RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 ATP7AQ04656 1500 aa3.07□□□□□ -1.92
BRIP1-202ENST00000577598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.07□□□□□ -1.92
BRIP1-202ENST00000577598 CHD8Q9HCK8 2581 aa3.07□□□□□ -1.92
BRIP1-202ENST00000577598 C10orf142B7Z368 130 aa3.07□□□□□ -1.92
BRIP1-202ENST00000577598 MED14O60244 1454 aa3.07□□□□□ -1.92
BRIP1-202ENST00000577598 DOCK1Q14185 1865 aa3.07□□□□□ -1.92
BRIP1-202ENST00000577598 USP32Q8NFA0 1604 aa3.07□□□□□ -1.92
BRIP1-202ENST00000577598 TRBV6-4A0A1B0GX49 114 aa3.07□□□□□ -1.92
BRIP1-202ENST00000577598 CGAP01215 116 aa3.07□□□□□ -1.92
BRIP1-202ENST00000577598 MAPK1IP1LQ8NDC0 245 aa3.07□□□□□ -1.92
BRIP1-202ENST00000577598 KDM6AO15550 1401 aaPredicted RBP3.07□□□□□ -1.92
BRIP1-202ENST00000577598 CXorf51AA0A1B0GTR3 108 aa3.06□□□□□ -1.92
BRIP1-202ENST00000577598 TRBV7-1A0A0A6YYK4 115 aa3.06□□□□□ -1.92
BRIP1-202ENST00000577598 RICTORQ6R327 1708 aa3.06□□□□□ -1.92
BRIP1-202ENST00000577598 TRPM2O94759 1503 aa3.06□□□□□ -1.92
BRIP1-202ENST00000577598 IGKV3-7A0A075B6H7 116 aa3.06□□□□□ -1.92
BRIP1-202ENST00000577598 A0A0D9SFI3 127 aa3.06□□□□□ -1.92
BRIP1-202ENST00000577598 OBSCN-AS1Q96MR7 158 aa3.06□□□□□ -1.92
BRIP1-202ENST00000577598 KNDC1Q76NI1 1749 aa3.06□□□□□ -1.92
BRIP1-202ENST00000577598 TRBV25-1A0A075B6N4 114 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 IGKV3OR2-268A0A0C4DH90 116 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 TXNDC17Q9BRA2 123 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 SETBP1Q9Y6X0 1596 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 WNK1Q9H4A3 2382 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 ANKRD50Q9ULJ7 1429 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 IGKV1-17P01599 117 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 GDF5OSQ5U4N7 250 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 PATE1Q8WXA2 126 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 PRO0461Q9UI25 63 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 ROS1P08922 2347 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 FAM208BQ5VWN6 2430 aa3.05□□□□□ -1.92
BRIP1-202ENST00000577598 CEP192Q8TEP8 1941 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 LINC01549A6NIU2 74 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 IGKV4-1P06312 121 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 IGLV3-19P01714 112 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 IFI6P09912 130 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 CRIPTQ9P021 101 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 LRP5O75197 1615 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 ADGRL1O94910 1474 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 ZNF646O15015 1829 aaPredicted RBP3.04□□□□□ -1.92
BRIP1-202ENST00000577598 EFCAB6Q5THR3 1501 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 PCNX1Q96RV3 2341 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 NOTCH3Q9UM47 2321 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.04□□□□□ -1.92
BRIP1-202ENST00000577598 GAFA1Q96PS6 74 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 USF3Q68DE3 2245 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 IQSEC2Q5JU85 1478 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 LRRC7Q96NW7 1537 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 ADGRB2O60241 1585 aa3.04□□□□□ -1.92
BRIP1-202ENST00000577598 NRXN1Q9ULB1 1477 aa3.03□□□□□ -1.92
BRIP1-202ENST00000577598 C10orf113Q5VZT2 155 aa3.03□□□□□ -1.92
BRIP1-202ENST00000577598 Q6JHZ5 121 aa3.03□□□□□ -1.92
BRIP1-202ENST00000577598 ZNF142P52746 1687 aaPredicted RBP3.03□□□□□ -1.92
BRIP1-202ENST00000577598 CLTCQ00610 1675 aaKnown RBP3.03□□□□□ -1.92
BRIP1-202ENST00000577598 TRBV6-5A0A0K0K1A5 114 aa3.03□□□□□ -1.92
BRIP1-202ENST00000577598 COL2A1P02458 1487 aaPredicted RBP3.03□□□□□ -1.92
BRIP1-202ENST00000577598 AKAP12Q02952 1782 aa3.03□□□□□ -1.92
BRIP1-202ENST00000577598 HECTD1Q9ULT8 2610 aa3.03□□□□□ -1.92
BRIP1-202ENST00000577598 CLTCL1P53675 1640 aa3.03□□□□□ -1.93
BRIP1-202ENST00000577598 IFI27P40305 119 aaPredicted RBP3.02□□□□□ -1.93
BRIP1-202ENST00000577598 CCL19Q99731 98 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 TP53TG3Q9ULZ0 132 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 PIEZO2Q9H5I5 2752 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 ACACAQ13085 2346 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 MARF1Q9Y4F3 1742 aaKnown RBP3.02□□□□□ -1.93
BRIP1-202ENST00000577598 FRMPD1Q5SYB0 1578 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 IGLV4-60A0A075B6I1 120 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 SPACA4Q8TDM5 124 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 MYH8P13535 1937 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 TTC28Q96AY4 2481 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 COX8AP10176 69 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 DIP2CQ9Y2E4 1556 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 ASXL1Q8IXJ9 1541 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 TUBGCP6Q96RT7 1819 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 BRD3OSQ6XYD6 125 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 Q6ZQY7 126 aa3.02□□□□□ -1.93
BRIP1-202ENST00000577598 SYCP2Q9BX26 1530 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 ZFYVE26Q68DK2 2539 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 CISD3P0C7P0 127 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 LINC00299Q6ZSB3 139 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 PPLO60437 1756 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 CASZ1Q86V15 1759 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 KIDINS220Q9ULH0 1771 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 CEP290O15078 2479 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 SHANK3Q9BYB0 1731 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 IGHV3-30P01768 117 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 MGPP08493 103 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 IGHV3-30-5P0DP03 117 aa3.01□□□□□ -1.93
BRIP1-202ENST00000577598 ELOF1P60002 83 aaKnown RBP3.01□□□□□ -1.93
BRIP1-202ENST00000577598 ZNF625Q96I27 306 aaPredicted RBP3.01□□□□□ -1.93
BRIP1-202ENST00000577598 CCL3L1P16619 93 aa3□□□□□ -1.93
BRIP1-202ENST00000577598 NYNRINQ9P2P1 1898 aaKnown RBP3□□□□□ -1.93
BRIP1-202ENST00000577598 NEXMIFQ5QGS0 1516 aa3□□□□□ -1.93
BRIP1-202ENST00000577598 LTBP1Q14766 1721 aa3□□□□□ -1.93
BRIP1-202ENST00000577598 SPINK4O60575 86 aa3□□□□□ -1.93
BRIP1-202ENST00000577598 UBE2D3P61077 147 aa3□□□□□ -1.93
BRIP1-202ENST00000577598 UBE2D2P62837 147 aa3□□□□□ -1.93
BRIP1-202ENST00000577598 ATXN8Q156A1 80 aa3□□□□□ -1.93
BRIP1-202ENST00000577598 VMO1Q7Z5L0 202 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms