RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 Q8N976 141 aa17.46■□□□□ 0.39
NME3-208ENST00000565379 TIMM21Q9BVV7 248 aa17.46■□□□□ 0.39
NME3-208ENST00000565379 KLK12Q9UKR0 248 aa17.46■□□□□ 0.39
NME3-208ENST00000565379 HSPG2P98160 4391 aa17.44■□□□□ 0.38
NME3-208ENST00000565379 LINC01549A6NIU2 74 aa17.44■□□□□ 0.38
NME3-208ENST00000565379 CRPP02741 224 aa17.43■□□□□ 0.38
NME3-208ENST00000565379 DGAT2L7PQ6IED9 249 aa17.43■□□□□ 0.38
NME3-208ENST00000565379 OR5A1Q8NGJ0 315 aa17.43■□□□□ 0.38
NME3-208ENST00000565379 SPANXA1Q9NS26 97 aa17.43■□□□□ 0.38
NME3-208ENST00000565379 RMI2Q96E14 147 aa17.42■□□□□ 0.38
NME3-208ENST00000565379 PRR34Q9NV39 138 aa17.42■□□□□ 0.38
NME3-208ENST00000565379 UBE2D4Q9Y2X8 147 aa17.42■□□□□ 0.38
NME3-208ENST00000565379 IGLV4-60A0A075B6I1 120 aa17.41■□□□□ 0.38
NME3-208ENST00000565379 LINC00614P0C842 121 aa17.41■□□□□ 0.38
NME3-208ENST00000565379 AP5S1Q9NUS5 200 aa17.41■□□□□ 0.38
NME3-208ENST00000565379 CYSLTR1Q9Y271 337 aa17.41■□□□□ 0.38
NME3-208ENST00000565379 LINC00269Q8N2A0 174 aa17.4■□□□□ 0.38
NME3-208ENST00000565379 UBE2WQ96B02 151 aa17.4■□□□□ 0.38
NME3-208ENST00000565379 COX11Q9Y6N1 276 aa17.4■□□□□ 0.38
NME3-208ENST00000565379 ABCA13Q86UQ4 5058 aa17.4■□□□□ 0.38
NME3-208ENST00000565379 MIAQ16674 131 aa17.39■□□□□ 0.37
NME3-208ENST00000565379 C2orf66Q6UXQ4 117 aa17.39■□□□□ 0.37
NME3-208ENST00000565379 TM2D2Q9BX73 214 aa17.39■□□□□ 0.37
NME3-208ENST00000565379 PYGO1Q9Y3Y4 419 aa17.39■□□□□ 0.37
NME3-208ENST00000565379 NPSP0C0P6 89 aa17.38■□□□□ 0.37
NME3-208ENST00000565379 RPL39P62891 51 aaKnown RBP17.38■□□□□ 0.37
NME3-208ENST00000565379 REG3AQ06141 175 aa17.38■□□□□ 0.37
NME3-208ENST00000565379 CDC42SE2Q9NRR3 84 aa17.38■□□□□ 0.37
NME3-208ENST00000565379 DNAH5Q8TE73 4624 aa17.38■□□□□ 0.37
NME3-208ENST00000565379 ENHOQ6UWT2 76 aa17.37■□□□□ 0.37
NME3-208ENST00000565379 ZNF664Q8N3J9 261 aa17.37■□□□□ 0.37
NME3-208ENST00000565379 CHCHD1Q96BP2 118 aaKnown RBP17.37■□□□□ 0.37
NME3-208ENST00000565379 APOBP04114 4563 aaKnown RBP17.36■□□□□ 0.37
NME3-208ENST00000565379 TRAV8-4A0A0B4J246 113 aa17.36■□□□□ 0.37
NME3-208ENST00000565379 MRPS36P82909 103 aaKnown RBP17.36■□□□□ 0.37
NME3-208ENST00000565379 Q9HAA7 133 aa17.36■□□□□ 0.37
NME3-208ENST00000565379 BAGE3Q86Y29 109 aa17.35■□□□□ 0.37
NME3-208ENST00000565379 TOMM6Q96B49 74 aa17.35■□□□□ 0.37
NME3-208ENST00000565379 URB1-AS1Q96HZ7 61 aa17.33■□□□□ 0.36
NME3-208ENST00000565379 C1orf43Q9BWL3 253 aa17.33■□□□□ 0.36
NME3-208ENST00000565379 Q6ZRN7 208 aaPredicted RBP17.32■□□□□ 0.36
NME3-208ENST00000565379 CCL25O15444 150 aa17.31■□□□□ 0.36
NME3-208ENST00000565379 PAPPA-AS1Q5QFB9 102 aa17.31■□□□□ 0.36
NME3-208ENST00000565379 TIMM17AQ99595 171 aa17.31■□□□□ 0.36
NME3-208ENST00000565379 PSCAO43653 123 aa17.3■□□□□ 0.36
NME3-208ENST00000565379 CLPSL2Q6UWE3 100 aa17.3■□□□□ 0.36
NME3-208ENST00000565379 KRTAP4-5Q9BYR2 181 aa17.3■□□□□ 0.36
NME3-208ENST00000565379 IGKV2D-24A0A075B6R9 120 aa17.29■□□□□ 0.36
NME3-208ENST00000565379 IGIPA6NJ69 53 aa17.29■□□□□ 0.36
NME3-208ENST00000565379 C16orf90A8MZG2 172 aa17.29■□□□□ 0.36
NME3-208ENST00000565379 Q6ZN92 141 aa17.29■□□□□ 0.36
NME3-208ENST00000565379 ERASQ7Z444 233 aa17.29■□□□□ 0.36
NME3-208ENST00000565379 TMEM141Q96I45 108 aa17.29■□□□□ 0.36
NME3-208ENST00000565379 C1orf196B1AJZ1 125 aa17.28■□□□□ 0.36
NME3-208ENST00000565379 HBDP02042 147 aa17.28■□□□□ 0.36
NME3-208ENST00000565379 Q6ZUT4 128 aa17.28■□□□□ 0.36
NME3-208ENST00000565379 SCGB3A1Q96QR1 104 aa17.28■□□□□ 0.36
NME3-208ENST00000565379 HIST1H2BKO60814 126 aa17.27■□□□□ 0.36
NME3-208ENST00000565379 HIST1H2BJP06899 126 aa17.27■□□□□ 0.36
NME3-208ENST00000565379 HIST1H2BOP23527 126 aa17.27■□□□□ 0.36
NME3-208ENST00000565379 HIST1H2BBP33778 126 aa17.27■□□□□ 0.36
NME3-208ENST00000565379 HIST1H2BDP58876 126 aa17.27■□□□□ 0.36
NME3-208ENST00000565379 HIST1H2BCP62807 126 aa17.27■□□□□ 0.36
NME3-208ENST00000565379 HIST2H2BEQ16778 126 aa17.27■□□□□ 0.36
NME3-208ENST00000565379 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.27■□□□□ 0.36
NME3-208ENST00000565379 HIST1H2BHQ93079 126 aa17.27■□□□□ 0.36
NME3-208ENST00000565379 HIST1H2BNQ99877 126 aa17.27■□□□□ 0.36
NME3-208ENST00000565379 HIST1H2BMQ99879 126 aa17.27■□□□□ 0.36
NME3-208ENST00000565379 IGLV4-3A0A075B6K6 122 aa17.26■□□□□ 0.35
NME3-208ENST00000565379 HSBP1O75506 76 aa17.26■□□□□ 0.35
NME3-208ENST00000565379 SS18Q15532 418 aa17.26■□□□□ 0.35
NME3-208ENST00000565379 IGKV3OR2-268A0A0C4DH90 116 aa17.25■□□□□ 0.35
NME3-208ENST00000565379 LINC00959A0A1B0GUT2 108 aa17.25■□□□□ 0.35
NME3-208ENST00000565379 CDK2AP2O75956 126 aa17.25■□□□□ 0.35
NME3-208ENST00000565379 KRTAP10-2P60368 255 aa17.25■□□□□ 0.35
NME3-208ENST00000565379 TEX43Q6ZNM6 134 aa17.24■□□□□ 0.35
NME3-208ENST00000565379 SPATA12Q7Z6I5 190 aa17.24■□□□□ 0.35
NME3-208ENST00000565379 FAM104AQ969W3 186 aa17.24■□□□□ 0.35
NME3-208ENST00000565379 VCX2Q9H322 139 aa17.24■□□□□ 0.35
NME3-208ENST00000565379 A0A096LNJ9 63 aa17.23■□□□□ 0.35
NME3-208ENST00000565379 C2orf88Q9BSF0 95 aa17.23■□□□□ 0.35
NME3-208ENST00000565379 SERF1AO75920 110 aa17.22■□□□□ 0.35
NME3-208ENST00000565379 OPRPNQ99935 248 aaPredicted RBP17.22■□□□□ 0.35
NME3-208ENST00000565379 IGLV10-54A0A075B6I4 117 aa17.21■□□□□ 0.35
NME3-208ENST00000565379 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.21■□□□□ 0.35
NME3-208ENST00000565379 RNASE13Q5GAN3 156 aaKnown RBP17.21■□□□□ 0.35
NME3-208ENST00000565379 CHCHD10Q8WYQ3 142 aaPredicted RBP17.21■□□□□ 0.35
NME3-208ENST00000565379 AMELXQ99217 191 aa17.21■□□□□ 0.35
NME3-208ENST00000565379 IFITM10A6NMD0 228 aa17.2■□□□□ 0.34
NME3-208ENST00000565379 ATP5LO75964 103 aa17.2■□□□□ 0.34
NME3-208ENST00000565379 FUSP35637 526 aaKnown RBP eCLIP17.2■□□□□ 0.34
NME3-208ENST00000565379 PDZD11Q5EBL8 140 aa17.2■□□□□ 0.34
NME3-208ENST00000565379 TRAV13-1A0A0B4J241 112 aa17.19■□□□□ 0.34
NME3-208ENST00000565379 EREGO14944 169 aa17.19■□□□□ 0.34
NME3-208ENST00000565379 PMCHL1Q16048 86 aa17.19■□□□□ 0.34
NME3-208ENST00000565379 KRTAP26-1Q6PEX3 210 aa17.19■□□□□ 0.34
NME3-208ENST00000565379 LINC00310P59036 64 aa17.17■□□□□ 0.34
NME3-208ENST00000565379 CD164L2Q6UWJ8 174 aa17.17■□□□□ 0.34
NME3-208ENST00000565379 MAPKAPK5-AS1Q8N8E1 139 aa17.16■□□□□ 0.34
NME3-208ENST00000565379 GAGE12HA6NDE8 117 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms