RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 FGF6P10767 208 aa11.27□□□□□ -0.61
GCDH-213ENST00000590627 ZNF25P17030 456 aaPredicted RBP11.27□□□□□ -0.61
GCDH-213ENST00000590627 GAGE6Q13070 117 aa11.27□□□□□ -0.61
GCDH-213ENST00000590627 PMCHL1Q16048 86 aa11.27□□□□□ -0.61
GCDH-213ENST00000590627 SPANXA1Q9NS26 97 aa11.27□□□□□ -0.61
GCDH-213ENST00000590627 UBE2D4Q9Y2X8 147 aa11.27□□□□□ -0.61
GCDH-213ENST00000590627 PYGO1Q9Y3Y4 419 aa11.27□□□□□ -0.61
GCDH-213ENST00000590627 ABCA13Q86UQ4 5058 aa11.27□□□□□ -0.61
GCDH-213ENST00000590627 TMEM262E9PQX1 116 aa11.26□□□□□ -0.61
GCDH-213ENST00000590627 NPSP0C0P6 89 aa11.26□□□□□ -0.61
GCDH-213ENST00000590627 DNAH10OSP0CZ25 163 aa11.26□□□□□ -0.61
GCDH-213ENST00000590627 PDZD11Q5EBL8 140 aa11.26□□□□□ -0.61
GCDH-213ENST00000590627 LINC01556Q5JQF7 62 aa11.26□□□□□ -0.61
GCDH-213ENST00000590627 IGIPA6NJ69 53 aa11.25□□□□□ -0.61
GCDH-213ENST00000590627 SIVA1O15304 175 aa11.25□□□□□ -0.61
GCDH-213ENST00000590627 RBX1P62877 108 aa11.25□□□□□ -0.61
GCDH-213ENST00000590627 AMMECR1LQ6DCA0 310 aa11.25□□□□□ -0.61
GCDH-213ENST00000590627 ERASQ7Z444 233 aa11.25□□□□□ -0.61
GCDH-213ENST00000590627 FAM19A2Q8N3H0 131 aa11.25□□□□□ -0.61
GCDH-213ENST00000590627 A0A087WX48 190 aa11.24□□□□□ -0.61
GCDH-213ENST00000590627 C5orf52A6NGY3 159 aa11.24□□□□□ -0.61
GCDH-213ENST00000590627 MPV17L2Q567V2 206 aa11.24□□□□□ -0.61
GCDH-213ENST00000590627 C1orf134Q5TEV5 83 aa11.24□□□□□ -0.61
GCDH-213ENST00000590627 PACRGQ96M98 296 aaPredicted RBP11.24□□□□□ -0.61
GCDH-213ENST00000590627 TIMM17AQ99595 171 aa11.24□□□□□ -0.61
GCDH-213ENST00000590627 Q9H8V8 135 aa11.24□□□□□ -0.61
GCDH-213ENST00000590627 MRPS36P82909 103 aaKnown RBP11.23□□□□□ -0.61
GCDH-213ENST00000590627 OR5A1Q8NGJ0 315 aa11.23□□□□□ -0.61
GCDH-213ENST00000590627 FAM104AQ969W3 186 aa11.23□□□□□ -0.61
GCDH-213ENST00000590627 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
GCDH-213ENST00000590627 TMEM101Q96IK0 257 aa11.23□□□□□ -0.61
GCDH-213ENST00000590627 SCGB3A1Q96QR1 104 aa11.23□□□□□ -0.61
GCDH-213ENST00000590627 K7EP13 123 aa11.22□□□□□ -0.61
GCDH-213ENST00000590627 SNRPEP62304 92 aaKnown RBP11.22□□□□□ -0.61
GCDH-213ENST00000590627 HIST3H2BBQ8N257 126 aa11.22□□□□□ -0.61
GCDH-213ENST00000590627 Q8N976 141 aa11.22□□□□□ -0.61
GCDH-213ENST00000590627 CDC42SE2Q9NRR3 84 aa11.22□□□□□ -0.61
GCDH-213ENST00000590627 TMA7Q9Y2S6 64 aaKnown RBP11.22□□□□□ -0.61
GCDH-213ENST00000590627 HSPG2P98160 4391 aa11.21□□□□□ -0.61
GCDH-213ENST00000590627 IGLV4-60A0A075B6I1 120 aa11.21□□□□□ -0.61
GCDH-213ENST00000590627 ATP5LO75964 103 aa11.21□□□□□ -0.61
GCDH-213ENST00000590627 DGAT2L7PQ6IED9 249 aa11.21□□□□□ -0.61
GCDH-213ENST00000590627 Q8N3U1 123 aa11.21□□□□□ -0.61
GCDH-213ENST00000590627 IGLV4-3A0A075B6K6 122 aa11.2□□□□□ -0.62
GCDH-213ENST00000590627 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
GCDH-213ENST00000590627 LEPROTL1O95214 131 aa11.2□□□□□ -0.62
GCDH-213ENST00000590627 IGHV3-30P01768 117 aa11.2□□□□□ -0.62
GCDH-213ENST00000590627 IGHV3-33P01772 117 aa11.2□□□□□ -0.62
GCDH-213ENST00000590627 IGHV3-30-3P0DP02 117 aa11.2□□□□□ -0.62
GCDH-213ENST00000590627 IGHV3-30-5P0DP03 117 aa11.2□□□□□ -0.62
GCDH-213ENST00000590627 ZNF664Q8N3J9 261 aa11.2□□□□□ -0.62
GCDH-213ENST00000590627 HSPB8Q9UJY1 196 aa11.2□□□□□ -0.62
GCDH-213ENST00000590627 PAPPA-AS1Q5QFB9 102 aa11.19□□□□□ -0.62
GCDH-213ENST00000590627 Q6ZUT4 128 aa11.19□□□□□ -0.62
GCDH-213ENST00000590627 TRAV9-2A0A087WT02 112 aa11.18□□□□□ -0.62
GCDH-213ENST00000590627 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
GCDH-213ENST00000590627 C10orf126Q8N4M7 172 aa11.18□□□□□ -0.62
GCDH-213ENST00000590627 IFI27L1Q96BM0 104 aa11.18□□□□□ -0.62
GCDH-213ENST00000590627 AMELXQ99217 191 aa11.18□□□□□ -0.62
GCDH-213ENST00000590627 OPRPNQ99935 248 aaPredicted RBP11.18□□□□□ -0.62
GCDH-213ENST00000590627 LRP1BQ9NZR2 4599 aa11.18□□□□□ -0.62
GCDH-213ENST00000590627 IFITM10A6NMD0 228 aa11.17□□□□□ -0.62
GCDH-213ENST00000590627 ANGP03950 147 aaKnown RBP11.17□□□□□ -0.62
GCDH-213ENST00000590627 FABP4P15090 132 aa11.17□□□□□ -0.62
GCDH-213ENST00000590627 S100A2P29034 98 aa11.17□□□□□ -0.62
GCDH-213ENST00000590627 Q6ZN92 141 aa11.17□□□□□ -0.62
GCDH-213ENST00000590627 HIST1H2BLQ99880 126 aa11.17□□□□□ -0.62
GCDH-213ENST00000590627 PRR34Q9NV39 138 aa11.17□□□□□ -0.62
GCDH-213ENST00000590627 LINC00269Q8N2A0 174 aa11.16□□□□□ -0.62
GCDH-213ENST00000590627 VCX2Q9H322 139 aa11.16□□□□□ -0.62
GCDH-213ENST00000590627 KLK12Q9UKR0 248 aa11.16□□□□□ -0.62
GCDH-213ENST00000590627 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.62
GCDH-213ENST00000590627 IBA57-AS1B1ANH7 110 aa11.15□□□□□ -0.62
GCDH-213ENST00000590627 TEX43Q6ZNM6 134 aa11.15□□□□□ -0.62
GCDH-213ENST00000590627 BAALCQ8WXS3 180 aa11.15□□□□□ -0.62
GCDH-213ENST00000590627 TNP2Q05952 138 aa11.14□□□□□ -0.63
GCDH-213ENST00000590627 REG3AQ06141 175 aa11.14□□□□□ -0.63
GCDH-213ENST00000590627 PMVKQ15126 192 aa11.14□□□□□ -0.63
GCDH-213ENST00000590627 TTC32Q5I0X7 151 aa11.14□□□□□ -0.63
GCDH-213ENST00000590627 C6orf223Q8N319 242 aa11.14□□□□□ -0.63
GCDH-213ENST00000590627 CST9LQ9H4G1 147 aa11.14□□□□□ -0.63
GCDH-213ENST00000590627 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
GCDH-213ENST00000590627 RNASE13Q5GAN3 156 aaKnown RBP11.13□□□□□ -0.63
GCDH-213ENST00000590627 ENHOQ6UWT2 76 aa11.13□□□□□ -0.63
GCDH-213ENST00000590627 C2orf88Q9BSF0 95 aa11.13□□□□□ -0.63
GCDH-213ENST00000590627 KRTAP4-5Q9BYR2 181 aa11.13□□□□□ -0.63
GCDH-213ENST00000590627 TRAV12-1A0A0B4J245 112 aa11.12□□□□□ -0.63
GCDH-213ENST00000590627 C16orf90A8MZG2 172 aa11.12□□□□□ -0.63
GCDH-213ENST00000590627 CCL25O15444 150 aa11.12□□□□□ -0.63
GCDH-213ENST00000590627 PRSS1P07477 247 aa11.12□□□□□ -0.63
GCDH-213ENST00000590627 SPATA12Q7Z6I5 190 aa11.12□□□□□ -0.63
GCDH-213ENST00000590627 MAP1LC3CQ9BXW4 147 aa11.12□□□□□ -0.63
GCDH-213ENST00000590627 KRTAP1-5Q9BYS1 174 aa11.12□□□□□ -0.63
GCDH-213ENST00000590627 LINC00959A0A1B0GUT2 108 aa11.11□□□□□ -0.63
GCDH-213ENST00000590627 CRPP02741 224 aa11.11□□□□□ -0.63
GCDH-213ENST00000590627 MIAQ16674 131 aa11.11□□□□□ -0.63
GCDH-213ENST00000590627 ZC2HC1BQ5TFG8 222 aa11.11□□□□□ -0.63
GCDH-213ENST00000590627 UBE2WQ96B02 151 aa11.11□□□□□ -0.63
GCDH-213ENST00000590627 TRAV8-3A0A0A6YYJ7 113 aa11.1□□□□□ -0.63
GCDH-213ENST00000590627 TRAV8-4A0A0B4J246 113 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms