RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TRAV25A0A0B4J276 109 aa10.64□□□□□ -0.71
CDH1-213ENST00000612417 BEAN1Q3B7T3 259 aa10.64□□□□□ -0.71
CDH1-213ENST00000612417 PF4P02776 101 aa10.64□□□□□ -0.71
CDH1-213ENST00000612417 SPINK8P0C7L1 97 aa10.64□□□□□ -0.71
CDH1-213ENST00000612417 INSP01308 110 aa10.63□□□□□ -0.71
CDH1-213ENST00000612417 IGHV3-53P01767 116 aa10.63□□□□□ -0.71
CDH1-213ENST00000612417 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.63□□□□□ -0.71
CDH1-213ENST00000612417 ATP6V0E2Q8NHE4 81 aa10.63□□□□□ -0.71
CDH1-213ENST00000612417 DNAJC30Q96LL9 226 aa10.63□□□□□ -0.71
CDH1-213ENST00000612417 PRO1854Q9UHT4 67 aa10.63□□□□□ -0.71
CDH1-213ENST00000612417 TRBV20-1A0A075B6N2 111 aa10.62□□□□□ -0.71
CDH1-213ENST00000612417 LOC107984156A0A0G2JMH3 177 aa10.62□□□□□ -0.71
CDH1-213ENST00000612417 WIPF1O43516 503 aa10.62□□□□□ -0.71
CDH1-213ENST00000612417 PRM2P04554 102 aa10.62□□□□□ -0.71
CDH1-213ENST00000612417 Q6ZSN1 163 aa10.62□□□□□ -0.71
CDH1-213ENST00000612417 ARL17AQ8IVW1 177 aa10.62□□□□□ -0.71
CDH1-213ENST00000612417 CHCHD7Q9BUK0 85 aa10.62□□□□□ -0.71
CDH1-213ENST00000612417 B5MCH6 92 aa10.62□□□□□ -0.71
CDH1-213ENST00000612417 LINC01587Q99440 93 aa10.62□□□□□ -0.71
CDH1-213ENST00000612417 IGHV3-30-3P0DP02 117 aa10.61□□□□□ -0.71
CDH1-213ENST00000612417 SMCPP49901 116 aaPredicted RBP10.61□□□□□ -0.71
CDH1-213ENST00000612417 UBE2D4Q9Y2X8 147 aa10.61□□□□□ -0.71
CDH1-213ENST00000612417 A0A0B4J2C4 111 aa10.61□□□□□ -0.71
CDH1-213ENST00000612417 PSMB2P49721 201 aa10.61□□□□□ -0.71
CDH1-213ENST00000612417 TIMM21Q9BVV7 248 aa10.61□□□□□ -0.71
CDH1-213ENST00000612417 Q9UF83 564 aa10.61□□□□□ -0.71
CDH1-213ENST00000612417 TINCRA0A1B0GVN0 87 aa10.6□□□□□ -0.71
CDH1-213ENST00000612417 A4D1N5 150 aa10.6□□□□□ -0.71
CDH1-213ENST00000612417 RS1O15537 224 aa10.6□□□□□ -0.71
CDH1-213ENST00000612417 C1QTNF4Q9BXJ3 329 aa10.6□□□□□ -0.71
CDH1-213ENST00000612417 ATRQ13535 2644 aa10.6□□□□□ -0.71
CDH1-213ENST00000612417 IGHV3-64A0A075B6Q5 118 aa10.59□□□□□ -0.71
CDH1-213ENST00000612417 A0A0J9YXY3 114 aa10.59□□□□□ -0.71
CDH1-213ENST00000612417 TEP1Q99973 2627 aaKnown RBP10.59□□□□□ -0.71
CDH1-213ENST00000612417 TENM1Q9UKZ4 2725 aa10.59□□□□□ -0.71
CDH1-213ENST00000612417 IGHV1-58A0A0C4DH39 117 aa10.59□□□□□ -0.71
CDH1-213ENST00000612417 TCL1BO95988 128 aa10.59□□□□□ -0.71
CDH1-213ENST00000612417 CEMP1Q6PRD7 247 aaPredicted RBP10.59□□□□□ -0.71
CDH1-213ENST00000612417 TMEM263Q8WUH6 116 aaKnown RBP10.59□□□□□ -0.71
CDH1-213ENST00000612417 EIF4EBP3O60516 100 aaPredicted RBP10.58□□□□□ -0.72
CDH1-213ENST00000612417 ODF3L2Q3SX64 289 aa10.58□□□□□ -0.72
CDH1-213ENST00000612417 SFTA2Q6UW10 78 aa10.58□□□□□ -0.72
CDH1-213ENST00000612417 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
CDH1-213ENST00000612417 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.57□□□□□ -0.72
CDH1-213ENST00000612417 IGLV1-51P01701 117 aa10.57□□□□□ -0.72
CDH1-213ENST00000612417 IGHV3-33P01772 117 aa10.57□□□□□ -0.72
CDH1-213ENST00000612417 MUSTN1Q8IVN3 82 aa10.57□□□□□ -0.72
CDH1-213ENST00000612417 IL17DQ8TAD2 202 aa10.57□□□□□ -0.72
CDH1-213ENST00000612417 LITAFQ99732 161 aa10.57□□□□□ -0.72
CDH1-213ENST00000612417 INSL3P51460 131 aa10.57□□□□□ -0.72
CDH1-213ENST00000612417 FOXI1Q12951 378 aa10.57□□□□□ -0.72
CDH1-213ENST00000612417 STHQ8IWL8 128 aa10.57□□□□□ -0.72
CDH1-213ENST00000612417 VSIG2Q96IQ7 327 aa10.57□□□□□ -0.72
CDH1-213ENST00000612417 GAGE12JA6NER3 117 aa10.56□□□□□ -0.72
CDH1-213ENST00000612417 GAGE7O76087 117 aa10.56□□□□□ -0.72
CDH1-213ENST00000612417 GAGE12FP0CL80 117 aa10.56□□□□□ -0.72
CDH1-213ENST00000612417 GAGE12GP0CL81 117 aa10.56□□□□□ -0.72
CDH1-213ENST00000612417 GAGE12IP0CL82 117 aa10.56□□□□□ -0.72
CDH1-213ENST00000612417 GAGE4Q13068 117 aa10.56□□□□□ -0.72
CDH1-213ENST00000612417 LINC00482Q8N8I6 264 aa10.56□□□□□ -0.72
CDH1-213ENST00000612417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.56□□□□□ -0.72
CDH1-213ENST00000612417 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
CDH1-213ENST00000612417 IGKV2-29A2NJV5 120 aaPredicted RBP10.56□□□□□ -0.72
CDH1-213ENST00000612417 CYSRT1A8MQ03 144 aa10.56□□□□□ -0.72
CDH1-213ENST00000612417 Q6ZUT4 128 aa10.56□□□□□ -0.72
CDH1-213ENST00000612417 RNASE13Q5GAN3 156 aaKnown RBP10.55□□□□□ -0.72
CDH1-213ENST00000612417 ZFAND6Q6FIF0 208 aa10.55□□□□□ -0.72
CDH1-213ENST00000612417 SPANXDQ9BXN6 97 aa10.55□□□□□ -0.72
CDH1-213ENST00000612417 SPANXCQ9NY87 97 aa10.55□□□□□ -0.72
CDH1-213ENST00000612417 NOTCH3Q9UM47 2321 aa10.55□□□□□ -0.72
CDH1-213ENST00000612417 CMC4P56277 68 aaPredicted RBP10.54□□□□□ -0.72
CDH1-213ENST00000612417 TEN1Q86WV5 123 aa10.54□□□□□ -0.72
CDH1-213ENST00000612417 CDIP1Q9H305 208 aa10.54□□□□□ -0.72
CDH1-213ENST00000612417 NDUFA12Q9UI09 145 aa10.54□□□□□ -0.72
CDH1-213ENST00000612417 VWFP04275 2813 aa10.54□□□□□ -0.72
CDH1-213ENST00000612417 IGLV5-45A0A087WSX0 123 aa10.54□□□□□ -0.72
CDH1-213ENST00000612417 M0QXV9 152 aa10.54□□□□□ -0.72
CDH1-213ENST00000612417 C1orf158Q8N1D5 194 aa10.54□□□□□ -0.72
CDH1-213ENST00000612417 XCL2Q9UBD3 114 aa10.54□□□□□ -0.72
CDH1-213ENST00000612417 SCGB1C2P0DMR2 95 aa10.53□□□□□ -0.72
CDH1-213ENST00000612417 TIRAPP58753 221 aa10.53□□□□□ -0.72
CDH1-213ENST00000612417 IGHV3-38A0A0C4DH36 116 aa10.53□□□□□ -0.72
CDH1-213ENST00000612417 PPDPFLQ8WWR9 84 aa10.52□□□□□ -0.73
CDH1-213ENST00000612417 TIMM17BO60830 172 aa10.51□□□□□ -0.73
CDH1-213ENST00000612417 MT-ATP8P03928 68 aa10.51□□□□□ -0.73
CDH1-213ENST00000612417 MIAQ16674 131 aa10.51□□□□□ -0.73
CDH1-213ENST00000612417 TMEM126AQ9H061 195 aa10.51□□□□□ -0.73
CDH1-213ENST00000612417 TRBV10-1A0A0K0K1A3 114 aa10.51□□□□□ -0.73
CDH1-213ENST00000612417 WFDC10AQ9H1F0 79 aa10.51□□□□□ -0.73
CDH1-213ENST00000612417 ADAMTSL4-AS1Q5T5F5 129 aa10.5□□□□□ -0.73
CDH1-213ENST00000612417 FAM19A3Q7Z5A8 133 aa10.5□□□□□ -0.73
CDH1-213ENST00000612417 TRBV30A0A0K0K1B3 111 aa10.49□□□□□ -0.73
CDH1-213ENST00000612417 CSDC2Q9Y534 153 aaKnown RBP10.49□□□□□ -0.73
CDH1-213ENST00000612417 TRGV1A0A0A0MS02 117 aa10.49□□□□□ -0.73
CDH1-213ENST00000612417 SPATA3Q8NHX4 192 aa10.49□□□□□ -0.73
CDH1-213ENST00000612417 CARD19Q96LW7 228 aa10.49□□□□□ -0.73
CDH1-213ENST00000612417 CDKN2A-AS1Q9UH64 79 aa10.49□□□□□ -0.73
CDH1-213ENST00000612417 IGHV3OR16-12A0A075B7B8 117 aa10.48□□□□□ -0.73
CDH1-213ENST00000612417 NDUFA1O15239 70 aa10.48□□□□□ -0.73
CDH1-213ENST00000612417 RPL35AP18077 110 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms