RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 IGHV3-73A0A0B4J1V6 119 aa5.58□□□□□ -1.52
MALAT1-208ENST00000616527 LYRM9A8MSI8 78 aa5.58□□□□□ -1.52
MALAT1-208ENST00000616527 A8MZ25 164 aa5.58□□□□□ -1.52
MALAT1-208ENST00000616527 DGAT2L7PQ6IED9 249 aa5.58□□□□□ -1.52
MALAT1-208ENST00000616527 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
MALAT1-208ENST00000616527 PCP2Q8IVA1 136 aa5.58□□□□□ -1.52
MALAT1-208ENST00000616527 OR11H2Q8NH07 326 aa5.58□□□□□ -1.52
MALAT1-208ENST00000616527 VCX2Q9H322 139 aa5.58□□□□□ -1.52
MALAT1-208ENST00000616527 NOTCH3Q9UM47 2321 aa5.58□□□□□ -1.52
MALAT1-208ENST00000616527 A0A1B0GV90 55 aa5.57□□□□□ -1.52
MALAT1-208ENST00000616527 LINC00694P0DN24 101 aa5.57□□□□□ -1.52
MALAT1-208ENST00000616527 NMUP48645 174 aa5.57□□□□□ -1.52
MALAT1-208ENST00000616527 HINT1P49773 126 aaPredicted RBP5.57□□□□□ -1.52
MALAT1-208ENST00000616527 MPV17L2Q567V2 206 aa5.57□□□□□ -1.52
MALAT1-208ENST00000616527 FAM19A3Q7Z5A8 133 aa5.57□□□□□ -1.52
MALAT1-208ENST00000616527 SLC25A29Q8N8R3 303 aa5.57□□□□□ -1.52
MALAT1-208ENST00000616527 FAM104AQ969W3 186 aa5.57□□□□□ -1.52
MALAT1-208ENST00000616527 UBE2D4Q9Y2X8 147 aa5.57□□□□□ -1.52
MALAT1-208ENST00000616527 NACAE9PAV3 2078 aa5.56□□□□□ -1.52
MALAT1-208ENST00000616527 TRBV25-1A0A075B6N4 114 aa5.56□□□□□ -1.52
MALAT1-208ENST00000616527 TRGV2A0A075B6R0 118 aa5.56□□□□□ -1.52
MALAT1-208ENST00000616527 MYMXA0A1B0GTQ4 84 aa5.56□□□□□ -1.52
MALAT1-208ENST00000616527 GAGE1Q13065 139 aa5.56□□□□□ -1.52
MALAT1-208ENST00000616527 SBSPONQ8IVN8 264 aa5.56□□□□□ -1.52
MALAT1-208ENST00000616527 ZNRF2Q8NHG8 242 aa5.56□□□□□ -1.52
MALAT1-208ENST00000616527 ORAOV1Q8WV07 137 aa5.56□□□□□ -1.52
MALAT1-208ENST00000616527 PRADC1Q9BSG0 188 aa5.56□□□□□ -1.52
MALAT1-208ENST00000616527 TM2D2Q9BX73 214 aa5.56□□□□□ -1.52
MALAT1-208ENST00000616527 TINCRA0A1B0GVN0 87 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 A6NDN8 102 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 GAGE7O76087 117 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 GAGE12FP0CL80 117 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 GAGE12GP0CL81 117 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 GAGE12IP0CL82 117 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 MIFP14174 115 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 EGFEM1PQ0D2K5 195 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 KRTAP24-1Q3LI83 254 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 SPATA3Q8NHX4 192 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 Q9UF83 564 aa5.55□□□□□ -1.52
MALAT1-208ENST00000616527 IGLV5-45A0A087WSX0 123 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 TRGV4A0A0C4DH28 118 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 TEX48A0A1B0GUV7 120 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 TMEM223A0PJW6 202 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 LEPROTO15243 131 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 ZNF25P17030 456 aaPredicted RBP5.54□□□□□ -1.52
MALAT1-208ENST00000616527 FOXI1Q12951 378 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 BATFQ16520 125 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 MAPKAPK5-AS1Q8N8E1 139 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 PLEKHB2Q96CS7 222 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 RNF183Q96D59 192 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 CHAC1Q9BUX1 264 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 COX11Q9Y6N1 276 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 ATRQ13535 2644 aa5.54□□□□□ -1.52
MALAT1-208ENST00000616527 TEP1Q99973 2627 aaKnown RBP5.53□□□□□ -1.52
MALAT1-208ENST00000616527 TRAV8-6A0A0B4J262 113 aa5.53□□□□□ -1.52
MALAT1-208ENST00000616527 H3BRM9 83 aa5.53□□□□□ -1.52
MALAT1-208ENST00000616527 ZNF22P17026 224 aaPredicted RBP5.53□□□□□ -1.52
MALAT1-208ENST00000616527 UBE2D1P51668 147 aa5.53□□□□□ -1.52
MALAT1-208ENST00000616527 NTM-AS1Q6ZSK4 140 aa5.53□□□□□ -1.52
MALAT1-208ENST00000616527 LINC00476Q8WZB0 136 aa5.53□□□□□ -1.52
MALAT1-208ENST00000616527 TMEM243Q9BU79 118 aa5.53□□□□□ -1.52
MALAT1-208ENST00000616527 TP73-AS1Q9UF72 201 aa5.53□□□□□ -1.52
MALAT1-208ENST00000616527 GAGE12JA6NER3 117 aa5.52□□□□□ -1.53
MALAT1-208ENST00000616527 TAX1BP3O14907 124 aa5.52□□□□□ -1.53
MALAT1-208ENST00000616527 IGHV4-30-4P0DP06 118 aa5.52□□□□□ -1.53
MALAT1-208ENST00000616527 GAGE4Q13068 117 aa5.52□□□□□ -1.53
MALAT1-208ENST00000616527 GAGE5Q13069 117 aa5.52□□□□□ -1.53
MALAT1-208ENST00000616527 TMEM170BQ5T4T1 132 aa5.52□□□□□ -1.53
MALAT1-208ENST00000616527 CEND1Q8N111 149 aa5.52□□□□□ -1.53
MALAT1-208ENST00000616527 C3orf56Q8N813 242 aa5.52□□□□□ -1.53
MALAT1-208ENST00000616527 Q8NAQ8 132 aa5.52□□□□□ -1.53
MALAT1-208ENST00000616527 PHLDA1Q8WV24 401 aaPredicted RBP5.52□□□□□ -1.53
MALAT1-208ENST00000616527 OPRPNQ99935 248 aaPredicted RBP5.52□□□□□ -1.53
MALAT1-208ENST00000616527 SPANXB1Q9NS25 103 aaPredicted RBP5.52□□□□□ -1.53
MALAT1-208ENST00000616527 PRO0255Q9UI72 69 aa5.52□□□□□ -1.53
MALAT1-208ENST00000616527 CUBNO60494 3623 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.51□□□□□ -1.53
MALAT1-208ENST00000616527 TRAV26-1A0A087WT03 109 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 TRBV6-8A0A0A6YYG3 113 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 IGHV3-38A0A0C4DH36 116 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 A0A0J9YXV3 536 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 A0A1B0GWB2 263 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 IGKV2-29A2NJV5 120 aaPredicted RBP5.51□□□□□ -1.53
MALAT1-208ENST00000616527 ZNF815PA8K554 130 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 J3QQQ9 107 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 HERVK_113P63121 156 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 Q6ZUT4 128 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 OR5A1Q8NGJ0 315 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 CDC42SE2Q9NRR3 84 aa5.51□□□□□ -1.53
MALAT1-208ENST00000616527 IGHV4-28A0A0C4DH34 117 aa5.5□□□□□ -1.53
MALAT1-208ENST00000616527 IGHV1-58A0A0C4DH39 117 aa5.5□□□□□ -1.53
MALAT1-208ENST00000616527 A0A0J9YY99 117 aa5.5□□□□□ -1.53
MALAT1-208ENST00000616527 A0A1B0GUV1 79 aa5.5□□□□□ -1.53
MALAT1-208ENST00000616527 SPART-AS1P0CW21 52 aa5.5□□□□□ -1.53
MALAT1-208ENST00000616527 LGALS3P17931 250 aaKnown RBP5.5□□□□□ -1.53
MALAT1-208ENST00000616527 FAM222AQ5U5X8 452 aa5.5□□□□□ -1.53
MALAT1-208ENST00000616527 SH2D6Q7Z4S9 175 aa5.5□□□□□ -1.53
MALAT1-208ENST00000616527 DEFB104AQ8WTQ1 72 aa5.5□□□□□ -1.53
MALAT1-208ENST00000616527 TMEM101Q96IK0 257 aa5.5□□□□□ -1.53
MALAT1-208ENST00000616527 TTTY13Q9BZ97 58 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms