RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 RPL39P62891 51 aaKnown RBP14.29□□□□□ -0.12
R3HDM4-206ENST00000590454 NFE4Q86UQ8 179 aa14.29□□□□□ -0.12
R3HDM4-206ENST00000590454 PRR34Q9NV39 138 aa14.29□□□□□ -0.12
R3HDM4-206ENST00000590454 TRAV8-3A0A0A6YYJ7 113 aa14.28□□□□□ -0.12
R3HDM4-206ENST00000590454 COLCA2A8K830 154 aa14.28□□□□□ -0.12
R3HDM4-206ENST00000590454 RAB5AP20339 215 aa14.27□□□□□ -0.13
R3HDM4-206ENST00000590454 MRPL52Q86TS9 123 aaKnown RBP14.27□□□□□ -0.13
R3HDM4-206ENST00000590454 ATP6V1G1O75348 118 aa14.26□□□□□ -0.13
R3HDM4-206ENST00000590454 REG3AQ06141 175 aa14.26□□□□□ -0.13
R3HDM4-206ENST00000590454 UBE2D4Q9Y2X8 147 aa14.26□□□□□ -0.13
R3HDM4-206ENST00000590454 CRPP02741 224 aa14.25□□□□□ -0.13
R3HDM4-206ENST00000590454 NXT2Q9NPJ8 142 aaKnown RBP14.25□□□□□ -0.13
R3HDM4-206ENST00000590454 IGKV2D-24A0A075B6R9 120 aa14.24□□□□□ -0.13
R3HDM4-206ENST00000590454 ZNF25P17030 456 aaPredicted RBP14.24□□□□□ -0.13
R3HDM4-206ENST00000590454 Q0VG73 95 aa14.24□□□□□ -0.13
R3HDM4-206ENST00000590454 OR5A1Q8NGJ0 315 aa14.24□□□□□ -0.13
R3HDM4-206ENST00000590454 FAM104AQ969W3 186 aa14.24□□□□□ -0.13
R3HDM4-206ENST00000590454 IGLV10-54A0A075B6I4 117 aa14.23□□□□□ -0.13
R3HDM4-206ENST00000590454 IGKV3OR2-268A0A0C4DH90 116 aa14.23□□□□□ -0.13
R3HDM4-206ENST00000590454 PRSS3P2Q8NHM4 247 aa14.23□□□□□ -0.13
R3HDM4-206ENST00000590454 C18orf32Q8TCD1 76 aa14.23□□□□□ -0.13
R3HDM4-206ENST00000590454 TMEM101Q96IK0 257 aa14.23□□□□□ -0.13
R3HDM4-206ENST00000590454 CDC42SE2Q9NRR3 84 aa14.23□□□□□ -0.13
R3HDM4-206ENST00000590454 TRGC2P03986 189 aa14.22□□□□□ -0.13
R3HDM4-206ENST00000590454 RNASE13Q5GAN3 156 aaKnown RBP14.22□□□□□ -0.13
R3HDM4-206ENST00000590454 OPRPNQ99935 248 aaPredicted RBP14.22□□□□□ -0.13
R3HDM4-206ENST00000590454 DMBT1Q9UGM3 2413 aaPredicted RBP14.22□□□□□ -0.13
R3HDM4-206ENST00000590454 PSCAO43653 123 aa14.21□□□□□ -0.13
R3HDM4-206ENST00000590454 MIAQ16674 131 aa14.21□□□□□ -0.13
R3HDM4-206ENST00000590454 KRTAP26-1Q6PEX3 210 aa14.21□□□□□ -0.13
R3HDM4-206ENST00000590454 Q6ZUT4 128 aa14.21□□□□□ -0.13
R3HDM4-206ENST00000590454 ZNF664Q8N3J9 261 aa14.21□□□□□ -0.13
R3HDM4-206ENST00000590454 URB1-AS1Q96HZ7 61 aa14.21□□□□□ -0.13
R3HDM4-206ENST00000590454 TM2D2Q9BX73 214 aa14.21□□□□□ -0.13
R3HDM4-206ENST00000590454 LRCOL1A6NCL2 159 aa14.2□□□□□ -0.14
R3HDM4-206ENST00000590454 LINC01546A6NGU7 62 aa14.2□□□□□ -0.14
R3HDM4-206ENST00000590454 WFDC2Q14508 124 aa14.2□□□□□ -0.14
R3HDM4-206ENST00000590454 TMEM18Q96B42 140 aa14.2□□□□□ -0.14
R3HDM4-206ENST00000590454 TIMM21Q9BVV7 248 aa14.2□□□□□ -0.14
R3HDM4-206ENST00000590454 C1orf43Q9BWL3 253 aa14.2□□□□□ -0.14
R3HDM4-206ENST00000590454 CSDC2Q9Y534 153 aaKnown RBP14.2□□□□□ -0.14
R3HDM4-206ENST00000590454 A0A087WTM6 91 aa14.19□□□□□ -0.14
R3HDM4-206ENST00000590454 ORMDL2Q53FV1 153 aa14.19□□□□□ -0.14
R3HDM4-206ENST00000590454 DGAT2L7PQ6IED9 249 aa14.19□□□□□ -0.14
R3HDM4-206ENST00000590454 RMI2Q96E14 147 aa14.19□□□□□ -0.14
R3HDM4-206ENST00000590454 PGPEP1Q9NXJ5 209 aa14.19□□□□□ -0.14
R3HDM4-206ENST00000590454 LECT2O14960 151 aa14.18□□□□□ -0.14
R3HDM4-206ENST00000590454 C2orf66Q6UXQ4 117 aa14.18□□□□□ -0.14
R3HDM4-206ENST00000590454 BAALCQ8WXS3 180 aa14.18□□□□□ -0.14
R3HDM4-206ENST00000590454 K7EMI3 77 aa14.17□□□□□ -0.14
R3HDM4-206ENST00000590454 S100A1P23297 94 aa14.17□□□□□ -0.14
R3HDM4-206ENST00000590454 Q5VSD8 79 aa14.17□□□□□ -0.14
R3HDM4-206ENST00000590454 FA2HQ7L5A8 372 aa14.17□□□□□ -0.14
R3HDM4-206ENST00000590454 SPANXA1Q9NS26 97 aa14.17□□□□□ -0.14
R3HDM4-206ENST00000590454 FUSP35637 526 aaKnown RBP eCLIP14.16□□□□□ -0.14
R3HDM4-206ENST00000590454 XGP55808 180 aa14.16□□□□□ -0.14
R3HDM4-206ENST00000590454 CYSLTR1Q9Y271 337 aa14.16□□□□□ -0.14
R3HDM4-206ENST00000590454 COX11Q9Y6N1 276 aa14.15□□□□□ -0.14
R3HDM4-206ENST00000590454 TRAV8-4A0A0B4J246 113 aa14.14□□□□□ -0.15
R3HDM4-206ENST00000590454 LINC00959A0A1B0GUT2 108 aa14.14□□□□□ -0.15
R3HDM4-206ENST00000590454 SMAGPQ0VAQ4 97 aa14.14□□□□□ -0.15
R3HDM4-206ENST00000590454 IGLV4-3A0A075B6K6 122 aa14.13□□□□□ -0.15
R3HDM4-206ENST00000590454 EREGO14944 169 aa14.13□□□□□ -0.15
R3HDM4-206ENST00000590454 MRPS36P82909 103 aaKnown RBP14.13□□□□□ -0.15
R3HDM4-206ENST00000590454 CHCHD10Q8WYQ3 142 aaPredicted RBP14.13□□□□□ -0.15
R3HDM4-206ENST00000590454 TOMM6Q96B49 74 aa14.13□□□□□ -0.15
R3HDM4-206ENST00000590454 PYGO1Q9Y3Y4 419 aa14.13□□□□□ -0.15
R3HDM4-206ENST00000590454 GAGE12HA6NDE8 117 aa14.12□□□□□ -0.15
R3HDM4-206ENST00000590454 IGIPA6NJ69 53 aa14.12□□□□□ -0.15
R3HDM4-206ENST00000590454 LINC00614P0C842 121 aa14.12□□□□□ -0.15
R3HDM4-206ENST00000590454 ZC2HC1BQ5TFG8 222 aa14.12□□□□□ -0.15
R3HDM4-206ENST00000590454 CDPF1Q6NVV7 123 aa14.12□□□□□ -0.15
R3HDM4-206ENST00000590454 A0A096LNJ9 63 aa14.11□□□□□ -0.15
R3HDM4-206ENST00000590454 PMCHL1Q16048 86 aa14.11□□□□□ -0.15
R3HDM4-206ENST00000590454 AP5S1Q9NUS5 200 aa14.11□□□□□ -0.15
R3HDM4-206ENST00000590454 TRAV13-1A0A0B4J241 112 aa14.1□□□□□ -0.15
R3HDM4-206ENST00000590454 CCL25O15444 150 aa14.1□□□□□ -0.15
R3HDM4-206ENST00000590454 XCL1P47992 114 aa14.1□□□□□ -0.15
R3HDM4-206ENST00000590454 Q8N814 137 aa14.09□□□□□ -0.15
R3HDM4-206ENST00000590454 FOXI1Q12951 378 aa14.08□□□□□ -0.16
R3HDM4-206ENST00000590454 LINC00173Q6ZV60 143 aa14.08□□□□□ -0.16
R3HDM4-206ENST00000590454 TMEM141Q96I45 108 aa14.08□□□□□ -0.16
R3HDM4-206ENST00000590454 USP17L23D6RBM5 183 aa14.07□□□□□ -0.16
R3HDM4-206ENST00000590454 SS18Q15532 418 aa14.07□□□□□ -0.16
R3HDM4-206ENST00000590454 SCGB3A1Q96QR1 104 aa14.07□□□□□ -0.16
R3HDM4-206ENST00000590454 FAT1Q14517 4588 aa14.07□□□□□ -0.16
R3HDM4-206ENST00000590454 IFITM10A6NMD0 228 aa14.06□□□□□ -0.16
R3HDM4-206ENST00000590454 G0S2P27469 103 aa14.06□□□□□ -0.16
R3HDM4-206ENST00000590454 LINC00310P59036 64 aa14.06□□□□□ -0.16
R3HDM4-206ENST00000590454 RAB5BP61020 215 aa14.06□□□□□ -0.16
R3HDM4-206ENST00000590454 BAGE3Q86Y29 109 aa14.05□□□□□ -0.16
R3HDM4-206ENST00000590454 TIMM17AQ99595 171 aa14.05□□□□□ -0.16
R3HDM4-206ENST00000590454 C1orf196B1AJZ1 125 aa14.04□□□□□ -0.16
R3HDM4-206ENST00000590454 ERASQ7Z444 233 aa14.04□□□□□ -0.16
R3HDM4-206ENST00000590454 AMELXQ99217 191 aa14.04□□□□□ -0.16
R3HDM4-206ENST00000590454 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.03□□□□□ -0.16
R3HDM4-206ENST00000590454 FAM229AH3BQW9 127 aa14.03□□□□□ -0.16
R3HDM4-206ENST00000590454 SMR3BP02814 79 aaPredicted RBP14.03□□□□□ -0.16
R3HDM4-206ENST00000590454 KRTAP10-1P60331 282 aa14.03□□□□□ -0.16
R3HDM4-206ENST00000590454 TEX43Q6ZNM6 134 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms