RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 Q6ZTI0 123 aa9.95□□□□□ -0.82
SMARCA4-216ENST00000591545 C10orf99Q6UWK7 81 aa9.95□□□□□ -0.82
SMARCA4-216ENST00000591545 UPK3BQ9BT76 320 aa9.95□□□□□ -0.82
SMARCA4-216ENST00000591545 ZNF22P17026 224 aaPredicted RBP9.94□□□□□ -0.82
SMARCA4-216ENST00000591545 JMJD1CQ15652 2540 aa9.94□□□□□ -0.82
SMARCA4-216ENST00000591545 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
SMARCA4-216ENST00000591545 IBA57-AS1B1ANH7 110 aa9.94□□□□□ -0.82
SMARCA4-216ENST00000591545 BPY2O14599 106 aa9.94□□□□□ -0.82
SMARCA4-216ENST00000591545 SMR3AQ99954 134 aa9.94□□□□□ -0.82
SMARCA4-216ENST00000591545 MYO9AB2RTY4 2548 aa9.94□□□□□ -0.82
SMARCA4-216ENST00000591545 ZFYVE26Q68DK2 2539 aa9.93□□□□□ -0.82
SMARCA4-216ENST00000591545 IGLV4-3A0A075B6K6 122 aa9.93□□□□□ -0.82
SMARCA4-216ENST00000591545 CEMP1Q6PRD7 247 aaPredicted RBP9.92□□□□□ -0.82
SMARCA4-216ENST00000591545 B9D2Q9BPU9 175 aa9.92□□□□□ -0.82
SMARCA4-216ENST00000591545 TIMM17BO60830 172 aa9.92□□□□□ -0.82
SMARCA4-216ENST00000591545 CRYGDP07320 174 aa9.92□□□□□ -0.82
SMARCA4-216ENST00000591545 Q8N6K4 173 aa9.92□□□□□ -0.82
SMARCA4-216ENST00000591545 TP73-AS1Q9UF72 201 aa9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 IGKV2D-26A0A0A0MRZ7 120 aa9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 BPTFQ12830 3046 aa9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 TRBV6-5A0A0K0K1A5 114 aa9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 C1orf229Q6ZS94 237 aaPredicted RBP9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 LINC00308Q8TCZ7 52 aa9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 DOPEY1Q5JWR5 2465 aa9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 MT-ATP8P03928 68 aa9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 KIR2DL5BQ8NHK3 375 aa9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 ARHGAP21Q5T5U3 1957 aa9.91□□□□□ -0.82
SMARCA4-216ENST00000591545 LINC00467Q9BRT7 94 aa9.9□□□□□ -0.82
SMARCA4-216ENST00000591545 CDKN2A-AS1Q9UH64 79 aa9.9□□□□□ -0.82
SMARCA4-216ENST00000591545 REG3AQ06141 175 aa9.9□□□□□ -0.82
SMARCA4-216ENST00000591545 ZFAND3Q9H8U3 227 aa9.9□□□□□ -0.82
SMARCA4-216ENST00000591545 TEX49A0A1B0GTD5 131 aa9.89□□□□□ -0.83
SMARCA4-216ENST00000591545 TP53TG3Q9ULZ0 132 aa9.89□□□□□ -0.83
SMARCA4-216ENST00000591545 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
SMARCA4-216ENST00000591545 RNF185Q96GF1 192 aa9.89□□□□□ -0.83
SMARCA4-216ENST00000591545 AVPP01185 164 aa9.89□□□□□ -0.83
SMARCA4-216ENST00000591545 IMUPQ9GZP8 106 aa9.89□□□□□ -0.83
SMARCA4-216ENST00000591545 COL5A1P20908 1838 aaPredicted RBP9.89□□□□□ -0.83
SMARCA4-216ENST00000591545 FAM236DA0A1B0GTK5 79 aa9.88□□□□□ -0.83
SMARCA4-216ENST00000591545 M0QY20 66 aa9.88□□□□□ -0.83
SMARCA4-216ENST00000591545 FAM236CP0DP71 79 aa9.88□□□□□ -0.83
SMARCA4-216ENST00000591545 TRBV27A0A0K0K1C4 114 aa9.88□□□□□ -0.83
SMARCA4-216ENST00000591545 C3orf22Q8N5N4 141 aa9.88□□□□□ -0.83
SMARCA4-216ENST00000591545 CHCHD10Q8WYQ3 142 aaPredicted RBP9.88□□□□□ -0.83
SMARCA4-216ENST00000591545 TNRC6BQ9UPQ9 1833 aaKnown RBP9.88□□□□□ -0.83
SMARCA4-216ENST00000591545 H0Y9J4 135 aa9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 IGKV2-24A0A0C4DH68 120 aa9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 TRIAP1O43715 76 aa9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 ATP5EP56381 51 aaPredicted RBP9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 IGLV1-40P01703 118 aa9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 SEC61GP60059 68 aa9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 OXLD1Q5BKU9 147 aa9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 LINC00269Q8N2A0 174 aa9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 TRBV6-4A0A1B0GX49 114 aa9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 CRIP1P50238 77 aa9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 C20orf173Q96LM9 149 aa9.87□□□□□ -0.83
SMARCA4-216ENST00000591545 C20orf197Q8N268 126 aa9.86□□□□□ -0.83
SMARCA4-216ENST00000591545 EML5Q05BV3 1969 aa9.86□□□□□ -0.83
SMARCA4-216ENST00000591545 CPAMD8Q8IZJ3 1885 aa9.86□□□□□ -0.83
SMARCA4-216ENST00000591545 MAPKAPK5-AS1Q8N8E1 139 aa9.86□□□□□ -0.83
SMARCA4-216ENST00000591545 BBC3Q96PG8 261 aaPredicted RBP9.86□□□□□ -0.83
SMARCA4-216ENST00000591545 ATG2AQ2TAZ0 1938 aa9.85□□□□□ -0.83
SMARCA4-216ENST00000591545 COL4A2P08572 1712 aa9.85□□□□□ -0.83
SMARCA4-216ENST00000591545 CFAP126Q5VTH2 177 aa9.85□□□□□ -0.83
SMARCA4-216ENST00000591545 ZNF462Q96JM2 2506 aa9.85□□□□□ -0.83
SMARCA4-216ENST00000591545 CEP295Q9C0D2 2601 aa9.85□□□□□ -0.83
SMARCA4-216ENST00000591545 SDIM1Q6ZPB5 146 aa9.85□□□□□ -0.83
SMARCA4-216ENST00000591545 NDUFC1O43677 76 aa9.84□□□□□ -0.83
SMARCA4-216ENST00000591545 IGLV2-11P01706 119 aa9.84□□□□□ -0.83
SMARCA4-216ENST00000591545 BRK1Q8WUW1 75 aa9.84□□□□□ -0.83
SMARCA4-216ENST00000591545 PRB2P02812 416 aaPredicted RBP9.84□□□□□ -0.83
SMARCA4-216ENST00000591545 C18orf65Q6ZTR6 163 aa9.84□□□□□ -0.83
SMARCA4-216ENST00000591545 TRBV6-8A0A0A6YYG3 113 aa9.84□□□□□ -0.83
SMARCA4-216ENST00000591545 Q6ZS46 218 aa9.84□□□□□ -0.83
SMARCA4-216ENST00000591545 ANKRD11Q6UB99 2663 aaPredicted RBP9.83□□□□□ -0.84
SMARCA4-216ENST00000591545 LY6G6CO95867 125 aa9.83□□□□□ -0.84
SMARCA4-216ENST00000591545 CHD7Q9P2D1 2997 aa9.82□□□□□ -0.84
SMARCA4-216ENST00000591545 BRCA2P51587 3418 aa9.82□□□□□ -0.84
SMARCA4-216ENST00000591545 NRACQ8N912 160 aa9.82□□□□□ -0.84
SMARCA4-216ENST00000591545 NDUFC2-KCTD14E9PQ53 114 aa9.82□□□□□ -0.84
SMARCA4-216ENST00000591545 C2orf91Q6ZV80 131 aa9.82□□□□□ -0.84
SMARCA4-216ENST00000591545 ABCA12Q86UK0 2595 aa9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 EXPH5Q8NEV8 1989 aa9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 V9GYY9 64 aa9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 C5orf42Q9H799 3197 aa9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 A0A1W2PPR1 153 aa9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 IGHV4-30-4P0DP06 118 aa9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 MRPS36P82909 103 aaKnown RBP9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 MUC7Q8TAX7 377 aa9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 LRRK2Q5S007 2527 aa9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 LST1O00453 97 aa9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 KPRPQ5T749 579 aaPredicted RBP9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 ENHOQ6UWT2 76 aa9.81□□□□□ -0.84
SMARCA4-216ENST00000591545 IGKV4-1P06312 121 aa9.8□□□□□ -0.84
SMARCA4-216ENST00000591545 FAM240AA0A1B0GVK7 77 aa9.8□□□□□ -0.84
SMARCA4-216ENST00000591545 SERP2Q8N6R1 65 aa9.8□□□□□ -0.84
SMARCA4-216ENST00000591545 PIK3CD-AS1Q5SR53 167 aa9.8□□□□□ -0.84
SMARCA4-216ENST00000591545 WFDC10AQ9H1F0 79 aa9.8□□□□□ -0.84
SMARCA4-216ENST00000591545 FASNP49327 2511 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms