RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 POLR2KP53803 58 aaKnown RBP8.94□□□□□ -0.98
APOC1-208ENST00000592535 IMMP2LQ96T52 175 aa8.94□□□□□ -0.98
APOC1-208ENST00000592535 SMIM27A0A1W2PRY6 76 aa8.93□□□□□ -0.98
APOC1-208ENST00000592535 SMKR1H3BMG3 65 aa8.93□□□□□ -0.98
APOC1-208ENST00000592535 ESDP10768 282 aa8.93□□□□□ -0.98
APOC1-208ENST00000592535 CNBPP62633 177 aaKnown RBP8.93□□□□□ -0.98
APOC1-208ENST00000592535 YPEL4Q96NS1 127 aa8.93□□□□□ -0.98
APOC1-208ENST00000592535 NAT8BQ9UHF3 227 aa8.93□□□□□ -0.98
APOC1-208ENST00000592535 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.93□□□□□ -0.98
APOC1-208ENST00000592535 PANO1I0J062 215 aa8.92□□□□□ -0.98
APOC1-208ENST00000592535 SLPIP03973 132 aa8.92□□□□□ -0.98
APOC1-208ENST00000592535 ZNF25P17030 456 aaPredicted RBP8.92□□□□□ -0.98
APOC1-208ENST00000592535 SDIM1Q6ZPB5 146 aa8.92□□□□□ -0.98
APOC1-208ENST00000592535 C15orf56Q8N910 161 aa8.92□□□□□ -0.98
APOC1-208ENST00000592535 CHCHD10Q8WYQ3 142 aaPredicted RBP8.92□□□□□ -0.98
APOC1-208ENST00000592535 AP5S1Q9NUS5 200 aa8.92□□□□□ -0.98
APOC1-208ENST00000592535 TRBV27A0A0K0K1C4 114 aa8.91□□□□□ -0.98
APOC1-208ENST00000592535 SCO1O75880 301 aa8.91□□□□□ -0.98
APOC1-208ENST00000592535 KRTAP10-4P60372 401 aaPredicted RBP8.91□□□□□ -0.98
APOC1-208ENST00000592535 BTF3L4Q96K17 158 aa8.91□□□□□ -0.98
APOC1-208ENST00000592535 SMCO4Q9NRQ5 59 aa8.91□□□□□ -0.98
APOC1-208ENST00000592535 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
APOC1-208ENST00000592535 NRACQ8N912 160 aa8.9□□□□□ -0.98
APOC1-208ENST00000592535 OR5A1Q8NGJ0 315 aa8.9□□□□□ -0.98
APOC1-208ENST00000592535 TMEM101Q96IK0 257 aa8.9□□□□□ -0.98
APOC1-208ENST00000592535 MYCBP2O75592 4640 aa8.9□□□□□ -0.99
APOC1-208ENST00000592535 CAMPP49913 170 aa8.89□□□□□ -0.99
APOC1-208ENST00000592535 MRPL51Q4U2R6 128 aaKnown RBP8.89□□□□□ -0.99
APOC1-208ENST00000592535 HIGD2BQ4VC39 106 aa8.89□□□□□ -0.99
APOC1-208ENST00000592535 FAM104BQ5XKR9 115 aa8.89□□□□□ -0.99
APOC1-208ENST00000592535 CFAP161Q6P656 301 aa8.89□□□□□ -0.99
APOC1-208ENST00000592535 CBLN2Q8IUK8 224 aa8.89□□□□□ -0.99
APOC1-208ENST00000592535 TRBV24-1A0A075B6N3 115 aa8.88□□□□□ -0.99
APOC1-208ENST00000592535 IGHV3-64A0A075B6Q5 118 aa8.88□□□□□ -0.99
APOC1-208ENST00000592535 TRAV9-1A0A075B6T8 112 aa8.88□□□□□ -0.99
APOC1-208ENST00000592535 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.88□□□□□ -0.99
APOC1-208ENST00000592535 LINC00959A0A1B0GUT2 108 aa8.88□□□□□ -0.99
APOC1-208ENST00000592535 VCYO14598 125 aa8.88□□□□□ -0.99
APOC1-208ENST00000592535 SUMO2P61956 95 aaKnown RBP8.88□□□□□ -0.99
APOC1-208ENST00000592535 FOXI1Q12951 378 aa8.88□□□□□ -0.99
APOC1-208ENST00000592535 MRPL52Q86TS9 123 aaKnown RBP8.88□□□□□ -0.99
APOC1-208ENST00000592535 COLCA2A8K830 154 aa8.87□□□□□ -0.99
APOC1-208ENST00000592535 PPP1R17O96001 155 aa8.87□□□□□ -0.99
APOC1-208ENST00000592535 FCER1GP30273 86 aa8.87□□□□□ -0.99
APOC1-208ENST00000592535 XCL1P47992 114 aa8.87□□□□□ -0.99
APOC1-208ENST00000592535 CIRBPQ14011 172 aaKnown RBP8.87□□□□□ -0.99
APOC1-208ENST00000592535 CDC42SE2Q9NRR3 84 aa8.87□□□□□ -0.99
APOC1-208ENST00000592535 GVQW2A0A096LPI5 108 aaPredicted RBP8.86□□□□□ -0.99
APOC1-208ENST00000592535 A0A1B0GW15 77 aa8.86□□□□□ -0.99
APOC1-208ENST00000592535 CCL25O15444 150 aa8.86□□□□□ -0.99
APOC1-208ENST00000592535 CHTF8P0CG12 524 aa8.86□□□□□ -0.99
APOC1-208ENST00000592535 MRPL54Q6P161 138 aaKnown RBP8.86□□□□□ -0.99
APOC1-208ENST00000592535 HERC1Q15751 4861 aa8.86□□□□□ -0.99
APOC1-208ENST00000592535 J3QL48 77 aa8.85□□□□□ -0.99
APOC1-208ENST00000592535 S100PP25815 95 aa8.85□□□□□ -0.99
APOC1-208ENST00000592535 CKS2P33552 79 aa8.85□□□□□ -0.99
APOC1-208ENST00000592535 RPL37AP61513 92 aaKnown RBP8.85□□□□□ -0.99
APOC1-208ENST00000592535 ZNF664Q8N3J9 261 aa8.85□□□□□ -0.99
APOC1-208ENST00000592535 KIR2DL4Q99706 377 aa8.85□□□□□ -0.99
APOC1-208ENST00000592535 TGIF2-C20orf24A0A0A6YYL0 155 aa8.84□□□□□ -0.99
APOC1-208ENST00000592535 A0A1B0GXF2 115 aa8.84□□□□□ -0.99
APOC1-208ENST00000592535 HBBP68871 147 aa8.84□□□□□ -0.99
APOC1-208ENST00000592535 SS18Q15532 418 aa8.84□□□□□ -0.99
APOC1-208ENST00000592535 UBE2D4Q9Y2X8 147 aa8.84□□□□□ -0.99
APOC1-208ENST00000592535 KRTAP29-1A8MX34 341 aaPredicted RBP8.83□□□□□ -1
APOC1-208ENST00000592535 D6R8Y8 96 aa8.83□□□□□ -1
APOC1-208ENST00000592535 TNFRSF6BO95407 300 aa8.83□□□□□ -1
APOC1-208ENST00000592535 S100A8P05109 93 aa8.83□□□□□ -1
APOC1-208ENST00000592535 COX6A2Q02221 97 aa8.83□□□□□ -1
APOC1-208ENST00000592535 RNASE13Q5GAN3 156 aaKnown RBP8.83□□□□□ -1
APOC1-208ENST00000592535 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
APOC1-208ENST00000592535 DPH3Q96FX2 82 aa8.83□□□□□ -1
APOC1-208ENST00000592535 C20orf78Q9BR46 151 aa8.83□□□□□ -1
APOC1-208ENST00000592535 A0A087WYN8 130 aa8.82□□□□□ -1
APOC1-208ENST00000592535 IGHV1-58A0A0C4DH39 117 aa8.82□□□□□ -1
APOC1-208ENST00000592535 RPL32P62910 135 aaKnown RBP8.82□□□□□ -1
APOC1-208ENST00000592535 CD164L2Q6UWJ8 174 aa8.82□□□□□ -1
APOC1-208ENST00000592535 ATP5L2Q7Z4Y8 100 aa8.82□□□□□ -1
APOC1-208ENST00000592535 PRSS3P2Q8NHM4 247 aa8.82□□□□□ -1
APOC1-208ENST00000592535 LINC00526Q96FQ7 95 aa8.82□□□□□ -1
APOC1-208ENST00000592535 CSDC2Q9Y534 153 aaKnown RBP8.82□□□□□ -1
APOC1-208ENST00000592535 NPYP01303 97 aa8.81□□□□□ -1
APOC1-208ENST00000592535 HNRNPA3P51991 378 aaKnown RBP8.81□□□□□ -1
APOC1-208ENST00000592535 Q6ZUT4 128 aa8.81□□□□□ -1
APOC1-208ENST00000592535 SMIM2Q9BVW6 85 aa8.81□□□□□ -1
APOC1-208ENST00000592535 SMAGPQ0VAQ4 97 aa8.8□□□□□ -1
APOC1-208ENST00000592535 TMEM18Q96B42 140 aa8.8□□□□□ -1
APOC1-208ENST00000592535 TIMM21Q9BVV7 248 aa8.8□□□□□ -1
APOC1-208ENST00000592535 TRAV13-1A0A0B4J241 112 aa8.79□□□□□ -1
APOC1-208ENST00000592535 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
APOC1-208ENST00000592535 C1orf196B1AJZ1 125 aa8.79□□□□□ -1
APOC1-208ENST00000592535 RAB5AP20339 215 aa8.79□□□□□ -1
APOC1-208ENST00000592535 RPL39P62891 51 aaKnown RBP8.79□□□□□ -1
APOC1-208ENST00000592535 COX19Q49B96 90 aa8.79□□□□□ -1
APOC1-208ENST00000592535 TMEM136Q6ZRR5 245 aa8.79□□□□□ -1
APOC1-208ENST00000592535 GNB1LQ9BYB4 327 aa8.79□□□□□ -1
APOC1-208ENST00000592535 PLAC8Q9NZF1 115 aa8.79□□□□□ -1
APOC1-208ENST00000592535 A0A096LNI7 61 aa8.78□□□□□ -1
APOC1-208ENST00000592535 PHOX2AO14813 284 aa8.78□□□□□ -1
APOC1-208ENST00000592535 TCAPO15273 167 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms