RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 JMJD7-PLA2G4BH0Y9G9 81 aa10.17□□□□□ -0.78
GGA3-220ENST00000613421 UBE2BP63146 152 aa10.17□□□□□ -0.78
GGA3-220ENST00000613421 LYRM9A8MSI8 78 aa10.17□□□□□ -0.78
GGA3-220ENST00000613421 TRBV6-4A0A1B0GX49 114 aa10.16□□□□□ -0.78
GGA3-220ENST00000613421 MRGPRG-AS1Q2M3A8 158 aa10.16□□□□□ -0.78
GGA3-220ENST00000613421 LINC00269Q8N2A0 174 aa10.16□□□□□ -0.78
GGA3-220ENST00000613421 ADAMTS20P59510 1910 aa10.16□□□□□ -0.78
GGA3-220ENST00000613421 IGKV3D-7A0A0C4DH55 119 aa10.16□□□□□ -0.78
GGA3-220ENST00000613421 COX8CQ7Z4L0 72 aa10.16□□□□□ -0.78
GGA3-220ENST00000613421 LINC00308Q8TCZ7 52 aa10.15□□□□□ -0.78
GGA3-220ENST00000613421 H3BQ85 93 aa10.15□□□□□ -0.78
GGA3-220ENST00000613421 FAM236AA0A1B0GUQ0 79 aa10.15□□□□□ -0.78
GGA3-220ENST00000613421 FAM236BA0A1B0GV22 79 aa10.15□□□□□ -0.78
GGA3-220ENST00000613421 REG3AQ06141 175 aa10.15□□□□□ -0.79
GGA3-220ENST00000613421 MYO18BQ8IUG5 2567 aa10.14□□□□□ -0.79
GGA3-220ENST00000613421 TRBV6-8A0A0A6YYG3 113 aa10.14□□□□□ -0.79
GGA3-220ENST00000613421 EDN2P20800 178 aa10.14□□□□□ -0.79
GGA3-220ENST00000613421 UTRNP46939 3433 aa10.14□□□□□ -0.79
GGA3-220ENST00000613421 DIRC1Q969H9 104 aa10.14□□□□□ -0.79
GGA3-220ENST00000613421 ANKRD11Q6UB99 2663 aaPredicted RBP10.14□□□□□ -0.79
GGA3-220ENST00000613421 TRIAP1O43715 76 aa10.13□□□□□ -0.79
GGA3-220ENST00000613421 FUSP35637 526 aaKnown RBP eCLIP10.13□□□□□ -0.79
GGA3-220ENST00000613421 LINC01006Q8NI28 216 aa10.13□□□□□ -0.79
GGA3-220ENST00000613421 hADV29S1A0JD25 119 aa10.13□□□□□ -0.79
GGA3-220ENST00000613421 PRM2P04554 102 aa10.13□□□□□ -0.79
GGA3-220ENST00000613421 CHCHD10Q8WYQ3 142 aaPredicted RBP10.12□□□□□ -0.79
GGA3-220ENST00000613421 TMEM256-PLSCR3K7ERE1 68 aa10.12□□□□□ -0.79
GGA3-220ENST00000613421 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
GGA3-220ENST00000613421 TRBV30A0A0K0K1B3 111 aa10.12□□□□□ -0.79
GGA3-220ENST00000613421 A8MZ25 164 aa10.12□□□□□ -0.79
GGA3-220ENST00000613421 ABCA2Q9BZC7 2435 aa10.12□□□□□ -0.79
GGA3-220ENST00000613421 TEX49A0A1B0GTD5 131 aa10.12□□□□□ -0.79
GGA3-220ENST00000613421 ATOX1O00244 68 aa10.12□□□□□ -0.79
GGA3-220ENST00000613421 IBA57-AS1B1ANH7 110 aa10.11□□□□□ -0.79
GGA3-220ENST00000613421 INAFM1C9JVW0 142 aa10.11□□□□□ -0.79
GGA3-220ENST00000613421 IGIPA6NJ69 53 aa10.11□□□□□ -0.79
GGA3-220ENST00000613421 PIK3CD-AS1Q5SR53 167 aa10.11□□□□□ -0.79
GGA3-220ENST00000613421 BRI3O95415 125 aa10.1□□□□□ -0.79
GGA3-220ENST00000613421 LINC00482Q8N8I6 264 aa10.1□□□□□ -0.79
GGA3-220ENST00000613421 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
GGA3-220ENST00000613421 TIMM17BO60830 172 aa10.1□□□□□ -0.79
GGA3-220ENST00000613421 UFSP1Q6NVU6 142 aa10.1□□□□□ -0.79
GGA3-220ENST00000613421 C14orf132Q9NPU4 83 aa10.1□□□□□ -0.79
GGA3-220ENST00000613421 TET2Q6N021 2002 aaPredicted RBP10.1□□□□□ -0.79
GGA3-220ENST00000613421 A0A1B0GX51 115 aa10.1□□□□□ -0.79
GGA3-220ENST00000613421 WFDC10AQ9H1F0 79 aa10.1□□□□□ -0.79
GGA3-220ENST00000613421 PKIGQ9Y2B9 76 aa10.09□□□□□ -0.79
GGA3-220ENST00000613421 MRPS36P82909 103 aaKnown RBP10.09□□□□□ -0.79
GGA3-220ENST00000613421 RNF183Q96D59 192 aa10.09□□□□□ -0.79
GGA3-220ENST00000613421 PRRC2AP48634 2157 aaKnown RBP10.09□□□□□ -0.79
GGA3-220ENST00000613421 A0A096LNJ9 63 aa10.08□□□□□ -0.8
GGA3-220ENST00000613421 HIGD2BQ4VC39 106 aa10.08□□□□□ -0.8
GGA3-220ENST00000613421 LINC00643Q86TS7 51 aa10.08□□□□□ -0.8
GGA3-220ENST00000613421 CEP350Q5VT06 3117 aa10.08□□□□□ -0.8
GGA3-220ENST00000613421 MT-ATP8P03928 68 aa10.08□□□□□ -0.8
GGA3-220ENST00000613421 MIFP14174 115 aa10.07□□□□□ -0.8
GGA3-220ENST00000613421 UBE2D1P51668 147 aa10.07□□□□□ -0.8
GGA3-220ENST00000613421 COX7BP24311 80 aa10.07□□□□□ -0.8
GGA3-220ENST00000613421 C11orf45Q8TAV5 145 aa10.07□□□□□ -0.8
GGA3-220ENST00000613421 NREPQ16612 68 aa10.06□□□□□ -0.8
GGA3-220ENST00000613421 BBC3Q96PG8 261 aaPredicted RBP10.06□□□□□ -0.8
GGA3-220ENST00000613421 LOC100131303A0A0U1RQF7 123 aa10.06□□□□□ -0.8
GGA3-220ENST00000613421 IGHV4-28A0A0C4DH34 117 aa10.06□□□□□ -0.8
GGA3-220ENST00000613421 HILS1P60008 231 aa10.06□□□□□ -0.8
GGA3-220ENST00000613421 ZNF580Q9UK33 172 aa10.06□□□□□ -0.8
GGA3-220ENST00000613421 ODF3L2Q3SX64 289 aa10.05□□□□□ -0.8
GGA3-220ENST00000613421 KRTAP10-9P60411 292 aa10.05□□□□□ -0.8
GGA3-220ENST00000613421 LY6G6DO95868 133 aa10.04□□□□□ -0.8
GGA3-220ENST00000613421 PDE6GP18545 87 aa10.04□□□□□ -0.8
GGA3-220ENST00000613421 UBE2D3P61077 147 aa10.04□□□□□ -0.8
GGA3-220ENST00000613421 UBE2D2P62837 147 aa10.04□□□□□ -0.8
GGA3-220ENST00000613421 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
GGA3-220ENST00000613421 IGLV2-18A0A075B6J9 118 aa10.03□□□□□ -0.8
GGA3-220ENST00000613421 USP9XQ93008 2570 aaPredicted RBP10.02□□□□□ -0.8
GGA3-220ENST00000613421 CLUHP3Q96NS8 147 aa10.02□□□□□ -0.81
GGA3-220ENST00000613421 CDC42SE2Q9NRR3 84 aa10.01□□□□□ -0.81
GGA3-220ENST00000613421 TLN2Q9Y4G6 2542 aa10.01□□□□□ -0.81
GGA3-220ENST00000613421 LINC00959A0A1B0GUT2 108 aa10.01□□□□□ -0.81
GGA3-220ENST00000613421 LST1O00453 97 aa10.01□□□□□ -0.81
GGA3-220ENST00000613421 SLPIP03973 132 aa10.01□□□□□ -0.81
GGA3-220ENST00000613421 DEFB131BA0A096LNP1 70 aa10□□□□□ -0.81
GGA3-220ENST00000613421 CD164L2Q6UWJ8 174 aa10□□□□□ -0.81
GGA3-220ENST00000613421 POM121L12Q8N7R1 296 aa10□□□□□ -0.81
GGA3-220ENST00000613421 FAM110AQ9BQ89 295 aa10□□□□□ -0.81
GGA3-220ENST00000613421 NDUFV3P56181 108 aaKnown RBP10□□□□□ -0.81
GGA3-220ENST00000613421 LINC00242Q5T6M2 205 aa9.99□□□□□ -0.81
GGA3-220ENST00000613421 KIR2DL5BQ8NHK3 375 aa9.98□□□□□ -0.81
GGA3-220ENST00000613421 CHCHD7Q9BUK0 85 aa9.98□□□□□ -0.81
GGA3-220ENST00000613421 TSPEAR-AS2P59090 65 aa9.98□□□□□ -0.81
GGA3-220ENST00000613421 UBE2AP49459 152 aa9.98□□□□□ -0.81
GGA3-220ENST00000613421 XAGE1AQ9HD64 81 aa9.98□□□□□ -0.81
GGA3-220ENST00000613421 USP9YO00507 2555 aaPredicted RBP9.97□□□□□ -0.81
GGA3-220ENST00000613421 PCSK5Q92824 1860 aa9.97□□□□□ -0.81
GGA3-220ENST00000613421 C6orf99Q4VX62 202 aa9.97□□□□□ -0.81
GGA3-220ENST00000613421 J3KT08 172 aa9.97□□□□□ -0.81
GGA3-220ENST00000613421 NDUFA7O95182 113 aa9.96□□□□□ -0.81
GGA3-220ENST00000613421 C1orf158Q8N1D5 194 aa9.96□□□□□ -0.82
GGA3-220ENST00000613421 SDIM1Q6ZPB5 146 aa9.96□□□□□ -0.82
GGA3-220ENST00000613421 LELP1Q5T871 98 aa9.95□□□□□ -0.82
GGA3-220ENST00000613421 CHD8Q9HCK8 2581 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms