RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 SMIM2Q9BVW6 85 aa10.91□□□□□ -0.66
SSBP4-213ENST00000602088 KRTAP4-5Q9BYR2 181 aa10.91□□□□□ -0.66
SSBP4-213ENST00000602088 FAM30AQ9NZY2 134 aa10.91□□□□□ -0.66
SSBP4-213ENST00000602088 LINC01620Q4KN68 170 aa10.9□□□□□ -0.66
SSBP4-213ENST00000602088 PRELID3AQ96N28 172 aa10.9□□□□□ -0.66
SSBP4-213ENST00000602088 CDC42SE2Q9NRR3 84 aa10.9□□□□□ -0.66
SSBP4-213ENST00000602088 GAGE12HA6NDE8 117 aa10.89□□□□□ -0.67
SSBP4-213ENST00000602088 TCAPO15273 167 aa10.89□□□□□ -0.67
SSBP4-213ENST00000602088 C10orf91Q5T1B1 145 aa10.89□□□□□ -0.67
SSBP4-213ENST00000602088 CHCHD10Q8WYQ3 142 aaPredicted RBP10.89□□□□□ -0.67
SSBP4-213ENST00000602088 CSDC2Q9Y534 153 aaKnown RBP10.89□□□□□ -0.67
SSBP4-213ENST00000602088 PCLOQ9Y6V0 5065 aa10.88□□□□□ -0.67
SSBP4-213ENST00000602088 DGAT2L7PQ6IED9 249 aa10.88□□□□□ -0.67
SSBP4-213ENST00000602088 Q6ZSA8 131 aa10.88□□□□□ -0.67
SSBP4-213ENST00000602088 ZNF664Q8N3J9 261 aa10.88□□□□□ -0.67
SSBP4-213ENST00000602088 CLRN3Q8NCR9 226 aa10.88□□□□□ -0.67
SSBP4-213ENST00000602088 UBE2D4Q9Y2X8 147 aa10.88□□□□□ -0.67
SSBP4-213ENST00000602088 LINC00959A0A1B0GUT2 108 aa10.87□□□□□ -0.67
SSBP4-213ENST00000602088 SMAGPQ0VAQ4 97 aa10.87□□□□□ -0.67
SSBP4-213ENST00000602088 CARHSP1Q9Y2V2 147 aaKnown RBP10.87□□□□□ -0.67
SSBP4-213ENST00000602088 DNAH8Q96JB1 4490 aa10.87□□□□□ -0.67
SSBP4-213ENST00000602088 PRSS47A8MTI9 375 aa10.86□□□□□ -0.67
SSBP4-213ENST00000602088 HAMPP81172 84 aa10.86□□□□□ -0.67
SSBP4-213ENST00000602088 TMEM18Q96B42 140 aa10.86□□□□□ -0.67
SSBP4-213ENST00000602088 TIMM21Q9BVV7 248 aa10.86□□□□□ -0.67
SSBP4-213ENST00000602088 LAMTOR2Q9Y2Q5 125 aa10.86□□□□□ -0.67
SSBP4-213ENST00000602088 TRAV9-1A0A075B6T8 112 aa10.85□□□□□ -0.67
SSBP4-213ENST00000602088 hDV102S1A0JD36 115 aa10.84□□□□□ -0.67
SSBP4-213ENST00000602088 RPL39P62891 51 aaKnown RBP10.84□□□□□ -0.67
SSBP4-213ENST00000602088 FOXI1Q12951 378 aa10.84□□□□□ -0.67
SSBP4-213ENST00000602088 C9orf163Q8N9P6 203 aa10.84□□□□□ -0.67
SSBP4-213ENST00000602088 FAT1Q14517 4588 aa10.84□□□□□ -0.67
SSBP4-213ENST00000602088 ABCA13Q86UQ4 5058 aa10.84□□□□□ -0.67
SSBP4-213ENST00000602088 CCL25O15444 150 aa10.83□□□□□ -0.68
SSBP4-213ENST00000602088 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
SSBP4-213ENST00000602088 S100PP25815 95 aa10.83□□□□□ -0.68
SSBP4-213ENST00000602088 XCL1P47992 114 aa10.83□□□□□ -0.68
SSBP4-213ENST00000602088 CNBPP62633 177 aaKnown RBP10.83□□□□□ -0.68
SSBP4-213ENST00000602088 SS18Q15532 418 aa10.83□□□□□ -0.68
SSBP4-213ENST00000602088 CFAP161Q6P656 301 aa10.83□□□□□ -0.68
SSBP4-213ENST00000602088 C15orf56Q8N910 161 aa10.83□□□□□ -0.68
SSBP4-213ENST00000602088 RAB5AP20339 215 aa10.82□□□□□ -0.68
SSBP4-213ENST00000602088 RHEBQ15382 184 aa10.82□□□□□ -0.68
SSBP4-213ENST00000602088 MAP1LC3AQ9H492 121 aa10.82□□□□□ -0.68
SSBP4-213ENST00000602088 SRRM2Q9UQ35 2752 aaKnown RBP10.81□□□□□ -0.68
SSBP4-213ENST00000602088 LOC389332A0A1B0GUA5 103 aa10.81□□□□□ -0.68
SSBP4-213ENST00000602088 EPM2AB3EWF7 344 aa10.81□□□□□ -0.68
SSBP4-213ENST00000602088 SLPIP03973 132 aa10.81□□□□□ -0.68
SSBP4-213ENST00000602088 RNASE13Q5GAN3 156 aaKnown RBP10.81□□□□□ -0.68
SSBP4-213ENST00000602088 Q6ZUT4 128 aa10.81□□□□□ -0.68
SSBP4-213ENST00000602088 FAM104AQ969W3 186 aa10.81□□□□□ -0.68
SSBP4-213ENST00000602088 RPS10P5Q9NQ39 176 aa10.81□□□□□ -0.68
SSBP4-213ENST00000602088 C1orf196B1AJZ1 125 aa10.8□□□□□ -0.68
SSBP4-213ENST00000602088 CD164L2Q6UWJ8 174 aa10.8□□□□□ -0.68
SSBP4-213ENST00000602088 SPANXA1Q9NS26 97 aa10.8□□□□□ -0.68
SSBP4-213ENST00000602088 AP5S1Q9NUS5 200 aa10.8□□□□□ -0.68
SSBP4-213ENST00000602088 Q8N8P6 123 aa10.79□□□□□ -0.68
SSBP4-213ENST00000602088 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
SSBP4-213ENST00000602088 GNB1LQ9BYB4 327 aa10.79□□□□□ -0.68
SSBP4-213ENST00000602088 GVQW2A0A096LPI5 108 aaPredicted RBP10.78□□□□□ -0.68
SSBP4-213ENST00000602088 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.78□□□□□ -0.68
SSBP4-213ENST00000602088 MRPS36P82909 103 aaKnown RBP10.78□□□□□ -0.68
SSBP4-213ENST00000602088 HIGD2BQ4VC39 106 aa10.78□□□□□ -0.68
SSBP4-213ENST00000602088 Q5VSD8 79 aa10.78□□□□□ -0.68
SSBP4-213ENST00000602088 SDIM1Q6ZPB5 146 aa10.78□□□□□ -0.68
SSBP4-213ENST00000602088 SCXQ7RTU7 201 aa10.78□□□□□ -0.68
SSBP4-213ENST00000602088 OPRPNQ99935 248 aaPredicted RBP10.78□□□□□ -0.68
SSBP4-213ENST00000602088 TRAV13-1A0A0B4J241 112 aa10.77□□□□□ -0.69
SSBP4-213ENST00000602088 APOC3P02656 99 aa10.77□□□□□ -0.69
SSBP4-213ENST00000602088 KIAA1644Q3SXP7 199 aa10.77□□□□□ -0.69
SSBP4-213ENST00000602088 PYGO1Q9Y3Y4 419 aa10.77□□□□□ -0.69
SSBP4-213ENST00000602088 FAM229AH3BQW9 127 aa10.76□□□□□ -0.69
SSBP4-213ENST00000602088 K7EMI3 77 aa10.76□□□□□ -0.69
SSBP4-213ENST00000602088 COX19Q49B96 90 aa10.76□□□□□ -0.69
SSBP4-213ENST00000602088 CIRBP-AS1Q8TBR5 109 aa10.76□□□□□ -0.69
SSBP4-213ENST00000602088 NXT2Q9NPJ8 142 aaKnown RBP10.76□□□□□ -0.69
SSBP4-213ENST00000602088 IGHV1-58A0A0C4DH39 117 aa10.75□□□□□ -0.69
SSBP4-213ENST00000602088 IFI27P40305 119 aaPredicted RBP10.75□□□□□ -0.69
SSBP4-213ENST00000602088 IGHV3-64A0A075B6Q5 118 aa10.74□□□□□ -0.69
SSBP4-213ENST00000602088 COX7A2LO14548 114 aa10.74□□□□□ -0.69
SSBP4-213ENST00000602088 NDUFA5Q16718 116 aa10.74□□□□□ -0.69
SSBP4-213ENST00000602088 ORMDL2Q53FV1 153 aa10.74□□□□□ -0.69
SSBP4-213ENST00000602088 IGLV4-3A0A075B6K6 122 aa10.73□□□□□ -0.69
SSBP4-213ENST00000602088 SNAPINO95295 136 aa10.73□□□□□ -0.69
SSBP4-213ENST00000602088 MT-ND6P03923 174 aa10.73□□□□□ -0.69
SSBP4-213ENST00000602088 C2orf66Q6UXQ4 117 aa10.73□□□□□ -0.69
SSBP4-213ENST00000602088 SVBPQ8N300 66 aa10.73□□□□□ -0.69
SSBP4-213ENST00000602088 CYSLTR1Q9Y271 337 aa10.73□□□□□ -0.69
SSBP4-213ENST00000602088 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.73□□□□□ -0.69
SSBP4-213ENST00000602088 IFITM10A6NMD0 228 aa10.72□□□□□ -0.69
SSBP4-213ENST00000602088 PANO1I0J062 215 aa10.72□□□□□ -0.69
SSBP4-213ENST00000602088 MALP21145 153 aa10.72□□□□□ -0.69
SSBP4-213ENST00000602088 ALKBH7Q9BT30 221 aaPredicted RBP10.72□□□□□ -0.69
SSBP4-213ENST00000602088 C5orf38Q86SI9 138 aa10.71□□□□□ -0.69
SSBP4-213ENST00000602088 LINC00526Q96FQ7 95 aa10.71□□□□□ -0.69
SSBP4-213ENST00000602088 MRPL18Q9H0U6 180 aaKnown RBP10.71□□□□□ -0.69
SSBP4-213ENST00000602088 VPS13BQ7Z7G8 4022 aa10.71□□□□□ -0.7
SSBP4-213ENST00000602088 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
SSBP4-213ENST00000602088 ZNF561-AS1K7EIQ3 104 aa10.7□□□□□ -0.7
SSBP4-213ENST00000602088 FABP9Q0Z7S8 132 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms