3-209ENST00000617930 LOC100131303A0A0U1RQF7 123 aa12.4□□□□□ -0.42
CNOT3-209ENST00000617930 ATP6V0E2Q8NHE4 81 aa12.4□□□□□ -0.42
CNOT3-209ENST00000617930 TRBV20-1A0A075B6N2 111 aa12.38□□□□□ -0.43
CNOT3-209ENST00000617930 TRGV2A0A075B6R0 118 aa12.38□□□□□ -0.43
CNOT3-209ENST00000617930 SCGB1C2P0DMR2 95 aa12.38□□□□□ -0.43
CNOT3-209ENST00000617930 SPATA25Q9BR10 227 aa12.38□□□□□ -0.43
CNOT3-209ENST00000617930 TIMM21Q9BVV7 248 aa12.38□□□□□ -0.43
CNOT3-209ENST00000617930 A4D1N5 150 aa12.38□□□□□ -0.43
CNOT3-209ENST00000617930 TCL1BO95988 128 aa12.38□□□□□ -0.43
CNOT3-209ENST00000617930 SMCPP49901 116 aaPredicted RBP12.38□□□□□ -0.43
CNOT3-209ENST00000617930 TRBV10-1A0A0K0K1A3 114 aa12.37□□□□□ -0.43
CNOT3-209ENST00000617930 GAGE12JA6NER3 117 aa12.37□□□□□ -0.43
CNOT3-209ENST00000617930 LINC00694P0DN24 101 aa12.37□□□□□ -0.43
CNOT3-209ENST00000617930 GAGE4Q13068 117 aa12.37□□□□□ -0.43
CNOT3-209ENST00000617930 GAGE5Q13069 117 aa12.37□□□□□ -0.43
CNOT3-209ENST00000617930 FOXI1Q12951 378 aa12.37□□□□□ -0.43
CNOT3-209ENST00000617930 FHL2Q14192 279 aa12.37□□□□□ -0.43
CNOT3-209ENST00000617930 CRYBA4P53673 196 aa12.36□□□□□ -0.43
CNOT3-209ENST00000617930 SMAGPQ0VAQ4 97 aa12.36□□□□□ -0.43
CNOT3-209ENST00000617930 Q6ZUT4 128 aa12.36□□□□□ -0.43
CNOT3-209ENST00000617930 MUSTN1Q8IVN3 82 aa12.36□□□□□ -0.43
CNOT3-209ENST00000617930 IGHV3-30-3P0DP02 117 aa12.35□□□□□ -0.43
CNOT3-209ENST00000617930 A0A0J9YXY3 114 aa12.35□□□□□ -0.43
CNOT3-209ENST00000617930 SCGB1A1P11684 91 aa12.35□□□□□ -0.43
CNOT3-209ENST00000617930 MRPS36P82909 103 aaKnown RBP12.35□□□□□ -0.43
CNOT3-209ENST00000617930 RPL36AP83881 106 aaKnown RBP12.35□□□□□ -0.43
CNOT3-209ENST00000617930 RPL36ALQ969Q0 106 aaKnown RBP12.35□□□□□ -0.43
CNOT3-209ENST00000617930 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.34□□□□□ -0.43
CNOT3-209ENST00000617930 A0A0B4J2C4 111 aa12.34□□□□□ -0.43
CNOT3-209ENST00000617930 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
CNOT3-209ENST00000617930 SPANXA1Q9NS26 97 aa12.34□□□□□ -0.43
CNOT3-209ENST00000617930 SBSPONQ8IVN8 264 aa12.33□□□□□ -0.43
CNOT3-209ENST00000617930 ERG28Q9UKR5 140 aa12.33□□□□□ -0.43
CNOT3-209ENST00000617930 NOTCH1P46531 2555 aa12.33□□□□□ -0.44
CNOT3-209ENST00000617930 TRBV6-4A0A1B0GX49 114 aa12.33□□□□□ -0.44
CNOT3-209ENST00000617930 H7C2G1 150 aa12.33□□□□□ -0.44
CNOT3-209ENST00000617930 DEFB130BP0DP73 79 aa12.33□□□□□ -0.44
CNOT3-209ENST00000617930 DEFB130AP0DP74 79 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms