RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 OR5A1Q8NGJ0 315 aa7.75□□□□□ -1.17
GTF3C1-204ENST00000564664 TSKUQ8WUA8 353 aa7.75□□□□□ -1.17
GTF3C1-204ENST00000564664 EIF5A2Q9GZV4 153 aaKnown RBP7.75□□□□□ -1.17
GTF3C1-204ENST00000564664 TMEM191AQ9H0A3 160 aa7.75□□□□□ -1.17
GTF3C1-204ENST00000564664 ST20Q9HBF5 79 aa7.75□□□□□ -1.17
GTF3C1-204ENST00000564664 OSTCQ9NRP0 149 aa7.75□□□□□ -1.17
GTF3C1-204ENST00000564664 TMA7Q9Y2S6 64 aaKnown RBP7.75□□□□□ -1.17
GTF3C1-204ENST00000564664 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 GVQW2A0A096LPI5 108 aaPredicted RBP7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 IGKV3OR2-268A0A0C4DH90 116 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 C9JQL5 133 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 PPP1R17O96001 155 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 ESDP10768 282 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 PNRC1Q12796 327 aaPredicted RBP7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 FAM74A3Q4VXF1 159 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 LINC01551Q86U37 167 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 MRAP2Q96G30 205 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 SMIM7Q9BQ49 75 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 TMEM242Q9NWH2 141 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 LINC00474Q9P2X8 69 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 FAT3Q8TDW7 4589 aa7.74□□□□□ -1.17
GTF3C1-204ENST00000564664 TRBV27A0A0K0K1C4 114 aa7.73□□□□□ -1.17
GTF3C1-204ENST00000564664 ZNF727A8MUV8 499 aa7.73□□□□□ -1.17
GTF3C1-204ENST00000564664 HIGD1CA8MV81 97 aa7.73□□□□□ -1.17
GTF3C1-204ENST00000564664 SRP19P09132 144 aaKnown RBP7.73□□□□□ -1.17
GTF3C1-204ENST00000564664 CEBPGP53567 150 aa7.73□□□□□ -1.17
GTF3C1-204ENST00000564664 POLR2KP53803 58 aaKnown RBP7.73□□□□□ -1.17
GTF3C1-204ENST00000564664 SMAGPQ0VAQ4 97 aa7.73□□□□□ -1.17
GTF3C1-204ENST00000564664 FOXI1Q12951 378 aa7.73□□□□□ -1.17
GTF3C1-204ENST00000564664 MRPL52Q86TS9 123 aaKnown RBP7.73□□□□□ -1.17
GTF3C1-204ENST00000564664 C7orf33Q8WU49 177 aa7.73□□□□□ -1.17
GTF3C1-204ENST00000564664 IGHV1-58A0A0C4DH39 117 aa7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 LINC00959A0A1B0GUT2 108 aa7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 COLCA2A8K830 154 aa7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 VCYO14598 125 aa7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 CCL25O15444 150 aa7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 MT-ND4LP03901 98 aa7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 RAB4AP20338 218 aa7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 HNRNPA3P51991 378 aaKnown RBP7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 COX6A2Q02221 97 aa7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 RIGQ13278 110 aa7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 SS18Q15532 418 aa7.72□□□□□ -1.17
GTF3C1-204ENST00000564664 C7orf77A4D0Y5 90 aa7.71□□□□□ -1.18
GTF3C1-204ENST00000564664 TSHBP01222 138 aa7.71□□□□□ -1.18
GTF3C1-204ENST00000564664 CHTF8P0CG12 524 aa7.71□□□□□ -1.18
GTF3C1-204ENST00000564664 HIGD2BQ4VC39 106 aa7.71□□□□□ -1.18
GTF3C1-204ENST00000564664 CDC42SE2Q9NRR3 84 aa7.71□□□□□ -1.18
GTF3C1-204ENST00000564664 CSDC2Q9Y534 153 aaKnown RBP7.71□□□□□ -1.18
GTF3C1-204ENST00000564664 PKHD1L1Q86WI1 4243 aa7.71□□□□□ -1.18
GTF3C1-204ENST00000564664 HMCN2Q8NDA2 5059 aa7.7□□□□□ -1.18
GTF3C1-204ENST00000564664 MAJINQ3KP22 176 aa7.7□□□□□ -1.18
GTF3C1-204ENST00000564664 CD164L2Q6UWJ8 174 aa7.7□□□□□ -1.18
GTF3C1-204ENST00000564664 ZNF664Q8N3J9 261 aa7.7□□□□□ -1.18
GTF3C1-204ENST00000564664 PRSS3P2Q8NHM4 247 aa7.7□□□□□ -1.18
GTF3C1-204ENST00000564664 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
GTF3C1-204ENST00000564664 C1orf196B1AJZ1 125 aa7.69□□□□□ -1.18
GTF3C1-204ENST00000564664 XCL1P47992 114 aa7.69□□□□□ -1.18
GTF3C1-204ENST00000564664 TMEM241Q24JQ0 296 aa7.69□□□□□ -1.18
GTF3C1-204ENST00000564664 PPP1R2P9O14990 202 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 GAS8-AS1O95177 125 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 FCER1GP30273 86 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 AMN1Q8IY45 258 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 STPG4Q8N801 248 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 NUP35Q8NFH5 326 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 ISOC2Q96AB3 205 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 YPEL4Q96NS1 127 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 KIR2DL4Q99706 377 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 CTDSP1Q9GZU7 261 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 RPS10P5Q9NQ39 176 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 NAT8BQ9UHF3 227 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 V9GYV3 84 aa7.68□□□□□ -1.18
GTF3C1-204ENST00000564664 IGKV2-24A0A0C4DH68 120 aa7.67□□□□□ -1.18
GTF3C1-204ENST00000564664 A0A1B0GW15 77 aa7.67□□□□□ -1.18
GTF3C1-204ENST00000564664 ZNF561-AS1K7EIQ3 104 aa7.67□□□□□ -1.18
GTF3C1-204ENST00000564664 PHOX2AO14813 284 aa7.67□□□□□ -1.18
GTF3C1-204ENST00000564664 TCAPO15273 167 aa7.67□□□□□ -1.18
GTF3C1-204ENST00000564664 CBLN2Q8IUK8 224 aa7.67□□□□□ -1.18
GTF3C1-204ENST00000564664 TMEM18Q96B42 140 aa7.67□□□□□ -1.18
GTF3C1-204ENST00000564664 MT1HL1P0DM35 61 aa7.66□□□□□ -1.18
GTF3C1-204ENST00000564664 RAB5BP61020 215 aa7.66□□□□□ -1.18
GTF3C1-204ENST00000564664 SUMO2P61956 95 aaKnown RBP7.66□□□□□ -1.18
GTF3C1-204ENST00000564664 SYCNQ0VAF6 134 aa7.66□□□□□ -1.18
GTF3C1-204ENST00000564664 CARD19Q96LW7 228 aa7.66□□□□□ -1.18
GTF3C1-204ENST00000564664 C20orf78Q9BR46 151 aa7.66□□□□□ -1.18
GTF3C1-204ENST00000564664 TIMM21Q9BVV7 248 aa7.66□□□□□ -1.18
GTF3C1-204ENST00000564664 TRBV24-1A0A075B6N3 115 aa7.65□□□□□ -1.18
GTF3C1-204ENST00000564664 RPL32P62910 135 aaKnown RBP7.65□□□□□ -1.18
GTF3C1-204ENST00000564664 FAM104BQ5XKR9 115 aa7.65□□□□□ -1.18
GTF3C1-204ENST00000564664 NRACQ8N912 160 aa7.65□□□□□ -1.18
GTF3C1-204ENST00000564664 NAT8Q9UHE5 227 aa7.65□□□□□ -1.18
GTF3C1-204ENST00000564664 A0A096LNI7 61 aa7.64□□□□□ -1.19
GTF3C1-204ENST00000564664 SMIM27A0A1W2PRY6 76 aa7.64□□□□□ -1.19
GTF3C1-204ENST00000564664 COX7A2LO14548 114 aa7.64□□□□□ -1.19
GTF3C1-204ENST00000564664 S100A8P05109 93 aa7.64□□□□□ -1.19
GTF3C1-204ENST00000564664 RAB5AP20339 215 aa7.64□□□□□ -1.19
GTF3C1-204ENST00000564664 MALP21145 153 aa7.64□□□□□ -1.19
GTF3C1-204ENST00000564664 RPL23P62829 140 aaKnown RBP7.64□□□□□ -1.19
GTF3C1-204ENST00000564664 UBE2D4Q9Y2X8 147 aa7.64□□□□□ -1.19
GTF3C1-204ENST00000564664 APOMO95445 188 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms