RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 PHOX2AO14813 284 aa11.43□□□□□ -0.58
ITGB4-205ENST00000579211 NPYP01303 97 aa11.43□□□□□ -0.58
ITGB4-205ENST00000579211 PRSS1P07477 247 aa11.43□□□□□ -0.58
ITGB4-205ENST00000579211 ADCYAP1P18509 176 aa11.43□□□□□ -0.58
ITGB4-205ENST00000579211 SS18Q15532 418 aa11.43□□□□□ -0.58
ITGB4-205ENST00000579211 CFAP161Q6P656 301 aa11.43□□□□□ -0.58
ITGB4-205ENST00000579211 ZNF664Q8N3J9 261 aa11.43□□□□□ -0.58
ITGB4-205ENST00000579211 CHCHD10Q8WYQ3 142 aaPredicted RBP11.43□□□□□ -0.58
ITGB4-205ENST00000579211 APOBP04114 4563 aaKnown RBP11.42□□□□□ -0.58
ITGB4-205ENST00000579211 RPL32P62910 135 aaKnown RBP11.42□□□□□ -0.58
ITGB4-205ENST00000579211 HAMPP81172 84 aa11.42□□□□□ -0.58
ITGB4-205ENST00000579211 MRPL52Q86TS9 123 aaKnown RBP11.42□□□□□ -0.58
ITGB4-205ENST00000579211 IMMP2LQ96T52 175 aa11.42□□□□□ -0.58
ITGB4-205ENST00000579211 SMIM2Q9BVW6 85 aa11.42□□□□□ -0.58
ITGB4-205ENST00000579211 HSPG2P98160 4391 aa11.42□□□□□ -0.58
ITGB4-205ENST00000579211 EPM2AB3EWF7 344 aa11.41□□□□□ -0.58
ITGB4-205ENST00000579211 SMR3BP02814 79 aaPredicted RBP11.41□□□□□ -0.58
ITGB4-205ENST00000579211 RAB5AP20339 215 aa11.41□□□□□ -0.58
ITGB4-205ENST00000579211 S100PP25815 95 aa11.41□□□□□ -0.58
ITGB4-205ENST00000579211 CDC42SE2Q9NRR3 84 aa11.41□□□□□ -0.58
ITGB4-205ENST00000579211 XCL1P47992 114 aa11.4□□□□□ -0.58
ITGB4-205ENST00000579211 FAM30AQ9NZY2 134 aa11.4□□□□□ -0.58
ITGB4-205ENST00000579211 LOC389332A0A1B0GUA5 103 aa11.39□□□□□ -0.59
ITGB4-205ENST00000579211 LINC00959A0A1B0GUT2 108 aa11.39□□□□□ -0.59
ITGB4-205ENST00000579211 MAP1LC3AQ9H492 121 aa11.39□□□□□ -0.59
ITGB4-205ENST00000579211 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.38□□□□□ -0.59
ITGB4-205ENST00000579211 FAM229AH3BQW9 127 aa11.38□□□□□ -0.59
ITGB4-205ENST00000579211 CCL25O15444 150 aa11.38□□□□□ -0.59
ITGB4-205ENST00000579211 KRTAP4-5Q9BYR2 181 aa11.38□□□□□ -0.59
ITGB4-205ENST00000579211 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
ITGB4-205ENST00000579211 UBE2D4Q9Y2X8 147 aa11.38□□□□□ -0.59
ITGB4-205ENST00000579211 CSDC2Q9Y534 153 aaKnown RBP11.38□□□□□ -0.59
ITGB4-205ENST00000579211 RPL39P62891 51 aaKnown RBP11.36□□□□□ -0.59
ITGB4-205ENST00000579211 RNASE13Q5GAN3 156 aaKnown RBP11.36□□□□□ -0.59
ITGB4-205ENST00000579211 TIMM21Q9BVV7 248 aa11.36□□□□□ -0.59
ITGB4-205ENST00000579211 KRTAP17-1Q9BYP8 105 aa11.36□□□□□ -0.59
ITGB4-205ENST00000579211 TRAV9-1A0A075B6T8 112 aa11.35□□□□□ -0.59
ITGB4-205ENST00000579211 C1orf196B1AJZ1 125 aa11.35□□□□□ -0.59
ITGB4-205ENST00000579211 HIGD2BQ4VC39 106 aa11.35□□□□□ -0.59
ITGB4-205ENST00000579211 Q5VSD8 79 aa11.35□□□□□ -0.59
ITGB4-205ENST00000579211 C9orf163Q8N9P6 203 aa11.35□□□□□ -0.59
ITGB4-205ENST00000579211 RPS10P5Q9NQ39 176 aa11.35□□□□□ -0.59
ITGB4-205ENST00000579211 TRAV13-1A0A0B4J241 112 aa11.34□□□□□ -0.59
ITGB4-205ENST00000579211 FOXI1Q12951 378 aa11.34□□□□□ -0.59
ITGB4-205ENST00000579211 RHEBQ15382 184 aa11.33□□□□□ -0.6
ITGB4-205ENST00000579211 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.6
ITGB4-205ENST00000579211 Q6ZSA8 131 aa11.33□□□□□ -0.6
ITGB4-205ENST00000579211 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
ITGB4-205ENST00000579211 SPANXA1Q9NS26 97 aa11.33□□□□□ -0.6
ITGB4-205ENST00000579211 IGHV3-64A0A075B6Q5 118 aa11.32□□□□□ -0.6
ITGB4-205ENST00000579211 MALP21145 153 aa11.32□□□□□ -0.6
ITGB4-205ENST00000579211 IFI27P40305 119 aaPredicted RBP11.32□□□□□ -0.6
ITGB4-205ENST00000579211 CNBPP62633 177 aaKnown RBP11.32□□□□□ -0.6
ITGB4-205ENST00000579211 NDUFA5Q16718 116 aa11.32□□□□□ -0.6
ITGB4-205ENST00000579211 C10orf91Q5T1B1 145 aa11.32□□□□□ -0.6
ITGB4-205ENST00000579211 Q6ZUT4 128 aa11.32□□□□□ -0.6
ITGB4-205ENST00000579211 Q8N8P6 123 aa11.32□□□□□ -0.6
ITGB4-205ENST00000579211 DPH3Q96FX2 82 aa11.32□□□□□ -0.6
ITGB4-205ENST00000579211 CARHSP1Q9Y2V2 147 aaKnown RBP11.32□□□□□ -0.6
ITGB4-205ENST00000579211 PCLOQ9Y6V0 5065 aa11.32□□□□□ -0.6
ITGB4-205ENST00000579211 IGHV1-58A0A0C4DH39 117 aa11.31□□□□□ -0.6
ITGB4-205ENST00000579211 PRSS47A8MTI9 375 aa11.31□□□□□ -0.6
ITGB4-205ENST00000579211 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
ITGB4-205ENST00000579211 ZNF561-AS1K7EIQ3 104 aa11.3□□□□□ -0.6
ITGB4-205ENST00000579211 APOC3P02656 99 aa11.3□□□□□ -0.6
ITGB4-205ENST00000579211 KIAA1644Q3SXP7 199 aa11.3□□□□□ -0.6
ITGB4-205ENST00000579211 COX19Q49B96 90 aa11.3□□□□□ -0.6
ITGB4-205ENST00000579211 ORMDL2Q53FV1 153 aa11.3□□□□□ -0.6
ITGB4-205ENST00000579211 SCXQ7RTU7 201 aa11.3□□□□□ -0.6
ITGB4-205ENST00000579211 COX7A2LO14548 114 aa11.29□□□□□ -0.6
ITGB4-205ENST00000579211 OPRPNQ99935 248 aaPredicted RBP11.29□□□□□ -0.6
ITGB4-205ENST00000579211 GVQW2A0A096LPI5 108 aaPredicted RBP11.28□□□□□ -0.6
ITGB4-205ENST00000579211 MRPS36P82909 103 aaKnown RBP11.28□□□□□ -0.6
ITGB4-205ENST00000579211 CIRBP-AS1Q8TBR5 109 aa11.28□□□□□ -0.6
ITGB4-205ENST00000579211 GNB1LQ9BYB4 327 aa11.28□□□□□ -0.6
ITGB4-205ENST00000579211 NXT2Q9NPJ8 142 aaKnown RBP11.28□□□□□ -0.6
ITGB4-205ENST00000579211 CYSLTR1Q9Y271 337 aa11.28□□□□□ -0.6
ITGB4-205ENST00000579211 DNAH8Q96JB1 4490 aa11.28□□□□□ -0.6
ITGB4-205ENST00000579211 IFITM10A6NMD0 228 aa11.27□□□□□ -0.61
ITGB4-205ENST00000579211 K7EMI3 77 aa11.27□□□□□ -0.61
ITGB4-205ENST00000579211 APOMO95445 188 aa11.27□□□□□ -0.61
ITGB4-205ENST00000579211 SLPIP03973 132 aa11.27□□□□□ -0.61
ITGB4-205ENST00000579211 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.61
ITGB4-205ENST00000579211 G0S2P27469 103 aa11.27□□□□□ -0.61
ITGB4-205ENST00000579211 SDIM1Q6ZPB5 146 aa11.27□□□□□ -0.61
ITGB4-205ENST00000579211 LINC00528Q8N1L1 170 aa11.27□□□□□ -0.61
ITGB4-205ENST00000579211 ABCA13Q86UQ4 5058 aa11.26□□□□□ -0.61
ITGB4-205ENST00000579211 SNAPINO95295 136 aa11.26□□□□□ -0.61
ITGB4-205ENST00000579211 PLA2G1BP04054 148 aaKnown RBP11.26□□□□□ -0.61
ITGB4-205ENST00000579211 C5orf38Q86SI9 138 aa11.26□□□□□ -0.61
ITGB4-205ENST00000579211 PRSS3P2Q8NHM4 247 aa11.26□□□□□ -0.61
ITGB4-205ENST00000579211 PYGO1Q9Y3Y4 419 aa11.26□□□□□ -0.61
ITGB4-205ENST00000579211 SRRM2Q9UQ35 2752 aaKnown RBP11.26□□□□□ -0.61
ITGB4-205ENST00000579211 MT-ND6P03923 174 aa11.25□□□□□ -0.61
ITGB4-205ENST00000579211 FABP9Q0Z7S8 132 aa11.25□□□□□ -0.61
ITGB4-205ENST00000579211 C2orf66Q6UXQ4 117 aa11.25□□□□□ -0.61
ITGB4-205ENST00000579211 Q6ZN92 141 aa11.25□□□□□ -0.61
ITGB4-205ENST00000579211 SVBPQ8N300 66 aa11.25□□□□□ -0.61
ITGB4-205ENST00000579211 LINC00526Q96FQ7 95 aa11.25□□□□□ -0.61
ITGB4-205ENST00000579211 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms