RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 ESRGQ1W209 222 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 MPV17LQ2QL34 196 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 KRTAP21-3Q3LHN1 58 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 XAF1Q6GPH4 301 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 SLC48A1Q6P1K1 146 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 CYP2G1PQ6ZSU1 146 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 LINC00269Q8N2A0 174 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 DYNLRB2Q8TF09 96 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 LINC01600Q96MT4 127 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 NXT2Q9NPJ8 142 aaKnown RBP1.57□□□□□ -2.16
NEAT1-205ENST00000616315 NDUFA12Q9UI09 145 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 V9GYH0 126 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 DDX60LQ5H9U9 1706 aaKnown RBP1.57□□□□□ -2.16
NEAT1-205ENST00000616315 BCORQ6W2J9 1755 aa1.57□□□□□ -2.16
NEAT1-205ENST00000616315 TRAV3A0A0B4J244 114 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 TRBV10-3A0A0K0K1G6 114 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 KANTRA0A1W2PQU2 76 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 H7BZZ5 65 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 NDUFC1O43677 76 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 PRB1P04280 392 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 MGST1P10620 155 aaKnown RBP1.56□□□□□ -2.16
NEAT1-205ENST00000616315 SNRPFP62306 86 aaKnown RBP1.56□□□□□ -2.16
NEAT1-205ENST00000616315 C1orf134Q5TEV5 83 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 CASC2Q6XLA1 102 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 VMO1Q7Z5L0 202 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 HIGD1BQ9P298 99 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 LY75O60449 1722 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 RICTORQ6R327 1708 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 PAPPA2Q9BXP8 1791 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 DIDO1Q9BTC0 2240 aaKnown RBP1.56□□□□□ -2.16
NEAT1-205ENST00000616315 FN1P02751 2386 aaKnown RBP1.56□□□□□ -2.16
NEAT1-205ENST00000616315 AGLP35573 1532 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 NEXMIFQ5QGS0 1516 aa1.56□□□□□ -2.16
NEAT1-205ENST00000616315 MYO7AQ13402 2215 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 KIAA0100Q14667 2235 aaKnown RBP1.55□□□□□ -2.16
NEAT1-205ENST00000616315 COL4A1P02462 1669 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 IQGAP1P46940 1657 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 SHPRHQ149N8 1683 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 UBR3Q6ZT12 1888 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 TRBV7-1A0A0A6YYK4 115 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 TRAV13-2A0A0B4J235 113 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 PIGBOS1A0A0B4J2F0 54 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 TCRBV4S1A1TA0A5B7 111 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 IGKV2-29A2NJV5 120 aaPredicted RBP1.55□□□□□ -2.16
NEAT1-205ENST00000616315 PRB4P10163 310 aaPredicted RBP1.55□□□□□ -2.16
NEAT1-205ENST00000616315 UBE2D3P61077 147 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 UBE2D2P62837 147 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 KLKP1Q107X0 134 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 C10orf55Q5SWW7 151 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 LYPD5Q6UWN5 251 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 ZCCHC23Q6ZST2 131 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 TMEM141Q96I45 108 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 SMIM7Q9BQ49 75 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 MYOFQ9NZM1 2061 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 CD163L1Q9NR16 1453 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 ZNF831Q5JPB2 1677 aa1.55□□□□□ -2.16
NEAT1-205ENST00000616315 NRAPQ86VF7 1730 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 ZFHX3Q15911 3703 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 LOC107984156A0A0G2JMH3 177 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 A0A0G2JND7 137 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 TMEM170BQ5T4T1 132 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 UNQ6190/PRO20217Q6UXQ8 127 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 ARL17AQ8IVW1 177 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 C14orf132Q9NPU4 83 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 CDC42SE1Q9NRR8 79 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 CPS1P31327 1500 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 ZMYM4Q5VZL5 1548 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 NRXN2Q9P2S2 1712 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 SIP14410 1827 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 NINQ8N4C6 2090 aa1.54□□□□□ -2.16
NEAT1-205ENST00000616315 IGKV3D-7A0A0C4DH55 119 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 IGKV3OR2-268A0A0C4DH90 116 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 C2orf70A6NJV1 201 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 COL4A5P29400 1685 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 UBE2G1P62253 170 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 ABCC8Q09428 1581 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 PDE6HQ13956 83 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 QSER1Q2KHR3 1735 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 RPL7L1Q6DKI1 246 aaKnown RBP1.53□□□□□ -2.16
NEAT1-205ENST00000616315 SMIM5Q71RC9 77 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 LINC00643Q86TS7 51 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 FAM223AQ8IWN6 122 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 SPTSSBQ8NFR3 76 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 FAM167A-AS1Q96KT0 104 aa1.53□□□□□ -2.16
NEAT1-205ENST00000616315 DLEC1Q9Y238 1755 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 DOT1LQ8TEK3 1739 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 LRRC37A3O60309 1634 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 LRP6O75581 1613 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 TRBV7-3A0A075B6L6 115 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 FXYD6-FXYD2A0A087WZ82 144 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 ACYP1P07311 99 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 SMIM13P0DJ93 91 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 COX8AP10176 69 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 RNASE3P12724 160 aaKnown RBP1.52□□□□□ -2.17
NEAT1-205ENST00000616315 DSCR4P56555 118 aaPredicted RBP1.52□□□□□ -2.17
NEAT1-205ENST00000616315 Q5VV11 94 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 Q8N6K4 173 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 CYP4F30PQ9H0H9 118 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 FXYD6Q9H0Q3 95 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 MANBALQ9NQG1 85 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms