RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 SFTA2Q6UW10 78 aa12.97□□□□□ -0.33
SNAPC3-207ENST00000610884 SIGMAR1Q99720 223 aa12.97□□□□□ -0.33
SNAPC3-207ENST00000610884 TP53TG1Q9Y2A0 90 aa12.97□□□□□ -0.33
SNAPC3-207ENST00000610884 TNFRSF18Q9Y5U5 241 aa12.97□□□□□ -0.33
SNAPC3-207ENST00000610884 SLC25A29Q8N8R3 303 aa12.96□□□□□ -0.33
SNAPC3-207ENST00000610884 ZNRF2Q8NHG8 242 aa12.96□□□□□ -0.33
SNAPC3-207ENST00000610884 KIR2DL4Q99706 377 aa12.96□□□□□ -0.33
SNAPC3-207ENST00000610884 SRSF9Q13242 221 aaKnown RBP eCLIP12.96□□□□□ -0.343e-6■□□□□ 11.3
SNAPC3-207ENST00000610884 TSHBP01222 138 aa12.95□□□□□ -0.34
SNAPC3-207ENST00000610884 TRBV27A0A0K0K1C4 114 aa12.95□□□□□ -0.34
SNAPC3-207ENST00000610884 LINC01549A6NIU2 74 aa12.95□□□□□ -0.34
SNAPC3-207ENST00000610884 C11orf86A6NJI1 115 aa12.94□□□□□ -0.34
SNAPC3-207ENST00000610884 RNASE13Q5GAN3 156 aaKnown RBP12.94□□□□□ -0.34
SNAPC3-207ENST00000610884 GAGE12JA6NER3 117 aa12.94□□□□□ -0.34
SNAPC3-207ENST00000610884 GAGE4Q13068 117 aa12.94□□□□□ -0.34
SNAPC3-207ENST00000610884 GAGE5Q13069 117 aa12.94□□□□□ -0.34
SNAPC3-207ENST00000610884 DAZ2Q13117 558 aaKnown RBP12.94□□□□□ -0.34
SNAPC3-207ENST00000610884 IGLV4-69A0A075B6H9 119 aa12.93□□□□□ -0.34
SNAPC3-207ENST00000610884 TMEM238LA0A1B0GVL6 79 aa12.93□□□□□ -0.34
SNAPC3-207ENST00000610884 A6NJY4 79 aa12.93□□□□□ -0.34
SNAPC3-207ENST00000610884 PPP1R17O96001 155 aa12.93□□□□□ -0.34
SNAPC3-207ENST00000610884 FAM222AQ5U5X8 452 aa12.93□□□□□ -0.34
SNAPC3-207ENST00000610884 APOMO95445 188 aa12.92□□□□□ -0.34
SNAPC3-207ENST00000610884 LOC107984156A0A0G2JMH3 177 aa12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 TRBV6-5A0A0K0K1A5 114 aa12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 WIPF1O43516 503 aa12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 ARL17AQ8IVW1 177 aa12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 CELA1Q9UNI1 258 aa12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 IGHV4-28A0A0C4DH34 117 aa12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 IGKV2-29A2NJV5 120 aaPredicted RBP12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 I3L3M4 83 aa12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 TSPAN13O95857 204 aa12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
SNAPC3-207ENST00000610884 TRGV4A0A0C4DH28 118 aa12.9□□□□□ -0.34
SNAPC3-207ENST00000610884 UBE2D1P51668 147 aa12.9□□□□□ -0.34
SNAPC3-207ENST00000610884 A0A096LPF7 62 aa12.9□□□□□ -0.34
SNAPC3-207ENST00000610884 IGIPA6NJ69 53 aa12.89□□□□□ -0.35
SNAPC3-207ENST00000610884 PSMB2P49721 201 aa12.89□□□□□ -0.35
SNAPC3-207ENST00000610884 APOC4P55056 127 aa12.89□□□□□ -0.35
SNAPC3-207ENST00000610884 HERVK_113P61574 105 aa12.89□□□□□ -0.35
SNAPC3-207ENST00000610884 TRAV4A0A0B4J268 109 aa12.89□□□□□ -0.35
SNAPC3-207ENST00000610884 PMVKQ15126 192 aa12.89□□□□□ -0.35
SNAPC3-207ENST00000610884 OVOL2Q9BRP0 275 aa12.89□□□□□ -0.35
SNAPC3-207ENST00000610884 TSPEAR-AS2P59090 65 aa12.88□□□□□ -0.35
SNAPC3-207ENST00000610884 TMEM170BQ5T4T1 132 aa12.88□□□□□ -0.35
SNAPC3-207ENST00000610884 A0A0J9YY99 117 aa12.88□□□□□ -0.35
SNAPC3-207ENST00000610884 RHODO00212 210 aa12.88□□□□□ -0.35
SNAPC3-207ENST00000610884 SMCPP49901 116 aaPredicted RBP12.88□□□□□ -0.35
SNAPC3-207ENST00000610884 SCGB1A1P11684 91 aa12.87□□□□□ -0.35
SNAPC3-207ENST00000610884 FHL2Q14192 279 aa12.87□□□□□ -0.35
SNAPC3-207ENST00000610884 DNAH3Q8TD57 4116 aa12.87□□□□□ -0.35
SNAPC3-207ENST00000610884 PTH2Q96A98 100 aa12.87□□□□□ -0.35
SNAPC3-207ENST00000610884 COL7A1Q02388 2944 aa12.86□□□□□ -0.35
SNAPC3-207ENST00000610884 K7EQD1 137 aa12.86□□□□□ -0.35
SNAPC3-207ENST00000610884 HTN3P15516 51 aa12.86□□□□□ -0.35
SNAPC3-207ENST00000610884 PAPPA-AS1Q5QFB9 102 aa12.86□□□□□ -0.35
SNAPC3-207ENST00000610884 PIK3CD-AS1Q5SR53 167 aa12.86□□□□□ -0.35
SNAPC3-207ENST00000610884 MRAPQ8TCY5 172 aa12.86□□□□□ -0.35
SNAPC3-207ENST00000610884 RPL32P62910 135 aaKnown RBP12.85□□□□□ -0.35
SNAPC3-207ENST00000610884 FOXI1Q12951 378 aa12.85□□□□□ -0.35
SNAPC3-207ENST00000610884 EGFEM1PQ0D2K5 195 aa12.85□□□□□ -0.35
SNAPC3-207ENST00000610884 NTM-AS1Q6ZSK4 140 aa12.85□□□□□ -0.35
SNAPC3-207ENST00000610884 KIR2DL5BQ8NHK3 375 aa12.85□□□□□ -0.35
SNAPC3-207ENST00000610884 Q8NAQ8 132 aa12.84□□□□□ -0.35
SNAPC3-207ENST00000610884 C20orf203Q8NBC4 194 aa12.84□□□□□ -0.35
SNAPC3-207ENST00000610884 TMEM141Q96I45 108 aa12.84□□□□□ -0.35
SNAPC3-207ENST00000610884 TIMM17AQ99595 171 aa12.84□□□□□ -0.35
SNAPC3-207ENST00000610884 LINC00694P0DN24 101 aa12.84□□□□□ -0.35
SNAPC3-207ENST00000610884 UBE2D3P61077 147 aa12.84□□□□□ -0.35
SNAPC3-207ENST00000610884 UBE2D2P62837 147 aa12.84□□□□□ -0.35
SNAPC3-207ENST00000610884 NFE4Q86UQ8 179 aa12.84□□□□□ -0.35
SNAPC3-207ENST00000610884 CHCHD7Q9BUK0 85 aa12.84□□□□□ -0.35
SNAPC3-207ENST00000610884 RNF183Q96D59 192 aa12.83□□□□□ -0.36
SNAPC3-207ENST00000610884 IGHV3-30P01768 117 aa12.82□□□□□ -0.36
SNAPC3-207ENST00000610884 IGHV3-30-5P0DP03 117 aa12.82□□□□□ -0.36
SNAPC3-207ENST00000610884 FAM104AQ969W3 186 aa12.82□□□□□ -0.36
SNAPC3-207ENST00000610884 CFC1BP0CG36 223 aa12.82□□□□□ -0.36
SNAPC3-207ENST00000610884 CFC1P0CG37 223 aa12.82□□□□□ -0.36
SNAPC3-207ENST00000610884 DEFB121Q5J5C9 76 aa12.82□□□□□ -0.36
SNAPC3-207ENST00000610884 TCL1BO95988 128 aa12.81□□□□□ -0.36
SNAPC3-207ENST00000610884 RPL36AP83881 106 aaKnown RBP12.81□□□□□ -0.36
SNAPC3-207ENST00000610884 RPL36ALQ969Q0 106 aaKnown RBP12.81□□□□□ -0.36
SNAPC3-207ENST00000610884 J3QQQ9 107 aa12.81□□□□□ -0.36
SNAPC3-207ENST00000610884 CIDEAO60543 219 aa12.81□□□□□ -0.36
SNAPC3-207ENST00000610884 ATP6V0E2Q8NHE4 81 aa12.81□□□□□ -0.36
SNAPC3-207ENST00000610884 LGALS3P17931 250 aaKnown RBP12.8□□□□□ -0.36
SNAPC3-207ENST00000610884 LYRM7Q5U5X0 104 aa12.8□□□□□ -0.36
SNAPC3-207ENST00000610884 EDA2RQ9HAV5 297 aa12.8□□□□□ -0.36
SNAPC3-207ENST00000610884 DNHD1Q96M86 4753 aa12.8□□□□□ -0.36
SNAPC3-207ENST00000610884 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
SNAPC3-207ENST00000610884 AMELXQ99217 191 aa12.8□□□□□ -0.36
SNAPC3-207ENST00000610884 SBSPONQ8IVN8 264 aa12.79□□□□□ -0.36
SNAPC3-207ENST00000610884 SMIM9A6NGZ8 99 aa12.78□□□□□ -0.36
SNAPC3-207ENST00000610884 C10orf126Q8N4M7 172 aa12.78□□□□□ -0.36
SNAPC3-207ENST00000610884 IGLV4-3A0A075B6K6 122 aa12.78□□□□□ -0.36
SNAPC3-207ENST00000610884 A0A1B0GV72 72 aa12.78□□□□□ -0.36
SNAPC3-207ENST00000610884 GYPEP15421 78 aa12.78□□□□□ -0.36
SNAPC3-207ENST00000610884 DAD1P61803 113 aa12.78□□□□□ -0.36
SNAPC3-207ENST00000610884 RHOHQ15669 191 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms