RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 C20orf78Q9BR46 151 aa6.01□□□□□ -1.45
DNMT1-223ENST00000591239 IGKV3OR2-268A0A0C4DH90 116 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 C7orf77A4D0Y5 90 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 D6R8Y8 96 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 TNFRSF6BO95407 300 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 PPBPP02775 128 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 PRSS1P07477 247 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 ADCYAP1P18509 176 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 LINC01620Q4KN68 170 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 TMEM101Q96IK0 257 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 BTF3L4Q96K17 158 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 FAM30AQ9NZY2 134 aa6□□□□□ -1.45
DNMT1-223ENST00000591239 PCLOQ9Y6V0 5065 aa5.99□□□□□ -1.45
DNMT1-223ENST00000591239 RPL32P62910 135 aaKnown RBP5.99□□□□□ -1.45
DNMT1-223ENST00000591239 HAMPP81172 84 aa5.99□□□□□ -1.45
DNMT1-223ENST00000591239 MRPL52Q86TS9 123 aaKnown RBP5.99□□□□□ -1.45
DNMT1-223ENST00000591239 COMMD7Q86VX2 200 aa5.99□□□□□ -1.45
DNMT1-223ENST00000591239 OR5A1Q8NGJ0 315 aa5.99□□□□□ -1.45
DNMT1-223ENST00000591239 SRRM2Q9UQ35 2752 aaKnown RBP5.98□□□□□ -1.45
DNMT1-223ENST00000591239 GAGE12HA6NDE8 117 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 PHOX2AO14813 284 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 NPYP01303 97 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 DGAT2L7PQ6IED9 249 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 TMEM136Q6ZRR5 245 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 Q6ZSA8 131 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 ORMDL3Q8N138 153 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 CLRN3Q8NCR9 226 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 CHCHD10Q8WYQ3 142 aaPredicted RBP5.98□□□□□ -1.45
DNMT1-223ENST00000591239 SMIM2Q9BVW6 85 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 SEC11CQ9BY50 192 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 CDC42SE2Q9NRR3 84 aa5.98□□□□□ -1.45
DNMT1-223ENST00000591239 hDV102S1A0JD36 115 aa5.97□□□□□ -1.45
DNMT1-223ENST00000591239 TCAPO15273 167 aa5.97□□□□□ -1.45
DNMT1-223ENST00000591239 SMR3BP02814 79 aaPredicted RBP5.97□□□□□ -1.45
DNMT1-223ENST00000591239 SMAGPQ0VAQ4 97 aa5.97□□□□□ -1.45
DNMT1-223ENST00000591239 ZNF664Q8N3J9 261 aa5.97□□□□□ -1.45
DNMT1-223ENST00000591239 PRELID3AQ96N28 172 aa5.97□□□□□ -1.45
DNMT1-223ENST00000591239 IMMP2LQ96T52 175 aa5.97□□□□□ -1.45
DNMT1-223ENST00000591239 CTDSP1Q9GZU7 261 aa5.97□□□□□ -1.45
DNMT1-223ENST00000591239 CSDC2Q9Y534 153 aaKnown RBP5.97□□□□□ -1.45
DNMT1-223ENST00000591239 LINC00959A0A1B0GUT2 108 aa5.96□□□□□ -1.46
DNMT1-223ENST00000591239 EPM2AB3EWF7 344 aa5.96□□□□□ -1.46
DNMT1-223ENST00000591239 TMEM18Q96B42 140 aa5.96□□□□□ -1.46
DNMT1-223ENST00000591239 UBE2D4Q9Y2X8 147 aa5.96□□□□□ -1.46
DNMT1-223ENST00000591239 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.46
DNMT1-223ENST00000591239 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 CCL25O15444 150 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 XCL1P47992 114 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 CNBPP62633 177 aaKnown RBP5.95□□□□□ -1.46
DNMT1-223ENST00000591239 RPL39P62891 51 aaKnown RBP5.95□□□□□ -1.46
DNMT1-223ENST00000591239 FOXI1Q12951 378 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 SS18Q15532 418 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 C10orf91Q5T1B1 145 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 CFAP161Q6P656 301 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 C15orf56Q8N910 161 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 C9orf163Q8N9P6 203 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 TIMM21Q9BVV7 248 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 LAMTOR2Q9Y2Q5 125 aa5.95□□□□□ -1.46
DNMT1-223ENST00000591239 ABCA13Q86UQ4 5058 aa5.94□□□□□ -1.46
DNMT1-223ENST00000591239 PRSS47A8MTI9 375 aa5.94□□□□□ -1.46
DNMT1-223ENST00000591239 SLPIP03973 132 aa5.94□□□□□ -1.46
DNMT1-223ENST00000591239 RAB5AP20339 215 aa5.94□□□□□ -1.46
DNMT1-223ENST00000591239 RNASE13Q5GAN3 156 aaKnown RBP5.94□□□□□ -1.46
DNMT1-223ENST00000591239 Q5VSD8 79 aa5.94□□□□□ -1.46
DNMT1-223ENST00000591239 CHAC1Q9BUX1 264 aa5.94□□□□□ -1.46
DNMT1-223ENST00000591239 AP5S1Q9NUS5 200 aa5.94□□□□□ -1.46
DNMT1-223ENST00000591239 FAT1Q14517 4588 aa5.94□□□□□ -1.46
DNMT1-223ENST00000591239 TRAV9-1A0A075B6T8 112 aa5.93□□□□□ -1.46
DNMT1-223ENST00000591239 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.93□□□□□ -1.46
DNMT1-223ENST00000591239 LOC389332A0A1B0GUA5 103 aa5.93□□□□□ -1.46
DNMT1-223ENST00000591239 C1orf196B1AJZ1 125 aa5.93□□□□□ -1.46
DNMT1-223ENST00000591239 S100PP25815 95 aa5.93□□□□□ -1.46
DNMT1-223ENST00000591239 CD164L2Q6UWJ8 174 aa5.93□□□□□ -1.46
DNMT1-223ENST00000591239 SDIM1Q6ZPB5 146 aa5.93□□□□□ -1.46
DNMT1-223ENST00000591239 Q6ZUT4 128 aa5.93□□□□□ -1.46
DNMT1-223ENST00000591239 SCXQ7RTU7 201 aa5.93□□□□□ -1.46
DNMT1-223ENST00000591239 MAP1LC3AQ9H492 121 aa5.93□□□□□ -1.46
DNMT1-223ENST00000591239 SPANXA1Q9NS26 97 aa5.93□□□□□ -1.46
DNMT1-223ENST00000591239 CARHSP1Q9Y2V2 147 aaKnown RBP5.93□□□□□ -1.46
DNMT1-223ENST00000591239 TRAV13-1A0A0B4J241 112 aa5.92□□□□□ -1.46
DNMT1-223ENST00000591239 H3BS24 57 aa5.92□□□□□ -1.46
DNMT1-223ENST00000591239 RHEBQ15382 184 aa5.92□□□□□ -1.46
DNMT1-223ENST00000591239 HIGD2BQ4VC39 106 aa5.92□□□□□ -1.46
DNMT1-223ENST00000591239 FAM104AQ969W3 186 aa5.92□□□□□ -1.46
DNMT1-223ENST00000591239 IGHV3-64A0A075B6Q5 118 aa5.91□□□□□ -1.46
DNMT1-223ENST00000591239 GVQW2A0A096LPI5 108 aaPredicted RBP5.91□□□□□ -1.46
DNMT1-223ENST00000591239 IGHV1-58A0A0C4DH39 117 aa5.91□□□□□ -1.46
DNMT1-223ENST00000591239 MRPS36P82909 103 aaKnown RBP5.91□□□□□ -1.46
DNMT1-223ENST00000591239 KIAA1644Q3SXP7 199 aa5.91□□□□□ -1.46
DNMT1-223ENST00000591239 Q8N8P6 123 aa5.91□□□□□ -1.46
DNMT1-223ENST00000591239 CIRBP-AS1Q8TBR5 109 aa5.91□□□□□ -1.46
DNMT1-223ENST00000591239 OPRPNQ99935 248 aaPredicted RBP5.91□□□□□ -1.46
DNMT1-223ENST00000591239 RPS10P5Q9NQ39 176 aa5.91□□□□□ -1.46
DNMT1-223ENST00000591239 GNB1LQ9BYB4 327 aa5.9□□□□□ -1.46
DNMT1-223ENST00000591239 NXT2Q9NPJ8 142 aaKnown RBP5.9□□□□□ -1.46
DNMT1-223ENST00000591239 PYGO1Q9Y3Y4 419 aa5.9□□□□□ -1.46
DNMT1-223ENST00000591239 PANO1I0J062 215 aa5.89□□□□□ -1.47
DNMT1-223ENST00000591239 K7EMI3 77 aa5.89□□□□□ -1.47
DNMT1-223ENST00000591239 COX7A2LO14548 114 aa5.89□□□□□ -1.47
DNMT1-223ENST00000591239 MALP21145 153 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms