RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 HIST2H2BDQ6DRA6 164 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 Q6JHZ5 121 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 C20orf173Q96LM9 149 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 C9orf85Q96MD7 179 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 AMELXQ99217 191 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 UPK3BQ9BT76 320 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 KRTAP17-1Q9BYP8 105 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 CTSZQ9UBR2 303 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 LAMTOR3Q9UHA4 124 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 PYGO1Q9Y3Y4 419 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 SERP1Q9Y6X1 66 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 TENM3Q9P273 2699 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 SACSQ9NZJ4 4579 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 IGLV4-69A0A075B6H9 119 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 IGHV4OR15-8A0A075B7B6 117 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 A0A087WW49 117 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 TMEM178BH3BS89 294 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 I3L2K1 104 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 J3QLI3 93 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 ZNF22P17026 224 aaPredicted RBP3.79□□□□□ -1.8
SSX9-202ENST00000608568 SEC61GP60059 68 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 ZNF876PQ49A33 203 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 BRD3OSQ6XYD6 125 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 ZNF826PQ6ZT77 177 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 ZNF491Q8N8L2 437 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 VSIG2Q96IQ7 327 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 DCTN5Q9BTE1 182 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 TIMM21Q9BVV7 248 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 DPH3P1Q9H4G8 78 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 MRPL36Q9P0J6 103 aaKnown RBP3.79□□□□□ -1.8
SSX9-202ENST00000608568 STAB2Q8WWQ8 2551 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 SORL1Q92673 2214 aa3.79□□□□□ -1.8
SSX9-202ENST00000608568 SMIM26A0A096LP01 95 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 TRBV7-1A0A0A6YYK4 115 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 hADV29S1A0JD25 119 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 IGIPA6NJ69 53 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 USP17L23D6RBM5 183 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 LY6LH3BQJ8 138 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 BUB3O43684 328 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 IGKV1-17P01599 117 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 PFN2P35080 140 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 DEFB112Q30KQ8 113 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 SPANXN1Q5VSR9 72 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 SFTA2Q6UW10 78 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 HRCT1Q6UXD1 115 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 MUSTN1Q8IVN3 82 aa3.78□□□□□ -1.8
SSX9-202ENST00000608568 IGHV7-4-1A0A0J9YVY3 117 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 E7EUB6 86 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 VCYO14598 125 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 SYNJ2BPP57105 145 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 RHOHQ15669 191 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 CEMP1Q6PRD7 247 aaPredicted RBP3.77□□□□□ -1.81
SSX9-202ENST00000608568 ZNF575Q86XF7 245 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 C3orf56Q8N813 242 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 KLHL30-AS1Q8NEE0 82 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 MSRB1Q9NZV6 116 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 RNF7Q9UBF6 113 aa3.77□□□□□ -1.81
SSX9-202ENST00000608568 TRBV6-5A0A0K0K1A5 114 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 H3BTX0 84 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 COX7A2LO14548 114 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 NDUFC1O43677 76 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 IGHG2P01859 326 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 GATA1P15976 413 aaPredicted RBP3.76□□□□□ -1.81
SSX9-202ENST00000608568 ZNF80P51504 273 aaPredicted RBP3.76□□□□□ -1.81
SSX9-202ENST00000608568 MIAQ16674 131 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 C4orf26Q17RF5 130 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 SERTAD4-AS1Q5TG53 156 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 C9orf139Q6ZV77 190 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 TMEM61Q8N0U2 210 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 TMEM86BQ8N661 226 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 ZNRF1Q8ND25 227 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 FAM19A4Q96LR4 140 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 LYSTQ99698 3801 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 SIRPDQ9H106 197 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 STARD9Q9P2P6 4700 aa3.76□□□□□ -1.81
SSX9-202ENST00000608568 TNCP24821 2201 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 IGKV3D-20A0A0C4DH25 116 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 FAM236DA0A1B0GTK5 79 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 NXPH4O95158 308 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 GAS8-AS1O95177 125 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 IGHV4-59P01825 116 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 FAM236CP0DP71 79 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 UBE2E1P51965 193 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 MRGPRG-AS1Q2M3A8 158 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 NSUN5P1Q3KNT7 163 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 C6orf226Q5I0X4 101 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 C9orf47Q6ZRZ4 202 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 RNF182Q8N6D2 247 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 FAM110DQ8TAY7 271 aaPredicted RBP3.75□□□□□ -1.81
SSX9-202ENST00000608568 C17orf77Q96MU5 243 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 GAFA1Q96PS6 74 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 TP53TG1Q9Y2A0 90 aa3.75□□□□□ -1.81
SSX9-202ENST00000608568 KLK5Q9Y337 293 aaPredicted RBP3.75□□□□□ -1.81
SSX9-202ENST00000608568 CSMD3Q7Z407 3707 aa3.74□□□□□ -1.81
SSX9-202ENST00000608568 IGKV2-40A0A087WW87 121 aaPredicted RBP3.74□□□□□ -1.81
SSX9-202ENST00000608568 TRBV27A0A0K0K1C4 114 aa3.74□□□□□ -1.81
SSX9-202ENST00000608568 KNCNA6PVL3 124 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms