RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 KLLNB2CW77 178 aa16.12■□□□□ 0.17
POLR2J3-220ENST00000613744 CHCHD5Q9BSY4 110 aa16.12■□□□□ 0.17
POLR2J3-220ENST00000613744 FBN1P35555 2871 aaKnown RBP16.12■□□□□ 0.17
POLR2J3-220ENST00000613744 NDUFA4O00483 81 aa16.11■□□□□ 0.17
POLR2J3-220ENST00000613744 IGHV3-30-3P0DP02 117 aa16.11■□□□□ 0.17
POLR2J3-220ENST00000613744 MIAQ16674 131 aa16.11■□□□□ 0.17
POLR2J3-220ENST00000613744 TRGV11A0A075B6L2 103 aa16.1■□□□□ 0.17
POLR2J3-220ENST00000613744 PF4V1P10720 104 aa16.1■□□□□ 0.17
POLR2J3-220ENST00000613744 TIMM21Q9BVV7 248 aa16.1■□□□□ 0.17
POLR2J3-220ENST00000613744 KRTAP24-1Q3LI83 254 aa16.1■□□□□ 0.17
POLR2J3-220ENST00000613744 DNAJC30Q96LL9 226 aa16.1■□□□□ 0.17
POLR2J3-220ENST00000613744 MUC4Q99102 2169 aa16.1■□□□□ 0.17
POLR2J3-220ENST00000613744 ATRQ13535 2644 aa16.1■□□□□ 0.17
POLR2J3-220ENST00000613744 IGLV4-3A0A075B6K6 122 aa16.09■□□□□ 0.17
POLR2J3-220ENST00000613744 M0QY20 66 aa16.09■□□□□ 0.17
POLR2J3-220ENST00000613744 TIMM17BO60830 172 aa16.09■□□□□ 0.17
POLR2J3-220ENST00000613744 PYGO1Q9Y3Y4 419 aa16.09■□□□□ 0.17
POLR2J3-220ENST00000613744 A0A0J9YXV3 536 aa16.09■□□□□ 0.17
POLR2J3-220ENST00000613744 C16orf95Q9H693 158 aa16.09■□□□□ 0.17
POLR2J3-220ENST00000613744 NDUFA7O95182 113 aa16.08■□□□□ 0.16
POLR2J3-220ENST00000613744 MRPS36P82909 103 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-220ENST00000613744 C11orf44Q8N8P7 122 aa16.08■□□□□ 0.16
POLR2J3-220ENST00000613744 DUX3Q96PT4 197 aa16.08■□□□□ 0.16
POLR2J3-220ENST00000613744 ZNF256Q9Y2P7 627 aaPredicted RBP16.08■□□□□ 0.16
POLR2J3-220ENST00000613744 A0A087WWL8 130 aa16.07■□□□□ 0.16
POLR2J3-220ENST00000613744 C9orf85Q96MD7 179 aa16.07■□□□□ 0.16
POLR2J3-220ENST00000613744 JPT2Q9H910 190 aa16.07■□□□□ 0.16
POLR2J3-220ENST00000613744 IGHV1-58A0A0C4DH39 117 aa16.07■□□□□ 0.16
POLR2J3-220ENST00000613744 I3L3M4 83 aa16.07■□□□□ 0.16
POLR2J3-220ENST00000613744 CFHR3Q02985 330 aa16.07■□□□□ 0.16
POLR2J3-220ENST00000613744 TMEM61Q8N0U2 210 aa16.07■□□□□ 0.16
POLR2J3-220ENST00000613744 C3orf22Q8N5N4 141 aa16.07■□□□□ 0.16
POLR2J3-220ENST00000613744 OPRPNQ99935 248 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-220ENST00000613744 IGHV3-64A0A075B6Q5 118 aa16.06■□□□□ 0.16
POLR2J3-220ENST00000613744 LINC00643Q86TS7 51 aa16.06■□□□□ 0.16
POLR2J3-220ENST00000613744 PRSS2P07478 247 aa16.06■□□□□ 0.16
POLR2J3-220ENST00000613744 UQCRQO14949 82 aa16.05■□□□□ 0.16
POLR2J3-220ENST00000613744 IGLV1-40P01703 118 aa16.05■□□□□ 0.16
POLR2J3-220ENST00000613744 FAM236AA0A1B0GUQ0 79 aa16.04■□□□□ 0.16
POLR2J3-220ENST00000613744 FAM236BA0A1B0GV22 79 aa16.04■□□□□ 0.16
POLR2J3-220ENST00000613744 NDUFA12Q9UI09 145 aa16.04■□□□□ 0.16
POLR2J3-220ENST00000613744 IGHV3-11P01762 117 aa16.04■□□□□ 0.16
POLR2J3-220ENST00000613744 CLEC2BQ92478 149 aa16.04■□□□□ 0.16
POLR2J3-220ENST00000613744 ZNF580Q9UK33 172 aa16.04■□□□□ 0.16
POLR2J3-220ENST00000613744 H3BUA1 57 aa16.03■□□□□ 0.16
POLR2J3-220ENST00000613744 CXCL5P42830 114 aa16.03■□□□□ 0.16
POLR2J3-220ENST00000613744 PSMB8P28062 276 aa16.02■□□□□ 0.15
POLR2J3-220ENST00000613744 PROK1P58294 105 aa16.02■□□□□ 0.15
POLR2J3-220ENST00000613744 C9orf153Q5TBE3 101 aa16.02■□□□□ 0.15
POLR2J3-220ENST00000613744 SDIM1Q6ZPB5 146 aa16.02■□□□□ 0.15
POLR2J3-220ENST00000613744 LINC00526Q96FQ7 95 aa16.02■□□□□ 0.15
POLR2J3-220ENST00000613744 F6UB75 175 aa16.01■□□□□ 0.15
POLR2J3-220ENST00000613744 ADAMTSL4-AS1Q5T5F5 129 aa16.01■□□□□ 0.15
POLR2J3-220ENST00000613744 DCANP1Q8TF63 244 aa16.01■□□□□ 0.15
POLR2J3-220ENST00000613744 DEFB104AQ8WTQ1 72 aa16.01■□□□□ 0.15
POLR2J3-220ENST00000613744 SPXQ9BT56 116 aa16.01■□□□□ 0.15
POLR2J3-220ENST00000613744 PPDPFQ9H3Y8 114 aa16.01■□□□□ 0.15
POLR2J3-220ENST00000613744 EDA2RQ9HAV5 297 aa16.01■□□□□ 0.15
POLR2J3-220ENST00000613744 IGHV3-16A0A0C4DH30 117 aa16.01■□□□□ 0.15
POLR2J3-220ENST00000613744 DEFB1P60022 68 aa16.01■□□□□ 0.15
POLR2J3-220ENST00000613744 UNQ9165/PRO28630Q6UXU0 137 aa16.01■□□□□ 0.15
POLR2J3-220ENST00000613744 A0A1B0GX51 115 aa16■□□□□ 0.15
POLR2J3-220ENST00000613744 CD28P10747 220 aa16■□□□□ 0.15
POLR2J3-220ENST00000613744 KRTAP10-3P60369 221 aa16■□□□□ 0.15
POLR2J3-220ENST00000613744 KHDC1LQ5JSQ8 128 aa15.99■□□□□ 0.15
POLR2J3-220ENST00000613744 FAM74A4Q5TZK3 123 aa15.99■□□□□ 0.15
POLR2J3-220ENST00000613744 VSIG2Q96IQ7 327 aa15.99■□□□□ 0.15
POLR2J3-220ENST00000613744 TENM1Q9UKZ4 2725 aa15.99■□□□□ 0.15
POLR2J3-220ENST00000613744 TINCRA0A1B0GVN0 87 aa15.99■□□□□ 0.15
POLR2J3-220ENST00000613744 ID1P41134 155 aa15.99■□□□□ 0.15
POLR2J3-220ENST00000613744 RPL11P62913 178 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-220ENST00000613744 USMG5Q96IX5 58 aa15.99■□□□□ 0.15
POLR2J3-220ENST00000613744 TMEM89A2RUT3 159 aa15.98■□□□□ 0.15
POLR2J3-220ENST00000613744 TRBV12-3P01733 135 aa15.97■□□□□ 0.15
POLR2J3-220ENST00000613744 C18orf65Q6ZTR6 163 aa15.97■□□□□ 0.15
POLR2J3-220ENST00000613744 TRAV8-3A0A0A6YYJ7 113 aa15.96■□□□□ 0.15
POLR2J3-220ENST00000613744 A0A1W2PRX2 142 aa15.96■□□□□ 0.15
POLR2J3-220ENST00000613744 ADARB2-AS1A8MUL3 147 aa15.96■□□□□ 0.15
POLR2J3-220ENST00000613744 CITED2Q99967 270 aaPredicted RBP15.96■□□□□ 0.15
POLR2J3-220ENST00000613744 PEMTQ9UBM1 199 aa15.95■□□□□ 0.14
POLR2J3-220ENST00000613744 COX7A2LO14548 114 aa15.95■□□□□ 0.14
POLR2J3-220ENST00000613744 LINC00694P0DN24 101 aa15.95■□□□□ 0.14
POLR2J3-220ENST00000613744 C5orf38Q86SI9 138 aa15.95■□□□□ 0.14
POLR2J3-220ENST00000613744 J3KT08 172 aa15.94■□□□□ 0.14
POLR2J3-220ENST00000613744 COPS9Q8WXC6 57 aa15.94■□□□□ 0.14
POLR2J3-220ENST00000613744 CSDC2Q9Y534 153 aaKnown RBP15.94■□□□□ 0.14
POLR2J3-220ENST00000613744 TRAV12-3A0A0B4J271 114 aa15.93■□□□□ 0.14
POLR2J3-220ENST00000613744 C5orf47Q569G3 176 aa15.93■□□□□ 0.14
POLR2J3-220ENST00000613744 DAND5Q8N907 189 aa15.93■□□□□ 0.14
POLR2J3-220ENST00000613744 FAM104AQ969W3 186 aa15.93■□□□□ 0.14
POLR2J3-220ENST00000613744 RHPN1-AS1Q9BWJ2 59 aa15.93■□□□□ 0.14
POLR2J3-220ENST00000613744 TRACP01848 142 aa15.93■□□□□ 0.14
POLR2J3-220ENST00000613744 RPS28P62857 69 aaKnown RBP15.93■□□□□ 0.14
POLR2J3-220ENST00000613744 COX7CP15954 63 aa15.91■□□□□ 0.14
POLR2J3-220ENST00000613744 HERVK_113P63121 156 aa15.91■□□□□ 0.14
POLR2J3-220ENST00000613744 RNF152Q8N8N0 203 aa15.91■□□□□ 0.14
POLR2J3-220ENST00000613744 COL6A5A8TX70 2615 aa15.91■□□□□ 0.14
POLR2J3-220ENST00000613744 NDUFA1O15239 70 aa15.91■□□□□ 0.14
POLR2J3-220ENST00000613744 CIRBPQ14011 172 aaKnown RBP15.91■□□□□ 0.14
POLR2J3-220ENST00000613744 DEFB136Q30KP8 78 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms