RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 IGHV3OR16-10A0A075B7F0 116 aa8.7□□□□□ -1.02
TP53-220ENST00000610623 B4DSR2 109 aa8.7□□□□□ -1.02
TP53-220ENST00000610623 IGKV3-7A0A075B6H7 116 aa8.69□□□□□ -1.02
TP53-220ENST00000610623 hADV29S1A0JD25 119 aa8.69□□□□□ -1.02
TP53-220ENST00000610623 TRBV12-3P01733 135 aa8.69□□□□□ -1.02
TP53-220ENST00000610623 RPL18AQ02543 176 aaKnown RBP8.69□□□□□ -1.02
TP53-220ENST00000610623 ABCA2Q9BZC7 2435 aa8.69□□□□□ -1.02
TP53-220ENST00000610623 BRD3OSQ6XYD6 125 aa8.69□□□□□ -1.02
TP53-220ENST00000610623 USMG5Q96IX5 58 aa8.69□□□□□ -1.02
TP53-220ENST00000610623 IGHV1OR15-1A0A075B7D0 117 aa8.68□□□□□ -1.02
TP53-220ENST00000610623 H3BUA1 57 aa8.68□□□□□ -1.02
TP53-220ENST00000610623 IGHV4-38-2P0DP08 117 aa8.68□□□□□ -1.02
TP53-220ENST00000610623 DPH3Q96FX2 82 aa8.68□□□□□ -1.02
TP53-220ENST00000610623 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
TP53-220ENST00000610623 A6NDX4 124 aa8.68□□□□□ -1.02
TP53-220ENST00000610623 ZNF415Q09FC8 603 aa8.68□□□□□ -1.02
TP53-220ENST00000610623 IGLV5-45A0A087WSX0 123 aa8.67□□□□□ -1.02
TP53-220ENST00000610623 SERP2Q8N6R1 65 aa8.67□□□□□ -1.02
TP53-220ENST00000610623 UBE2D4Q9Y2X8 147 aa8.67□□□□□ -1.02
TP53-220ENST00000610623 RNASE13Q5GAN3 156 aaKnown RBP8.66□□□□□ -1.02
TP53-220ENST00000610623 DOPEY1Q5JWR5 2465 aa8.66□□□□□ -1.02
TP53-220ENST00000610623 IGHG2P01859 326 aa8.66□□□□□ -1.02
TP53-220ENST00000610623 ZNF843Q8N446 348 aa8.66□□□□□ -1.02
TP53-220ENST00000610623 H3BUX3 64 aa8.65□□□□□ -1.02
TP53-220ENST00000610623 J3QLI3 93 aa8.65□□□□□ -1.02
TP53-220ENST00000610623 PRB1P04280 392 aa8.65□□□□□ -1.02
TP53-220ENST00000610623 Q8N2B8 174 aa8.65□□□□□ -1.02
TP53-220ENST00000610623 LINC01356Q8N9X3 169 aa8.65□□□□□ -1.02
TP53-220ENST00000610623 CDKN2A-AS1Q9UH64 79 aa8.65□□□□□ -1.02
TP53-220ENST00000610623 IGSF10Q6WRI0 2623 aa8.65□□□□□ -1.02
TP53-220ENST00000610623 CHCHD7Q9BUK0 85 aa8.65□□□□□ -1.03
TP53-220ENST00000610623 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
TP53-220ENST00000610623 Q6JHZ5 121 aa8.64□□□□□ -1.03
TP53-220ENST00000610623 BBC3Q96PG8 261 aaPredicted RBP8.64□□□□□ -1.03
TP53-220ENST00000610623 UPK3BQ9BT76 320 aa8.64□□□□□ -1.03
TP53-220ENST00000610623 CACNA1BQ00975 2339 aa8.64□□□□□ -1.03
TP53-220ENST00000610623 IGLV5-39A0A0G2JS06 123 aa8.64□□□□□ -1.03
TP53-220ENST00000610623 K7EMT4 169 aa8.64□□□□□ -1.03
TP53-220ENST00000610623 LY6EQ16553 131 aa8.64□□□□□ -1.03
TP53-220ENST00000610623 PRIMA1Q86XR5 153 aa8.64□□□□□ -1.03
TP53-220ENST00000610623 OVOL2Q9BRP0 275 aa8.64□□□□□ -1.03
TP53-220ENST00000610623 Q9H8V8 135 aa8.64□□□□□ -1.03
TP53-220ENST00000610623 TRAV12-2A0A075B6T6 113 aa8.63□□□□□ -1.03
TP53-220ENST00000610623 DNAL4O96015 105 aa8.63□□□□□ -1.03
TP53-220ENST00000610623 HIST2H2BCQ6DN03 193 aa8.63□□□□□ -1.03
TP53-220ENST00000610623 HIST2H2BDQ6DRA6 164 aa8.63□□□□□ -1.03
TP53-220ENST00000610623 CYSTM1Q9H1C7 97 aa8.63□□□□□ -1.03
TP53-220ENST00000610623 CFAP46Q8IYW2 2715 aa8.63□□□□□ -1.03
TP53-220ENST00000610623 FAM218AQ96MZ4 157 aa8.63□□□□□ -1.03
TP53-220ENST00000610623 A0A096LNT2 108 aa8.62□□□□□ -1.03
TP53-220ENST00000610623 TRAV13-1A0A0B4J241 112 aa8.62□□□□□ -1.03
TP53-220ENST00000610623 SOSTDC1Q6X4U4 206 aa8.62□□□□□ -1.03
TP53-220ENST00000610623 IGHV3-11P01762 117 aa8.62□□□□□ -1.03
TP53-220ENST00000610623 RPL28P46779 137 aaKnown RBP8.62□□□□□ -1.03
TP53-220ENST00000610623 KIR2DL5BQ8NHK3 375 aa8.62□□□□□ -1.03
TP53-220ENST00000610623 FAM30AQ9NZY2 134 aa8.62□□□□□ -1.03
TP53-220ENST00000610623 MED13LQ71F56 2210 aa8.61□□□□□ -1.03
TP53-220ENST00000610623 SNRPD3P62318 126 aaKnown RBP8.61□□□□□ -1.03
TP53-220ENST00000610623 AKAP6Q13023 2319 aa8.61□□□□□ -1.03
TP53-220ENST00000610623 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.6□□□□□ -1.03
TP53-220ENST00000610623 IGKV2-29A2NJV5 120 aaPredicted RBP8.6□□□□□ -1.03
TP53-220ENST00000610623 ACACBO00763 2458 aa8.6□□□□□ -1.03
TP53-220ENST00000610623 NACAE9PAV3 2078 aa8.6□□□□□ -1.03
TP53-220ENST00000610623 TRAV13-2A0A0B4J235 113 aa8.6□□□□□ -1.03
TP53-220ENST00000610623 LINC00467Q9BRT7 94 aa8.6□□□□□ -1.03
TP53-220ENST00000610623 SPINK13Q1W4C9 94 aa8.59□□□□□ -1.03
TP53-220ENST00000610623 PIK3CD-AS1Q5SR53 167 aa8.59□□□□□ -1.03
TP53-220ENST00000610623 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.59□□□□□ -1.03
TP53-220ENST00000610623 OBSCN-AS1Q96MR7 158 aa8.59□□□□□ -1.03
TP53-220ENST00000610623 IGKV3-20P01619 116 aa8.59□□□□□ -1.03
TP53-220ENST00000610623 CFHR3Q02985 330 aa8.59□□□□□ -1.03
TP53-220ENST00000610623 FAM19A3Q7Z5A8 133 aa8.59□□□□□ -1.03
TP53-220ENST00000610623 Q9HAA7 133 aa8.59□□□□□ -1.03
TP53-220ENST00000610623 IGHV3-73A0A0B4J1V6 119 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 USP17L23D6RBM5 183 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 PROK1P58294 105 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 BLCAPP62952 87 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 ZNF625Q96I27 306 aaPredicted RBP8.58□□□□□ -1.04
TP53-220ENST00000610623 TMEM89A2RUT3 159 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 OXTP01178 125 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 COX6A2Q02221 97 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 DEFB112Q30KQ8 113 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 DSCR8Q96T75 97 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 USP24Q9UPU5 2620 aa8.58□□□□□ -1.04
TP53-220ENST00000610623 IGKV3D-7A0A0C4DH55 119 aa8.57□□□□□ -1.04
TP53-220ENST00000610623 NDUFC2-KCTD14E9PQ53 114 aa8.57□□□□□ -1.04
TP53-220ENST00000610623 SYNJ2BPP57105 145 aa8.57□□□□□ -1.04
TP53-220ENST00000610623 Q5XG85 94 aa8.57□□□□□ -1.04
TP53-220ENST00000610623 LINC01561Q8N1V8 128 aa8.57□□□□□ -1.04
TP53-220ENST00000610623 LINC00846Q9NV44 126 aa8.57□□□□□ -1.04
TP53-220ENST00000610623 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
TP53-220ENST00000610623 DEFB113Q30KQ7 82 aa8.57□□□□□ -1.04
TP53-220ENST00000610623 LINC00242Q5T6M2 205 aa8.57□□□□□ -1.04
TP53-220ENST00000610623 MRAPQ8TCY5 172 aa8.57□□□□□ -1.04
TP53-220ENST00000610623 USP9XQ93008 2570 aaPredicted RBP8.56□□□□□ -1.04
TP53-220ENST00000610623 F5H768 121 aa8.56□□□□□ -1.04
TP53-220ENST00000610623 H0YGX0 51 aa8.56□□□□□ -1.04
TP53-220ENST00000610623 FSHBP01225 129 aa8.56□□□□□ -1.04
TP53-220ENST00000610623 EDN2P20800 178 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms