RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 SLC7A5P1Q8MH63 180 aa8.47□□□□□ -1.05
CDT1-203ENST00000569140 USP17L23D6RBM5 183 aa8.46□□□□□ -1.06
CDT1-203ENST00000569140 RNASE13Q5GAN3 156 aaKnown RBP8.46□□□□□ -1.06
CDT1-203ENST00000569140 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.06
CDT1-203ENST00000569140 TGIF2-C20orf24A0A0A6YYL0 155 aa8.45□□□□□ -1.06
CDT1-203ENST00000569140 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
CDT1-203ENST00000569140 RPL39P62891 51 aaKnown RBP8.45□□□□□ -1.06
CDT1-203ENST00000569140 COX19Q49B96 90 aa8.45□□□□□ -1.06
CDT1-203ENST00000569140 C14orf177Q52M58 125 aa8.45□□□□□ -1.06
CDT1-203ENST00000569140 MRPL52Q86TS9 123 aaKnown RBP8.45□□□□□ -1.06
CDT1-203ENST00000569140 ZNF664Q8N3J9 261 aa8.45□□□□□ -1.06
CDT1-203ENST00000569140 GNB1LQ9BYB4 327 aa8.45□□□□□ -1.06
CDT1-203ENST00000569140 UBE2D4Q9Y2X8 147 aa8.45□□□□□ -1.06
CDT1-203ENST00000569140 GCSHP23434 173 aa8.44□□□□□ -1.06
CDT1-203ENST00000569140 XCL1P47992 114 aa8.44□□□□□ -1.06
CDT1-203ENST00000569140 FABP9Q0Z7S8 132 aa8.44□□□□□ -1.06
CDT1-203ENST00000569140 Q8N8P6 123 aa8.44□□□□□ -1.06
CDT1-203ENST00000569140 CHCHD10Q8WYQ3 142 aaPredicted RBP8.44□□□□□ -1.06
CDT1-203ENST00000569140 MRPL18Q9H0U6 180 aaKnown RBP8.44□□□□□ -1.06
CDT1-203ENST00000569140 PKHD1P08F94 4074 aa8.43□□□□□ -1.06
CDT1-203ENST00000569140 DNAH11Q96DT5 4516 aa8.43□□□□□ -1.06
CDT1-203ENST00000569140 MT-ND6P03923 174 aa8.43□□□□□ -1.06
CDT1-203ENST00000569140 SS18Q15532 418 aa8.43□□□□□ -1.06
CDT1-203ENST00000569140 Q6ZUT4 128 aa8.43□□□□□ -1.06
CDT1-203ENST00000569140 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
CDT1-203ENST00000569140 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
CDT1-203ENST00000569140 LINC00959A0A1B0GUT2 108 aa8.42□□□□□ -1.06
CDT1-203ENST00000569140 CCL25O15444 150 aa8.42□□□□□ -1.06
CDT1-203ENST00000569140 IFI27P40305 119 aaPredicted RBP8.42□□□□□ -1.06
CDT1-203ENST00000569140 KRTAP26-1Q6PEX3 210 aa8.42□□□□□ -1.06
CDT1-203ENST00000569140 NXT2Q9NPJ8 142 aaKnown RBP8.42□□□□□ -1.06
CDT1-203ENST00000569140 TRAPPC1Q9Y5R8 145 aa8.42□□□□□ -1.06
CDT1-203ENST00000569140 hDV102S1A0JD36 115 aa8.41□□□□□ -1.06
CDT1-203ENST00000569140 KRTAP10-1P60331 282 aa8.41□□□□□ -1.06
CDT1-203ENST00000569140 PRSS3P2Q8NHM4 247 aa8.41□□□□□ -1.06
CDT1-203ENST00000569140 TIMM21Q9BVV7 248 aa8.41□□□□□ -1.06
CDT1-203ENST00000569140 SPANXA1Q9NS26 97 aa8.41□□□□□ -1.06
CDT1-203ENST00000569140 PRSS47A8MTI9 375 aa8.4□□□□□ -1.06
CDT1-203ENST00000569140 LINC01620Q4KN68 170 aa8.4□□□□□ -1.06
CDT1-203ENST00000569140 ORMDL2Q53FV1 153 aa8.4□□□□□ -1.06
CDT1-203ENST00000569140 OPRPNQ99935 248 aaPredicted RBP8.4□□□□□ -1.06
CDT1-203ENST00000569140 CYSLTR1Q9Y271 337 aa8.4□□□□□ -1.06
CDT1-203ENST00000569140 CSDC2Q9Y534 153 aaKnown RBP8.4□□□□□ -1.06
CDT1-203ENST00000569140 DYNC1H1Q14204 4646 aaKnown RBP8.4□□□□□ -1.07
CDT1-203ENST00000569140 IFITM10A6NMD0 228 aa8.39□□□□□ -1.07
CDT1-203ENST00000569140 PRSS1P07477 247 aa8.39□□□□□ -1.07
CDT1-203ENST00000569140 CFAP161Q6P656 301 aa8.39□□□□□ -1.07
CDT1-203ENST00000569140 C2orf66Q6UXQ4 117 aa8.39□□□□□ -1.07
CDT1-203ENST00000569140 CBLN2Q8IUK8 224 aa8.39□□□□□ -1.07
CDT1-203ENST00000569140 ALKBH7Q9BT30 221 aaPredicted RBP8.39□□□□□ -1.07
CDT1-203ENST00000569140 SMCO4Q9NRQ5 59 aa8.39□□□□□ -1.07
CDT1-203ENST00000569140 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
CDT1-203ENST00000569140 FOXI1Q12951 378 aa8.38□□□□□ -1.07
CDT1-203ENST00000569140 HIGD2BQ4VC39 106 aa8.38□□□□□ -1.07
CDT1-203ENST00000569140 FA2HQ7L5A8 372 aa8.38□□□□□ -1.07
CDT1-203ENST00000569140 C1orf196B1AJZ1 125 aa8.37□□□□□ -1.07
CDT1-203ENST00000569140 K7EMI3 77 aa8.37□□□□□ -1.07
CDT1-203ENST00000569140 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
CDT1-203ENST00000569140 MALP21145 153 aa8.37□□□□□ -1.07
CDT1-203ENST00000569140 HAMPP81172 84 aa8.37□□□□□ -1.07
CDT1-203ENST00000569140 Q6ZN92 141 aa8.37□□□□□ -1.07
CDT1-203ENST00000569140 G0S2P27469 103 aa8.36□□□□□ -1.07
CDT1-203ENST00000569140 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
CDT1-203ENST00000569140 CD164L2Q6UWJ8 174 aa8.36□□□□□ -1.07
CDT1-203ENST00000569140 TEX43Q6ZNM6 134 aa8.36□□□□□ -1.07
CDT1-203ENST00000569140 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
CDT1-203ENST00000569140 KIAA1109Q2LD37 5005 aa8.35□□□□□ -1.07
CDT1-203ENST00000569140 IGLV4-3A0A075B6K6 122 aa8.35□□□□□ -1.07
CDT1-203ENST00000569140 C15orf56Q8N910 161 aa8.35□□□□□ -1.07
CDT1-203ENST00000569140 C2orf88Q9BSF0 95 aa8.35□□□□□ -1.07
CDT1-203ENST00000569140 IGHV1-58A0A0C4DH39 117 aa8.34□□□□□ -1.07
CDT1-203ENST00000569140 COX7A2LO14548 114 aa8.34□□□□□ -1.07
CDT1-203ENST00000569140 PYGO1Q9Y3Y4 419 aa8.34□□□□□ -1.07
CDT1-203ENST00000569140 DNAH5Q8TE73 4624 aa8.34□□□□□ -1.07
CDT1-203ENST00000569140 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.33□□□□□ -1.08
CDT1-203ENST00000569140 ZC2HC1BQ5TFG8 222 aa8.33□□□□□ -1.08
CDT1-203ENST00000569140 C5orf38Q86SI9 138 aa8.33□□□□□ -1.08
CDT1-203ENST00000569140 SCGB3A1Q96QR1 104 aa8.33□□□□□ -1.08
CDT1-203ENST00000569140 VCX2Q9H322 139 aa8.33□□□□□ -1.08
CDT1-203ENST00000569140 ZNF561-AS1K7EIQ3 104 aa8.32□□□□□ -1.08
CDT1-203ENST00000569140 C18orf32Q8TCD1 76 aa8.32□□□□□ -1.08
CDT1-203ENST00000569140 FAM104AQ969W3 186 aa8.32□□□□□ -1.08
CDT1-203ENST00000569140 TOMM6Q96B49 74 aa8.32□□□□□ -1.08
CDT1-203ENST00000569140 LINC00526Q96FQ7 95 aa8.32□□□□□ -1.08
CDT1-203ENST00000569140 YPEL4Q96NS1 127 aa8.32□□□□□ -1.08
CDT1-203ENST00000569140 RYR1P21817 5038 aa8.31□□□□□ -1.08
CDT1-203ENST00000569140 APOMO95445 188 aa8.31□□□□□ -1.08
CDT1-203ENST00000569140 PAPPA-AS1Q5QFB9 102 aa8.31□□□□□ -1.08
CDT1-203ENST00000569140 FAM30AQ9NZY2 134 aa8.31□□□□□ -1.08
CDT1-203ENST00000569140 LRP1BQ9NZR2 4599 aa8.31□□□□□ -1.08
CDT1-203ENST00000569140 IGHV3-64A0A075B6Q5 118 aa8.3□□□□□ -1.08
CDT1-203ENST00000569140 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
CDT1-203ENST00000569140 IGIPA6NJ69 53 aa8.3□□□□□ -1.08
CDT1-203ENST00000569140 XGP55808 180 aa8.3□□□□□ -1.08
CDT1-203ENST00000569140 CNBPP62633 177 aaKnown RBP8.3□□□□□ -1.08
CDT1-203ENST00000569140 TIMM17AQ99595 171 aa8.3□□□□□ -1.08
CDT1-203ENST00000569140 HERC2O95714 4834 aa8.29□□□□□ -1.08
CDT1-203ENST00000569140 LINC00614P0C842 121 aa8.29□□□□□ -1.08
CDT1-203ENST00000569140 RAB5BP61020 215 aa8.29□□□□□ -1.08
CDT1-203ENST00000569140 PMCHL1Q16048 86 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms