RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 A0A1B0GUV1 79 aa10.14□□□□□ -0.79
TRIM28-207ENST00000597136 IGIPA6NJ69 53 aa10.14□□□□□ -0.79
TRIM28-207ENST00000597136 DNAH10OSP0CZ25 163 aa10.14□□□□□ -0.79
TRIM28-207ENST00000597136 RBX1P62877 108 aa10.14□□□□□ -0.79
TRIM28-207ENST00000597136 SMAGPQ0VAQ4 97 aa10.14□□□□□ -0.79
TRIM28-207ENST00000597136 MPV17L2Q567V2 206 aa10.14□□□□□ -0.79
TRIM28-207ENST00000597136 ERASQ7Z444 233 aa10.14□□□□□ -0.79
TRIM28-207ENST00000597136 SPANXA1Q9NS26 97 aa10.14□□□□□ -0.79
TRIM28-207ENST00000597136 CSDC2Q9Y534 153 aaKnown RBP10.14□□□□□ -0.79
TRIM28-207ENST00000597136 A0A087WX48 190 aa10.13□□□□□ -0.79
TRIM28-207ENST00000597136 ZNF25P17030 456 aaPredicted RBP10.13□□□□□ -0.79
TRIM28-207ENST00000597136 IGLV4-60A0A075B6I1 120 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 IGHV3-30P01768 117 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 IGHV3-33P01772 117 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 IGHV3-30-3P0DP02 117 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 IGHV3-30-5P0DP03 117 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 FABP4P15090 132 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 C1orf134Q5TEV5 83 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 LINC00173Q6ZV60 143 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 Q8N976 141 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 OR5A1Q8NGJ0 315 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 FAM104AQ969W3 186 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 PACRGQ96M98 296 aaPredicted RBP10.12□□□□□ -0.79
TRIM28-207ENST00000597136 TIMM17AQ99595 171 aa10.12□□□□□ -0.79
TRIM28-207ENST00000597136 OPRPNQ99935 248 aaPredicted RBP10.12□□□□□ -0.79
TRIM28-207ENST00000597136 FAT2Q9NYQ8 4349 aa10.11□□□□□ -0.79
TRIM28-207ENST00000597136 LEPROTL1O95214 131 aa10.11□□□□□ -0.79
TRIM28-207ENST00000597136 LINC01556Q5JQF7 62 aa10.11□□□□□ -0.79
TRIM28-207ENST00000597136 DGAT2L7PQ6IED9 249 aa10.11□□□□□ -0.79
TRIM28-207ENST00000597136 TMEM141Q96I45 108 aa10.11□□□□□ -0.79
TRIM28-207ENST00000597136 TMEM101Q96IK0 257 aa10.11□□□□□ -0.79
TRIM28-207ENST00000597136 IGLV4-3A0A075B6K6 122 aa10.1□□□□□ -0.79
TRIM28-207ENST00000597136 IFITM10A6NMD0 228 aa10.1□□□□□ -0.79
TRIM28-207ENST00000597136 ATP5LO75964 103 aa10.1□□□□□ -0.79
TRIM28-207ENST00000597136 S100A2P29034 98 aa10.1□□□□□ -0.79
TRIM28-207ENST00000597136 MRPS36P82909 103 aaKnown RBP10.1□□□□□ -0.79
TRIM28-207ENST00000597136 TTC32Q5I0X7 151 aa10.1□□□□□ -0.79
TRIM28-207ENST00000597136 C6orf223Q8N319 242 aa10.1□□□□□ -0.79
TRIM28-207ENST00000597136 CDC42SE2Q9NRR3 84 aa10.1□□□□□ -0.79
TRIM28-207ENST00000597136 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.09□□□□□ -0.79
TRIM28-207ENST00000597136 NPSP0C0P6 89 aa10.09□□□□□ -0.79
TRIM28-207ENST00000597136 Q6ZUT4 128 aa10.09□□□□□ -0.79
TRIM28-207ENST00000597136 ZNF664Q8N3J9 261 aa10.09□□□□□ -0.79
TRIM28-207ENST00000597136 HIST1H2BLQ99880 126 aa10.09□□□□□ -0.79
TRIM28-207ENST00000597136 HSPB8Q9UJY1 196 aa10.09□□□□□ -0.79
TRIM28-207ENST00000597136 PKD1P98161 4303 aa10.09□□□□□ -0.79
TRIM28-207ENST00000597136 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
TRIM28-207ENST00000597136 EPPK1P58107 5090 aaKnown RBP10.08□□□□□ -0.8
TRIM28-207ENST00000597136 TRAV9-2A0A087WT02 112 aa10.08□□□□□ -0.8
TRIM28-207ENST00000597136 ANGP03950 147 aaKnown RBP10.08□□□□□ -0.8
TRIM28-207ENST00000597136 RNASE13Q5GAN3 156 aaKnown RBP10.08□□□□□ -0.8
TRIM28-207ENST00000597136 PAPPA-AS1Q5QFB9 102 aa10.07□□□□□ -0.8
TRIM28-207ENST00000597136 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
TRIM28-207ENST00000597136 KLK12Q9UKR0 248 aa10.07□□□□□ -0.8
TRIM28-207ENST00000597136 ZC2HC1BQ5TFG8 222 aa10.06□□□□□ -0.8
TRIM28-207ENST00000597136 Q6ZN92 141 aa10.06□□□□□ -0.8
TRIM28-207ENST00000597136 Q6ZRN7 208 aaPredicted RBP10.06□□□□□ -0.8
TRIM28-207ENST00000597136 LINC00269Q8N2A0 174 aa10.06□□□□□ -0.8
TRIM28-207ENST00000597136 AMELXQ99217 191 aa10.06□□□□□ -0.8
TRIM28-207ENST00000597136 VCX2Q9H322 139 aa10.06□□□□□ -0.8
TRIM28-207ENST00000597136 PRSS29PA6NIE9 313 aa10.05□□□□□ -0.8
TRIM28-207ENST00000597136 TNP2Q05952 138 aa10.05□□□□□ -0.8
TRIM28-207ENST00000597136 IBA57-AS1B1ANH7 110 aa10.05□□□□□ -0.8
TRIM28-207ENST00000597136 PRSS1P07477 247 aa10.05□□□□□ -0.8
TRIM28-207ENST00000597136 TEX43Q6ZNM6 134 aa10.05□□□□□ -0.8
TRIM28-207ENST00000597136 CST9LQ9H4G1 147 aa10.05□□□□□ -0.8
TRIM28-207ENST00000597136 PRR34Q9NV39 138 aa10.05□□□□□ -0.8
TRIM28-207ENST00000597136 K7EP13 123 aa10.04□□□□□ -0.8
TRIM28-207ENST00000597136 PMVKQ15126 192 aa10.04□□□□□ -0.8
TRIM28-207ENST00000597136 CLPSL2Q6UWE3 100 aa10.04□□□□□ -0.8
TRIM28-207ENST00000597136 MAP1LC3CQ9BXW4 147 aa10.04□□□□□ -0.8
TRIM28-207ENST00000597136 Q9HAA7 133 aa10.04□□□□□ -0.8
TRIM28-207ENST00000597136 HECTD4Q9Y4D8 3996 aa10.03□□□□□ -0.8
TRIM28-207ENST00000597136 C3orf79P0CE67 100 aa10.03□□□□□ -0.8
TRIM28-207ENST00000597136 REG3AQ06141 175 aa10.03□□□□□ -0.8
TRIM28-207ENST00000597136 ENHOQ6UWT2 76 aa10.03□□□□□ -0.8
TRIM28-207ENST00000597136 LINC00336Q6ZUF6 198 aa10.03□□□□□ -0.8
TRIM28-207ENST00000597136 C10orf126Q8N4M7 172 aa10.03□□□□□ -0.8
TRIM28-207ENST00000597136 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
TRIM28-207ENST00000597136 UBE2WQ96B02 151 aa10.02□□□□□ -0.81
TRIM28-207ENST00000597136 C2orf88Q9BSF0 95 aa10.02□□□□□ -0.81
TRIM28-207ENST00000597136 TRAV13-1A0A0B4J241 112 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 H0Y8G0 127 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 SYS1-DBNDD2H3BUS1 97 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 KRTDAPP60985 99 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 PKHD1P08F94 4074 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 DNAH11Q96DT5 4516 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 LINC00959A0A1B0GUT2 108 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 A0A1B0GVY2 172 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 CRPP02741 224 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 UBE2D1P51668 147 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 SPATA12Q7Z6I5 190 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 OR10D4PQ8NGN7 298 aa10.01□□□□□ -0.81
TRIM28-207ENST00000597136 ODF1Q14990 250 aa9.99□□□□□ -0.81
TRIM28-207ENST00000597136 MIAQ16674 131 aa9.99□□□□□ -0.81
TRIM28-207ENST00000597136 PET117Q6UWS5 81 aa9.99□□□□□ -0.81
TRIM28-207ENST00000597136 TRAV8-3A0A0A6YYJ7 113 aa9.98□□□□□ -0.81
TRIM28-207ENST00000597136 CCL25O15444 150 aa9.98□□□□□ -0.81
TRIM28-207ENST00000597136 SS18Q15532 418 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms