RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 IGLV10-54A0A075B6I4 117 aa9.37□□□□□ -0.91
HDDC2-209ENST00000609477 CCL25O15444 150 aa9.37□□□□□ -0.91
HDDC2-209ENST00000609477 COX19Q49B96 90 aa9.37□□□□□ -0.91
HDDC2-209ENST00000609477 CDC42SE2Q9NRR3 84 aa9.37□□□□□ -0.91
HDDC2-209ENST00000609477 USP17L23D6RBM5 183 aa9.36□□□□□ -0.91
HDDC2-209ENST00000609477 FUSP35637 526 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDDC2-209ENST00000609477 KRTAP10-1P60331 282 aa9.36□□□□□ -0.91
HDDC2-209ENST00000609477 NDUFA5Q16718 116 aa9.36□□□□□ -0.91
HDDC2-209ENST00000609477 ZNF664Q8N3J9 261 aa9.36□□□□□ -0.91
HDDC2-209ENST00000609477 LRP1BQ9NZR2 4599 aa9.36□□□□□ -0.91
HDDC2-209ENST00000609477 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.35□□□□□ -0.91
HDDC2-209ENST00000609477 K7EMI3 77 aa9.35□□□□□ -0.91
HDDC2-209ENST00000609477 RAB5AP20339 215 aa9.35□□□□□ -0.91
HDDC2-209ENST00000609477 CFAP161Q6P656 301 aa9.35□□□□□ -0.91
HDDC2-209ENST00000609477 MAP1LC3AQ9H492 121 aa9.35□□□□□ -0.91
HDDC2-209ENST00000609477 UBE2D4Q9Y2X8 147 aa9.35□□□□□ -0.91
HDDC2-209ENST00000609477 DNAH5Q8TE73 4624 aa9.35□□□□□ -0.91
HDDC2-209ENST00000609477 SVBPQ8N300 66 aa9.34□□□□□ -0.91
HDDC2-209ENST00000609477 GNB1LQ9BYB4 327 aa9.34□□□□□ -0.91
HDDC2-209ENST00000609477 RPS10P5Q9NQ39 176 aa9.34□□□□□ -0.91
HDDC2-209ENST00000609477 HERC2O95714 4834 aa9.33□□□□□ -0.92
HDDC2-209ENST00000609477 LINC00959A0A1B0GUT2 108 aa9.33□□□□□ -0.92
HDDC2-209ENST00000609477 SNAPINO95295 136 aa9.33□□□□□ -0.92
HDDC2-209ENST00000609477 SS18Q15532 418 aa9.33□□□□□ -0.92
HDDC2-209ENST00000609477 CHCHD10Q8WYQ3 142 aaPredicted RBP9.33□□□□□ -0.92
HDDC2-209ENST00000609477 SPANXA1Q9NS26 97 aa9.33□□□□□ -0.92
HDDC2-209ENST00000609477 IGKV3OR2-268A0A0C4DH90 116 aa9.32□□□□□ -0.92
HDDC2-209ENST00000609477 GAGE12HA6NDE8 117 aa9.32□□□□□ -0.92
HDDC2-209ENST00000609477 C1orf196B1AJZ1 125 aa9.32□□□□□ -0.92
HDDC2-209ENST00000609477 MT-ND6P03923 174 aa9.32□□□□□ -0.92
HDDC2-209ENST00000609477 PRSS1P07477 247 aa9.32□□□□□ -0.92
HDDC2-209ENST00000609477 Q8N8P6 123 aa9.32□□□□□ -0.92
HDDC2-209ENST00000609477 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
HDDC2-209ENST00000609477 APOC3P02656 99 aa9.31□□□□□ -0.92
HDDC2-209ENST00000609477 G0S2P27469 103 aa9.31□□□□□ -0.92
HDDC2-209ENST00000609477 XGP55808 180 aa9.31□□□□□ -0.92
HDDC2-209ENST00000609477 MRPS36P82909 103 aaKnown RBP9.31□□□□□ -0.92
HDDC2-209ENST00000609477 CNBPP62633 177 aaKnown RBP9.3□□□□□ -0.92
HDDC2-209ENST00000609477 ORMDL2Q53FV1 153 aa9.3□□□□□ -0.92
HDDC2-209ENST00000609477 CD164L2Q6UWJ8 174 aa9.3□□□□□ -0.92
HDDC2-209ENST00000609477 Q6ZSA8 131 aa9.3□□□□□ -0.92
HDDC2-209ENST00000609477 Q8N1X5 172 aa9.3□□□□□ -0.92
HDDC2-209ENST00000609477 AP5S1Q9NUS5 200 aa9.3□□□□□ -0.92
HDDC2-209ENST00000609477 PYGO1Q9Y3Y4 419 aa9.3□□□□□ -0.92
HDDC2-209ENST00000609477 RYR1P21817 5038 aa9.29□□□□□ -0.92
HDDC2-209ENST00000609477 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.29□□□□□ -0.92
HDDC2-209ENST00000609477 LOC389332A0A1B0GUA5 103 aa9.29□□□□□ -0.92
HDDC2-209ENST00000609477 hDV102S1A0JD36 115 aa9.29□□□□□ -0.92
HDDC2-209ENST00000609477 IFI27P40305 119 aaPredicted RBP9.29□□□□□ -0.92
HDDC2-209ENST00000609477 FOXI1Q12951 378 aa9.29□□□□□ -0.92
HDDC2-209ENST00000609477 C9orf163Q8N9P6 203 aa9.29□□□□□ -0.92
HDDC2-209ENST00000609477 NPSP0C0P6 89 aa9.28□□□□□ -0.92
HDDC2-209ENST00000609477 XCL1P47992 114 aa9.28□□□□□ -0.92
HDDC2-209ENST00000609477 RPL39P62891 51 aaKnown RBP9.28□□□□□ -0.92
HDDC2-209ENST00000609477 CYSLTR1Q9Y271 337 aa9.27□□□□□ -0.93
HDDC2-209ENST00000609477 HSPG2P98160 4391 aa9.26□□□□□ -0.93
HDDC2-209ENST00000609477 APOBP04114 4563 aaKnown RBP9.26□□□□□ -0.93
HDDC2-209ENST00000609477 GVQW2A0A096LPI5 108 aaPredicted RBP9.26□□□□□ -0.93
HDDC2-209ENST00000609477 IGHV1-58A0A0C4DH39 117 aa9.26□□□□□ -0.93
HDDC2-209ENST00000609477 LINC01549A6NIU2 74 aa9.26□□□□□ -0.93
HDDC2-209ENST00000609477 Q6ZUT4 128 aa9.26□□□□□ -0.93
HDDC2-209ENST00000609477 C15orf56Q8N910 161 aa9.26□□□□□ -0.93
HDDC2-209ENST00000609477 KIAA1644Q3SXP7 199 aa9.25□□□□□ -0.93
HDDC2-209ENST00000609477 ALKBH7Q9BT30 221 aaPredicted RBP9.25□□□□□ -0.93
HDDC2-209ENST00000609477 MRPL18Q9H0U6 180 aaKnown RBP9.25□□□□□ -0.93
HDDC2-209ENST00000609477 FAM30AQ9NZY2 134 aa9.25□□□□□ -0.93
HDDC2-209ENST00000609477 TRAV13-1A0A0B4J241 112 aa9.24□□□□□ -0.93
HDDC2-209ENST00000609477 C2orf66Q6UXQ4 117 aa9.24□□□□□ -0.93
HDDC2-209ENST00000609477 PRSS3P2Q8NHM4 247 aa9.24□□□□□ -0.93
HDDC2-209ENST00000609477 FAM104AQ969W3 186 aa9.24□□□□□ -0.93
HDDC2-209ENST00000609477 TMEM141Q96I45 108 aa9.24□□□□□ -0.93
HDDC2-209ENST00000609477 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
HDDC2-209ENST00000609477 COX7A2LO14548 114 aa9.23□□□□□ -0.93
HDDC2-209ENST00000609477 FABP9Q0Z7S8 132 aa9.23□□□□□ -0.93
HDDC2-209ENST00000609477 LINC01620Q4KN68 170 aa9.23□□□□□ -0.93
HDDC2-209ENST00000609477 RNASE13Q5GAN3 156 aaKnown RBP9.23□□□□□ -0.93
HDDC2-209ENST00000609477 PAPPA-AS1Q5QFB9 102 aa9.23□□□□□ -0.93
HDDC2-209ENST00000609477 IGLV4-3A0A075B6K6 122 aa9.22□□□□□ -0.93
HDDC2-209ENST00000609477 IGHV3-64A0A075B6Q5 118 aa9.22□□□□□ -0.93
HDDC2-209ENST00000609477 APOMO95445 188 aa9.22□□□□□ -0.93
HDDC2-209ENST00000609477 MALP21145 153 aa9.22□□□□□ -0.93
HDDC2-209ENST00000609477 Q6ZN92 141 aa9.22□□□□□ -0.93
HDDC2-209ENST00000609477 SDIM1Q6ZPB5 146 aa9.22□□□□□ -0.93
HDDC2-209ENST00000609477 CHAC1Q9BUX1 264 aa9.22□□□□□ -0.93
HDDC2-209ENST00000609477 PKIGQ9Y2B9 76 aa9.22□□□□□ -0.93
HDDC2-209ENST00000609477 TGIF2-C20orf24A0A0A6YYL0 155 aa9.21□□□□□ -0.94
HDDC2-209ENST00000609477 IFITM10A6NMD0 228 aa9.21□□□□□ -0.94
HDDC2-209ENST00000609477 EPM2AB3EWF7 344 aa9.21□□□□□ -0.94
HDDC2-209ENST00000609477 ZNF561-AS1K7EIQ3 104 aa9.21□□□□□ -0.94
HDDC2-209ENST00000609477 SLPIP03973 132 aa9.21□□□□□ -0.94
HDDC2-209ENST00000609477 TEX43Q6ZNM6 134 aa9.21□□□□□ -0.94
HDDC2-209ENST00000609477 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.94
HDDC2-209ENST00000609477 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
HDDC2-209ENST00000609477 IGHV3OR16-9A0A0B4J2B5 98 aa9.2□□□□□ -0.94
HDDC2-209ENST00000609477 IGIPA6NJ69 53 aa9.2□□□□□ -0.94
HDDC2-209ENST00000609477 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
HDDC2-209ENST00000609477 TOMM6Q96B49 74 aa9.2□□□□□ -0.94
HDDC2-209ENST00000609477 TIMM17AQ99595 171 aa9.2□□□□□ -0.94
HDDC2-209ENST00000609477 C2orf88Q9BSF0 95 aa9.2□□□□□ -0.94
HDDC2-209ENST00000609477 HIGD2BQ4VC39 106 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms