RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 LYNX1P0DP58 116 aa2.85□□□□□ -1.95
VMP1-208ENST00000588617 KCNRGQ8N5I3 272 aa2.85□□□□□ -1.95
VMP1-208ENST00000588617 DEFB123Q8N688 67 aa2.85□□□□□ -1.95
VMP1-208ENST00000588617 EML5Q05BV3 1969 aa2.85□□□□□ -1.95
VMP1-208ENST00000588617 USP34Q70CQ2 3546 aa2.85□□□□□ -1.95
VMP1-208ENST00000588617 VPS13AQ96RL7 3174 aa2.84□□□□□ -1.95
VMP1-208ENST00000588617 PDE4DIPQ5VU43 2346 aa2.84□□□□□ -1.95
VMP1-208ENST00000588617 SMIM31A0A1B0GVY4 71 aa2.84□□□□□ -1.95
VMP1-208ENST00000588617 IGHV3-30P01768 117 aa2.84□□□□□ -1.95
VMP1-208ENST00000588617 IGHV3-30-5P0DP03 117 aa2.84□□□□□ -1.95
VMP1-208ENST00000588617 SMIM11AP58511 58 aa2.84□□□□□ -1.95
VMP1-208ENST00000588617 MRPL36Q9P0J6 103 aaKnown RBP2.84□□□□□ -1.95
VMP1-208ENST00000588617 TRAV2A0A0B4J234 112 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 H0YGG7 62 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 HMGN4O00479 90 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 GNGT2O14610 69 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 DLEU1O43261 78 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 PITX3O75364 302 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 PRB1P04280 392 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 VSTM2AQ8TAG5 236 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 PPDPFLQ8WWR9 84 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 ODF3Q96PU9 254 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 NINQ8N4C6 2090 aa2.83□□□□□ -1.96
VMP1-208ENST00000588617 CACNA1BQ00975 2339 aa2.82□□□□□ -1.96
VMP1-208ENST00000588617 TRIOBPQ9H2D6 2365 aa2.82□□□□□ -1.96
VMP1-208ENST00000588617 WDFY3Q8IZQ1 3526 aa2.82□□□□□ -1.96
VMP1-208ENST00000588617 A0A087WXM4 84 aa2.82□□□□□ -1.96
VMP1-208ENST00000588617 LOC100130705A0A1B0GUX0 176 aa2.82□□□□□ -1.96
VMP1-208ENST00000588617 HMGN2P05204 90 aaKnown RBP2.82□□□□□ -1.96
VMP1-208ENST00000588617 RPL37AP61513 92 aaKnown RBP2.82□□□□□ -1.96
VMP1-208ENST00000588617 C6orf52Q5T4I8 152 aa2.82□□□□□ -1.96
VMP1-208ENST00000588617 Q6ZSA8 131 aa2.82□□□□□ -1.96
VMP1-208ENST00000588617 C8orf59Q8N0T1 100 aaPredicted RBP2.82□□□□□ -1.96
VMP1-208ENST00000588617 CFAP54Q96N23 3096 aa2.82□□□□□ -1.96
VMP1-208ENST00000588617 WDFY4Q6ZS81 3184 aa2.82□□□□□ -1.96
VMP1-208ENST00000588617 BDP1A6H8Y1 2624 aa2.81□□□□□ -1.96
VMP1-208ENST00000588617 DEFB133Q30KQ1 61 aa2.81□□□□□ -1.96
VMP1-208ENST00000588617 DMAC1Q96GE9 116 aa2.81□□□□□ -1.96
VMP1-208ENST00000588617 ATG5Q9H1Y0 275 aa2.81□□□□□ -1.96
VMP1-208ENST00000588617 SPEGQ15772 3267 aa2.81□□□□□ -1.96
VMP1-208ENST00000588617 WDR87Q6ZQQ6 2873 aa2.8□□□□□ -1.96
VMP1-208ENST00000588617 LINC01545Q5VT33 79 aa2.8□□□□□ -1.96
VMP1-208ENST00000588617 SBSPONQ8IVN8 264 aa2.8□□□□□ -1.96
VMP1-208ENST00000588617 PDCD10Q9BUL8 212 aa2.8□□□□□ -1.96
VMP1-208ENST00000588617 SCN3BQ9NY72 215 aa2.8□□□□□ -1.96
VMP1-208ENST00000588617 C22orf24Q9Y442 160 aa2.8□□□□□ -1.96
VMP1-208ENST00000588617 LINC00587B1AMM8 73 aa2.79□□□□□ -1.96
VMP1-208ENST00000588617 PIPP12273 146 aaPredicted RBP2.79□□□□□ -1.96
VMP1-208ENST00000588617 SNRPGP62308 76 aaKnown RBP2.79□□□□□ -1.96
VMP1-208ENST00000588617 DCDP81605 110 aaKnown RBP2.79□□□□□ -1.96
VMP1-208ENST00000588617 DEFB110Q30KQ9 67 aa2.79□□□□□ -1.96
VMP1-208ENST00000588617 C12orf73Q69YU5 71 aa2.79□□□□□ -1.96
VMP1-208ENST00000588617 DPH3Q96FX2 82 aa2.79□□□□□ -1.96
VMP1-208ENST00000588617 U3KQA8 63 aa2.79□□□□□ -1.96
VMP1-208ENST00000588617 TRAV12-2A0A075B6T6 113 aa2.78□□□□□ -1.96
VMP1-208ENST00000588617 STATHP02808 62 aa2.78□□□□□ -1.96
VMP1-208ENST00000588617 TFF1P04155 84 aa2.78□□□□□ -1.96
VMP1-208ENST00000588617 FXYD4P59646 89 aa2.78□□□□□ -1.96
VMP1-208ENST00000588617 SPCS2Q15005 226 aa2.78□□□□□ -1.96
VMP1-208ENST00000588617 XAF1Q6GPH4 301 aa2.78□□□□□ -1.96
VMP1-208ENST00000588617 BTG2P78543 158 aa2.77□□□□□ -1.97
VMP1-208ENST00000588617 WFDC6Q9BQY6 131 aa2.77□□□□□ -1.97
VMP1-208ENST00000588617 C2orf88Q9BSF0 95 aa2.77□□□□□ -1.97
VMP1-208ENST00000588617 CMC2Q9NRP2 79 aa2.77□□□□□ -1.97
VMP1-208ENST00000588617 TRBV10-1A0A0K0K1A3 114 aa2.76□□□□□ -1.97
VMP1-208ENST00000588617 A0A1B0GWA3 101 aa2.76□□□□□ -1.97
VMP1-208ENST00000588617 CPSF4LA6NMK7 179 aaKnown RBP2.76□□□□□ -1.97
VMP1-208ENST00000588617 NCR3O14931 201 aa2.76□□□□□ -1.97
VMP1-208ENST00000588617 IFNGP01579 166 aa2.76□□□□□ -1.97
VMP1-208ENST00000588617 ANGP03950 147 aaKnown RBP2.76□□□□□ -1.97
VMP1-208ENST00000588617 SLC25A6P12236 298 aa2.76□□□□□ -1.97
VMP1-208ENST00000588617 TSLPQ969D9 159 aa2.76□□□□□ -1.97
VMP1-208ENST00000588617 FBN1P35555 2871 aaKnown RBP2.76□□□□□ -1.97
VMP1-208ENST00000588617 TECTAO75443 2155 aa2.76□□□□□ -1.97
VMP1-208ENST00000588617 FREM2Q5SZK8 3169 aa2.75□□□□□ -1.97
VMP1-208ENST00000588617 CACNA1EQ15878 2313 aa2.75□□□□□ -1.97
VMP1-208ENST00000588617 FXYD6P3P58550 94 aa2.75□□□□□ -1.97
VMP1-208ENST00000588617 MEIG1Q5JSS6 88 aa2.75□□□□□ -1.97
VMP1-208ENST00000588617 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.75□□□□□ -1.97
VMP1-208ENST00000588617 AMELYQ99218 206 aa2.75□□□□□ -1.97
VMP1-208ENST00000588617 TTC28Q96AY4 2481 aa2.75□□□□□ -1.97
VMP1-208ENST00000588617 ASPMQ8IZT6 3477 aa2.74□□□□□ -1.97
VMP1-208ENST00000588617 CFAP47Q6ZTR5 3102 aa2.74□□□□□ -1.97
VMP1-208ENST00000588617 CCDC179H3BU77 68 aa2.74□□□□□ -1.97
VMP1-208ENST00000588617 IL5P05113 134 aa2.74□□□□□ -1.97
VMP1-208ENST00000588617 SPANXN1Q5VSR9 72 aa2.74□□□□□ -1.97
VMP1-208ENST00000588617 ACBD7Q8N6N7 88 aa2.74□□□□□ -1.97
VMP1-208ENST00000588617 S100ZQ8WXG8 99 aa2.74□□□□□ -1.97
VMP1-208ENST00000588617 MRPL35Q9NZE8 188 aaKnown RBP2.74□□□□□ -1.97
VMP1-208ENST00000588617 NDUFA12Q9UI09 145 aa2.74□□□□□ -1.97
VMP1-208ENST00000588617 SPAG17Q6Q759 2223 aa2.74□□□□□ -1.97
VMP1-208ENST00000588617 ZDBF2Q9HCK1 2354 aa2.74□□□□□ -1.97
VMP1-208ENST00000588617 DMXL1Q9Y485 3027 aa2.73□□□□□ -1.97
VMP1-208ENST00000588617 HIST1H1DP16402 221 aaKnown RBP2.73□□□□□ -1.97
VMP1-208ENST00000588617 OR2T2Q6IF00 324 aa2.73□□□□□ -1.97
VMP1-208ENST00000588617 ZGRF1Q86YA3 2104 aa2.73□□□□□ -1.97
VMP1-208ENST00000588617 COPS9Q8WXC6 57 aa2.73□□□□□ -1.97
VMP1-208ENST00000588617 TMEM242Q9NWH2 141 aa2.73□□□□□ -1.97
VMP1-208ENST00000588617 HIGD1CA8MV81 97 aa2.72□□□□□ -1.97
VMP1-208ENST00000588617 KRTAP21-3Q3LHN1 58 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms