RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 TIMM21Q9BVV7 248 aa17.31■□□□□ 0.36
NME3-209ENST00000566600 NXT2Q9NPJ8 142 aaKnown RBP17.31■□□□□ 0.36
NME3-209ENST00000566600 K7EMI3 77 aa17.3■□□□□ 0.36
NME3-209ENST00000566600 FABP9Q0Z7S8 132 aa17.3■□□□□ 0.36
NME3-209ENST00000566600 UBE2D4Q9Y2X8 147 aa17.3■□□□□ 0.36
NME3-209ENST00000566600 IGLV10-54A0A075B6I4 117 aa17.29■□□□□ 0.36
NME3-209ENST00000566600 C16orf90A8MZG2 172 aa17.29■□□□□ 0.36
NME3-209ENST00000566600 ZNF664Q8N3J9 261 aa17.29■□□□□ 0.36
NME3-209ENST00000566600 Q8N814 137 aa17.29■□□□□ 0.36
NME3-209ENST00000566600 CDC42SE2Q9NRR3 84 aa17.29■□□□□ 0.36
NME3-209ENST00000566600 NTN5Q8WTR8 489 aaPredicted RBP17.28■□□□□ 0.36
NME3-209ENST00000566600 SMCO4Q9NRQ5 59 aa17.28■□□□□ 0.36
NME3-209ENST00000566600 IGKV3OR2-268A0A0C4DH90 116 aa17.27■□□□□ 0.36
NME3-209ENST00000566600 ALKBH7Q9BT30 221 aaPredicted RBP17.27■□□□□ 0.36
NME3-209ENST00000566600 TRAPPC1Q9Y5R8 145 aa17.27■□□□□ 0.36
NME3-209ENST00000566600 LECT2O14960 151 aa17.26■□□□□ 0.35
NME3-209ENST00000566600 ORMDL2Q53FV1 153 aa17.26■□□□□ 0.35
NME3-209ENST00000566600 KRTAP26-1Q6PEX3 210 aa17.26■□□□□ 0.35
NME3-209ENST00000566600 SPANXA1Q9NS26 97 aa17.26■□□□□ 0.35
NME3-209ENST00000566600 DNAH11Q96DT5 4516 aa17.26■□□□□ 0.35
NME3-209ENST00000566600 PKHD1P08F94 4074 aa17.25■□□□□ 0.35
NME3-209ENST00000566600 RPL39P62891 51 aaKnown RBP17.25■□□□□ 0.35
NME3-209ENST00000566600 WFDC2Q14508 124 aa17.25■□□□□ 0.35
NME3-209ENST00000566600 C14orf177Q52M58 125 aa17.25■□□□□ 0.35
NME3-209ENST00000566600 YPEL4Q96NS1 127 aa17.24■□□□□ 0.35
NME3-209ENST00000566600 BIRC6Q9NR09 4857 aa17.23■□□□□ 0.35
NME3-209ENST00000566600 IFI27P40305 119 aaPredicted RBP17.23■□□□□ 0.35
NME3-209ENST00000566600 G0S2P27469 103 aa17.22■□□□□ 0.35
NME3-209ENST00000566600 PRSS3P2Q8NHM4 247 aa17.22■□□□□ 0.35
NME3-209ENST00000566600 CHCHD10Q8WYQ3 142 aaPredicted RBP17.22■□□□□ 0.35
NME3-209ENST00000566600 LINC00959A0A1B0GUT2 108 aa17.21■□□□□ 0.35
NME3-209ENST00000566600 SS18Q15532 418 aa17.21■□□□□ 0.35
NME3-209ENST00000566600 CBLN2Q8IUK8 224 aa17.21■□□□□ 0.35
NME3-209ENST00000566600 IGLV5-52A0A0A0MRZ9 124 aa17.2■□□□□ 0.34
NME3-209ENST00000566600 CCL25O15444 150 aa17.2■□□□□ 0.34
NME3-209ENST00000566600 CYSLTR1Q9Y271 337 aa17.2■□□□□ 0.34
NME3-209ENST00000566600 PYGO1Q9Y3Y4 419 aa17.2■□□□□ 0.34
NME3-209ENST00000566600 GAGE12HA6NDE8 117 aa17.19■□□□□ 0.34
NME3-209ENST00000566600 USP17L23D6RBM5 183 aa17.19■□□□□ 0.34
NME3-209ENST00000566600 MRPS36P82909 103 aaKnown RBP17.19■□□□□ 0.34
NME3-209ENST00000566600 Q6ZUT4 128 aa17.19■□□□□ 0.34
NME3-209ENST00000566600 FUSP35637 526 aaKnown RBP eCLIP17.17■□□□□ 0.34
NME3-209ENST00000566600 C2orf66Q6UXQ4 117 aa17.17■□□□□ 0.34
NME3-209ENST00000566600 C1orf196B1AJZ1 125 aa17.16■□□□□ 0.34
NME3-209ENST00000566600 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.15■□□□□ 0.34
NME3-209ENST00000566600 XCL1P47992 114 aa17.15■□□□□ 0.34
NME3-209ENST00000566600 RNASE13Q5GAN3 156 aaKnown RBP17.15■□□□□ 0.34
NME3-209ENST00000566600 LINC01546A6NGU7 62 aa17.14■□□□□ 0.33
NME3-209ENST00000566600 GCSHP23434 173 aa17.14■□□□□ 0.33
NME3-209ENST00000566600 CFAP161Q6P656 301 aa17.14■□□□□ 0.33
NME3-209ENST00000566600 FA2HQ7L5A8 372 aa17.14■□□□□ 0.33
NME3-209ENST00000566600 TRAV13-1A0A0B4J241 112 aa17.12■□□□□ 0.33
NME3-209ENST00000566600 LINC01549A6NIU2 74 aa17.12■□□□□ 0.33
NME3-209ENST00000566600 NPSP0C0P6 89 aa17.12■□□□□ 0.33
NME3-209ENST00000566600 FOXI1Q12951 378 aa17.12■□□□□ 0.33
NME3-209ENST00000566600 CD164L2Q6UWJ8 174 aa17.12■□□□□ 0.33
NME3-209ENST00000566600 FAM104AQ969W3 186 aa17.12■□□□□ 0.33
NME3-209ENST00000566600 OPRPNQ99935 248 aaPredicted RBP17.12■□□□□ 0.33
NME3-209ENST00000566600 C18orf32Q8TCD1 76 aa17.11■□□□□ 0.33
NME3-209ENST00000566600 TMEM141Q96I45 108 aa17.11■□□□□ 0.33
NME3-209ENST00000566600 IGLV4-3A0A075B6K6 122 aa17.1■□□□□ 0.33
NME3-209ENST00000566600 PRSS1P07477 247 aa17.1■□□□□ 0.33
NME3-209ENST00000566600 DYNC1H1Q14204 4646 aaKnown RBP17.1■□□□□ 0.33
NME3-209ENST00000566600 IFITM10A6NMD0 228 aa17.09■□□□□ 0.33
NME3-209ENST00000566600 Q6ZN92 141 aa17.09■□□□□ 0.33
NME3-209ENST00000566600 TOMM6Q96B49 74 aa17.09■□□□□ 0.33
NME3-209ENST00000566600 hDV102S1A0JD36 115 aa17.07■□□□□ 0.32
NME3-209ENST00000566600 IGIPA6NJ69 53 aa17.07■□□□□ 0.32
NME3-209ENST00000566600 RAB5BP61020 215 aa17.07■□□□□ 0.32
NME3-209ENST00000566600 PAPPA-AS1Q5QFB9 102 aa17.07■□□□□ 0.32
NME3-209ENST00000566600 TEX43Q6ZNM6 134 aa17.07■□□□□ 0.32
NME3-209ENST00000566600 AP5S1Q9NUS5 200 aa17.07■□□□□ 0.32
NME3-209ENST00000566600 TIMM17AQ99595 171 aa17.06■□□□□ 0.32
NME3-209ENST00000566600 CDK2AP2O75956 126 aa17.05■□□□□ 0.32
NME3-209ENST00000566600 LINC00614P0C842 121 aa17.05■□□□□ 0.32
NME3-209ENST00000566600 KRTAP10-1P60331 282 aa17.05■□□□□ 0.32
NME3-209ENST00000566600 C15orf56Q8N910 161 aa17.05■□□□□ 0.32
NME3-209ENST00000566600 C2orf88Q9BSF0 95 aa17.05■□□□□ 0.32
NME3-209ENST00000566600 VCX2Q9H322 139 aa17.05■□□□□ 0.32
NME3-209ENST00000566600 COX7A2LO14548 114 aa17.04■□□□□ 0.32
NME3-209ENST00000566600 ERASQ7Z444 233 aa17.04■□□□□ 0.32
NME3-209ENST00000566600 SCGB3A1Q96QR1 104 aa17.04■□□□□ 0.32
NME3-209ENST00000566600 IGHV1-58A0A0C4DH39 117 aa17.03■□□□□ 0.32
NME3-209ENST00000566600 DNAH5Q8TE73 4624 aa17.03■□□□□ 0.32
NME3-209ENST00000566600 COLCA2A8K830 154 aa17.02■□□□□ 0.32
NME3-209ENST00000566600 MALP21145 153 aa17.02■□□□□ 0.32
NME3-209ENST00000566600 AMELXQ99217 191 aa17.02■□□□□ 0.32
NME3-209ENST00000566600 GVQW2A0A096LPI5 108 aaPredicted RBP17.01■□□□□ 0.31
NME3-209ENST00000566600 CNBPP62633 177 aaKnown RBP17.01■□□□□ 0.31
NME3-209ENST00000566600 TRGC2P03986 189 aa17■□□□□ 0.31
NME3-209ENST00000566600 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.99■□□□□ 0.31
NME3-209ENST00000566600 URB1-AS1Q96HZ7 61 aa16.99■□□□□ 0.31
NME3-209ENST00000566600 LRP1BQ9NZR2 4599 aa16.99■□□□□ 0.31
NME3-209ENST00000566600 APOMO95445 188 aa16.98■□□□□ 0.31
NME3-209ENST00000566600 HIGD2BQ4VC39 106 aa16.98■□□□□ 0.31
NME3-209ENST00000566600 LINC00173Q6ZV60 143 aa16.98■□□□□ 0.31
NME3-209ENST00000566600 UBE2D1P51668 147 aa16.97■□□□□ 0.31
NME3-209ENST00000566600 IGHV3OR16-9A0A0B4J2B5 98 aa16.96■□□□□ 0.31
NME3-209ENST00000566600 LINC00242Q5T6M2 205 aa16.96■□□□□ 0.31
NME3-209ENST00000566600 C5orf38Q86SI9 138 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms