RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 OSTCQ9NRP0 149 aa2.67□□□□□ -1.98
NUP88-213ENST00000576862 EPDR1Q9UM22 224 aa2.67□□□□□ -1.98
NUP88-213ENST00000576862 ABCA4P78363 2273 aa2.67□□□□□ -1.98
NUP88-213ENST00000576862 CHD6Q8TD26 2715 aa2.67□□□□□ -1.98
NUP88-213ENST00000576862 HIVEP3Q5T1R4 2406 aa2.67□□□□□ -1.98
NUP88-213ENST00000576862 CACNA1BQ00975 2339 aa2.67□□□□□ -1.98
NUP88-213ENST00000576862 SPTBN1Q01082 2364 aaKnown RBP2.66□□□□□ -1.98
NUP88-213ENST00000576862 FAM208BQ5VWN6 2430 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.66□□□□□ -1.98
NUP88-213ENST00000576862 TRAV3A0A0B4J244 114 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 PIGBOS1A0A0B4J2F0 54 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 H3BQ15 152 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 K7ERS5 55 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 LEPROTO15243 131 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 IAPPP10997 89 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 SNCAP37840 140 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 SNRPD3P62318 126 aaKnown RBP2.66□□□□□ -1.98
NUP88-213ENST00000576862 PEA15Q15121 130 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 ASB16-AS1Q495Z4 193 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 SPINK9Q5DT21 86 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 ZNF833PQ6ZTB9 187 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 MIR17HGQ75NE6 70 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 HIST3H2BBQ8N257 126 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 Q8N2B8 174 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 PTPN13Q12923 2485 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 NAV2Q8IVL1 2488 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 ADGRG4Q8IZF6 3080 aa2.66□□□□□ -1.98
NUP88-213ENST00000576862 MYO7BQ6PIF6 2116 aa2.65□□□□□ -1.98
NUP88-213ENST00000576862 F8W1H4 67 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 HYPMO75409 117 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 APCSP02743 223 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 IGKV1-16P04430 117 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 FABP4P15090 132 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 HLA-DMBP28068 263 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 ZNF137PP52743 207 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 EFNA4P52798 201 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 C10orf91Q5T1B1 145 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 SPATA12Q7Z6I5 190 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 AMN1Q8IY45 258 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 TMEM256Q8N2U0 113 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 OR8B3Q8NGG8 313 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 OR8B2Q96RD0 313 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 NABP2Q9BQ15 211 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 NPVFQ9HCQ7 196 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 SMCO4Q9NRQ5 59 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 PSENENQ9NZ42 101 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 PHLDA3Q9Y5J5 127 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 POLQO75417 2590 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 UBR5O95071 2799 aaPredicted RBP2.65□□□□□ -1.99
NUP88-213ENST00000576862 NBEAQ8NFP9 2946 aa2.65□□□□□ -1.99
NUP88-213ENST00000576862 SPG11Q96JI7 2443 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 USP9YO00507 2555 aaPredicted RBP2.64□□□□□ -1.99
NUP88-213ENST00000576862 BSNQ9UPA5 3926 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 TMEM223A0PJW6 202 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 CEBPZOSA8MTT3 80 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 ODF3BA8MYP8 253 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 OOSP1A8MZH6 123 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 C3orf84H3BNL1 204 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 TCL1BO95988 128 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 APOC3P02656 99 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 SAA1P0DJI8 122 aaPredicted RBP2.64□□□□□ -1.99
NUP88-213ENST00000576862 ASIPP42127 132 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 SPANXN5Q5MJ07 72 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 HCP5Q6MZN7 132 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 C3orf56Q8N813 242 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 SCGB3A1Q96QR1 104 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 TMEM14BQ9NUH8 114 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 CACFD1Q9UGQ2 172 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 ICE1Q9Y2F5 2266 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 CACNA1DQ01668 2161 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 USF3Q68DE3 2245 aa2.64□□□□□ -1.99
NUP88-213ENST00000576862 RELNP78509 3460 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 HRNRQ86YZ3 2850 aaPredicted RBP2.63□□□□□ -1.99
NUP88-213ENST00000576862 ABCA12Q86UK0 2595 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 ZGRF1Q86YA3 2104 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 AKAP6Q13023 2319 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 DIDO1Q9BTC0 2240 aaKnown RBP2.63□□□□□ -1.99
NUP88-213ENST00000576862 IGHV1-3A0A0C4DH29 117 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 UBE2L5PA0A1B0GUS4 154 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 GRIFINA4D1Z8 144 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 M0R1W7 72 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 CD28P10747 220 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 CMC4P56277 68 aaPredicted RBP2.63□□□□□ -1.99
NUP88-213ENST00000576862 PRCDQ00LT1 54 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 C10orf55Q5SWW7 151 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 PRR9Q5T870 116 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 CLDND2Q8NHS1 167 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 FAM213BQ8TBF2 198 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 TMEM167AQ8TBQ9 72 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 BPESC1Q9GZL8 116 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 UQCR10Q9UDW1 63 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 RABAC1Q9UI14 185 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 DSCAML1Q8TD84 2053 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 SMG1Q96Q15 3661 aaKnown RBP2.63□□□□□ -1.99
NUP88-213ENST00000576862 MALRD1Q5VYJ5 2156 aa2.63□□□□□ -1.99
NUP88-213ENST00000576862 ESPL1Q14674 2120 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 CENPEQ02224 2701 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 UMAD1C9J7I0 102 aa2.62□□□□□ -1.99
NUP88-213ENST00000576862 E7EUB6 86 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms