RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 S100A8P05109 93 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 TRGC1P0CF51 173 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 RPS10P46783 165 aaKnown RBP4.04□□□□□ -1.76
SDF2-205ENST00000587629 FOXA3P55318 350 aaPredicted RBP4.04□□□□□ -1.76
SDF2-205ENST00000587629 AMMECR1LQ6DCA0 310 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 RNASEKQ6P5S7 137 aaKnown RBP4.04□□□□□ -1.76
SDF2-205ENST00000587629 CFAP161Q6P656 301 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 STPG4Q8N801 248 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 GATD1Q8NB37 220 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 CHCHD10Q8WYQ3 142 aaPredicted RBP4.04□□□□□ -1.76
SDF2-205ENST00000587629 C11orf52Q96A22 123 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 RPL39LQ96EH5 51 aaKnown RBP4.04□□□□□ -1.76
SDF2-205ENST00000587629 RNF185Q96GF1 192 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 PGLYRP4Q96LB8 373 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 PLAC8Q9NZF1 115 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 TRBV20OR9-2A0A075B6H5 130 aa4.03□□□□□ -1.76
SDF2-205ENST00000587629 F8W036 122 aa4.03□□□□□ -1.76
SDF2-205ENST00000587629 NDUFS6O75380 124 aaKnown RBP4.03□□□□□ -1.76
SDF2-205ENST00000587629 SCO1O75880 301 aa4.03□□□□□ -1.76
SDF2-205ENST00000587629 RAB5BP61020 215 aa4.03□□□□□ -1.76
SDF2-205ENST00000587629 MEF2BQ02080 365 aaPredicted RBP4.03□□□□□ -1.76
SDF2-205ENST00000587629 PEA15Q15121 130 aa4.03□□□□□ -1.76
SDF2-205ENST00000587629 NUDT10Q8NFP7 164 aa4.03□□□□□ -1.76
SDF2-205ENST00000587629 LINC00526Q96FQ7 95 aa4.03□□□□□ -1.76
SDF2-205ENST00000587629 NUDT11Q96G61 164 aa4.03□□□□□ -1.76
SDF2-205ENST00000587629 RNASE7Q9H1E1 156 aaKnown RBP4.03□□□□□ -1.76
SDF2-205ENST00000587629 SMCO4Q9NRQ5 59 aa4.03□□□□□ -1.76
SDF2-205ENST00000587629 A0A096LNI7 61 aa4.02□□□□□ -1.77
SDF2-205ENST00000587629 TRAV1-1A0A0B4J248 108 aa4.02□□□□□ -1.77
SDF2-205ENST00000587629 PDE6DO43924 150 aa4.02□□□□□ -1.77
SDF2-205ENST00000587629 FGF6P10767 208 aa4.02□□□□□ -1.77
SDF2-205ENST00000587629 XCL1P47992 114 aa4.02□□□□□ -1.77
SDF2-205ENST00000587629 PRR3P79522 188 aaKnown RBP4.02□□□□□ -1.77
SDF2-205ENST00000587629 LINC00518Q8N0U6 118 aa4.02□□□□□ -1.77
SDF2-205ENST00000587629 GVQW2A0A096LPI5 108 aaPredicted RBP4.01□□□□□ -1.77
SDF2-205ENST00000587629 C1orf196B1AJZ1 125 aa4.01□□□□□ -1.77
SDF2-205ENST00000587629 K7EN84 100 aa4.01□□□□□ -1.77
SDF2-205ENST00000587629 APCSP02743 223 aa4.01□□□□□ -1.77
SDF2-205ENST00000587629 MT-ND4LP03901 98 aa4.01□□□□□ -1.77
SDF2-205ENST00000587629 PMCHP20382 165 aa4.01□□□□□ -1.77
SDF2-205ENST00000587629 CTRLP40313 264 aa4.01□□□□□ -1.77
SDF2-205ENST00000587629 FOXI1Q12951 378 aa4.01□□□□□ -1.77
SDF2-205ENST00000587629 OCC1Q8TAD7 63 aa4.01□□□□□ -1.77
SDF2-205ENST00000587629 SMIM12Q96EX1 92 aa4.01□□□□□ -1.77
SDF2-205ENST00000587629 LINC01600Q96MT4 127 aa4.01□□□□□ -1.77
SDF2-205ENST00000587629 RPP21Q9H633 154 aaKnown RBP4.01□□□□□ -1.77
SDF2-205ENST00000587629 SDHAF1A6NFY7 115 aa4□□□□□ -1.77
SDF2-205ENST00000587629 CCL25O15444 150 aa4□□□□□ -1.77
SDF2-205ENST00000587629 GAS8-AS1O95177 125 aa4□□□□□ -1.77
SDF2-205ENST00000587629 S100A6P06703 90 aa4□□□□□ -1.77
SDF2-205ENST00000587629 BCL2P10415 239 aa4□□□□□ -1.77
SDF2-205ENST00000587629 RHEBQ15382 184 aa4□□□□□ -1.77
SDF2-205ENST00000587629 SMIM15Q7Z3B0 74 aa4□□□□□ -1.77
SDF2-205ENST00000587629 TMEM101Q96IK0 257 aa4□□□□□ -1.77
SDF2-205ENST00000587629 TNXBP22105 4242 aa4□□□□□ -1.77
SDF2-205ENST00000587629 A0A0J9YXV3 536 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 LINC00959A0A1B0GUT2 108 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 FAM231BA6NCW3 169 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 H7C423 109 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 I3L3M4 83 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 NCR2O95944 276 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 TSHBP01222 138 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 SMIM6P0DI80 62 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 TAGLN2P37802 199 aaKnown RBP3.99□□□□□ -1.77
SDF2-205ENST00000587629 CEBPGP53567 150 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 OR5A1Q8NGJ0 315 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 BTF3L4Q96K17 158 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 CARD19Q96LW7 228 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 CNFNQ9BYD5 112 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 TMEM242Q9NWH2 141 aa3.99□□□□□ -1.77
SDF2-205ENST00000587629 IGHV1-58A0A0C4DH39 117 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 ZNF561-AS1K7EIQ3 104 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 GATCO43716 136 aaKnown RBP3.98□□□□□ -1.77
SDF2-205ENST00000587629 KRTAP10-8P60410 259 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 CTAG1AP78358 180 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 SYCNQ0VAF6 134 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 GAGE2BQ13066 116 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 SS18Q15532 418 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 REG3GQ6UW15 175 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 SPINK6Q6UWN8 80 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 ST20Q9HBF5 79 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 LINC00474Q9P2X8 69 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 LRP2P98164 4655 aa3.98□□□□□ -1.77
SDF2-205ENST00000587629 RNF213Q63HN8 5207 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 IGLV4-69A0A075B6H9 119 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 C5orf52A6NGY3 159 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 COLCA2A8K830 154 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 ZNF25P17030 456 aaPredicted RBP3.97□□□□□ -1.77
SDF2-205ENST00000587629 ADCYAP1P18509 176 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 MALP21145 153 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 S100PP25815 95 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 PNRC1Q12796 327 aaPredicted RBP3.97□□□□□ -1.77
SDF2-205ENST00000587629 SRSF9Q13242 221 aaKnown RBP eCLIP3.97□□□□□ -1.77
SDF2-205ENST00000587629 FAM74A3Q4VXF1 159 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 RNASE13Q5GAN3 156 aaKnown RBP3.97□□□□□ -1.77
SDF2-205ENST00000587629 Q6ZRP5 223 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 ZNF664Q8N3J9 261 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 MRAP2Q96G30 205 aa3.97□□□□□ -1.77
SDF2-205ENST00000587629 EIF5A2Q9GZV4 153 aaKnown RBP3.97□□□□□ -1.77
SDF2-205ENST00000587629 CDC42SE2Q9NRR3 84 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms