RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 VAMP3Q15836 100 aa12.64□□□□□ -0.39
COMMD4-208ENST00000563220 HIGD1BQ9P298 99 aa12.64□□□□□ -0.39
COMMD4-208ENST00000563220 CHTOPQ9Y3Y2 248 aaKnown RBP12.64□□□□□ -0.39
COMMD4-208ENST00000563220 PYGO1Q9Y3Y4 419 aa12.64□□□□□ -0.39
COMMD4-208ENST00000563220 IGLV4-3A0A075B6K6 122 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 C12orf74Q32Q52 190 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 VSIG2Q96IQ7 327 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 CST9LQ9H4G1 147 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 UBE2D4Q9Y2X8 147 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 A6NDN8 102 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 F8VRH5 84 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 PAX4O43316 350 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 NMUP48645 174 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 PMVKQ15126 192 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 GTSF1LQ9H1H1 148 aa12.63□□□□□ -0.39
COMMD4-208ENST00000563220 A0A0J9YY99 117 aa12.62□□□□□ -0.39
COMMD4-208ENST00000563220 MRAPQ8TCY5 172 aa12.62□□□□□ -0.39
COMMD4-208ENST00000563220 C11orf68Q9H3H3 251 aaKnown RBP12.62□□□□□ -0.39
COMMD4-208ENST00000563220 TEX48A0A1B0GUV7 120 aa12.61□□□□□ -0.39
COMMD4-208ENST00000563220 F5H768 121 aa12.61□□□□□ -0.39
COMMD4-208ENST00000563220 K7EP13 123 aa12.61□□□□□ -0.39
COMMD4-208ENST00000563220 H3BRM9 83 aa12.61□□□□□ -0.39
COMMD4-208ENST00000563220 HTN3P15516 51 aa12.61□□□□□ -0.39
COMMD4-208ENST00000563220 PLNP26678 52 aa12.61□□□□□ -0.39
COMMD4-208ENST00000563220 A0A0J9YWU9 116 aa12.6□□□□□ -0.39
COMMD4-208ENST00000563220 TM2D3Q9BRN9 247 aa12.6□□□□□ -0.39
COMMD4-208ENST00000563220 SPANXA1Q9NS26 97 aa12.6□□□□□ -0.39
COMMD4-208ENST00000563220 TRAV26-1A0A087WT03 109 aa12.59□□□□□ -0.39
COMMD4-208ENST00000563220 ATP6V0E2Q8NHE4 81 aa12.59□□□□□ -0.39
COMMD4-208ENST00000563220 TENM3Q9P273 2699 aa12.59□□□□□ -0.39
COMMD4-208ENST00000563220 IGLV4-69A0A075B6H9 119 aa12.59□□□□□ -0.39
COMMD4-208ENST00000563220 IGKV2D-26A0A0A0MRZ7 120 aa12.59□□□□□ -0.39
COMMD4-208ENST00000563220 TCTAP57738 103 aa12.59□□□□□ -0.39
COMMD4-208ENST00000563220 AMELXQ99217 191 aa12.59□□□□□ -0.39
COMMD4-208ENST00000563220 SPATA25Q9BR10 227 aa12.59□□□□□ -0.39
COMMD4-208ENST00000563220 VCX2Q9H322 139 aa12.59□□□□□ -0.39
COMMD4-208ENST00000563220 RNASE13Q5GAN3 156 aaKnown RBP12.58□□□□□ -0.4
COMMD4-208ENST00000563220 A0A096LPF7 62 aa12.57□□□□□ -0.4
COMMD4-208ENST00000563220 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
COMMD4-208ENST00000563220 TMEM243Q9BU79 118 aa12.57□□□□□ -0.4
COMMD4-208ENST00000563220 TIMM21Q9BVV7 248 aa12.57□□□□□ -0.4
COMMD4-208ENST00000563220 TRBV25-1A0A075B6N4 114 aa12.57□□□□□ -0.4
COMMD4-208ENST00000563220 C9orf118A6NHY6 69 aa12.57□□□□□ -0.4
COMMD4-208ENST00000563220 AMMECR1LQ6DCA0 310 aa12.57□□□□□ -0.4
COMMD4-208ENST00000563220 Q6ZUT4 128 aa12.57□□□□□ -0.4
COMMD4-208ENST00000563220 TRAV8-6A0A0B4J262 113 aa12.56□□□□□ -0.4
COMMD4-208ENST00000563220 PAPPA-AS1Q5QFB9 102 aa12.56□□□□□ -0.4
COMMD4-208ENST00000563220 C11orf86A6NJI1 115 aa12.55□□□□□ -0.4
COMMD4-208ENST00000563220 Q6ZTC4 211 aa12.55□□□□□ -0.4
COMMD4-208ENST00000563220 MRPS36P82909 103 aaKnown RBP12.55□□□□□ -0.4
COMMD4-208ENST00000563220 HUWE1Q7Z6Z7 4374 aaKnown RBP12.54□□□□□ -0.4
COMMD4-208ENST00000563220 DGAT2L7PQ6IED9 249 aa12.54□□□□□ -0.4
COMMD4-208ENST00000563220 CSDC2Q9Y534 153 aaKnown RBP12.54□□□□□ -0.4
COMMD4-208ENST00000563220 NANOS2P60321 138 aaKnown RBP12.53□□□□□ -0.4
COMMD4-208ENST00000563220 CHAC1Q9BUX1 264 aa12.53□□□□□ -0.4
COMMD4-208ENST00000563220 A0A0J9YXV3 536 aa12.53□□□□□ -0.4
COMMD4-208ENST00000563220 UBE2L6O14933 153 aa12.53□□□□□ -0.4
COMMD4-208ENST00000563220 GAGE6Q13070 117 aa12.53□□□□□ -0.4
COMMD4-208ENST00000563220 H7C423 109 aa12.52□□□□□ -0.41
COMMD4-208ENST00000563220 TAL2Q16559 108 aa12.52□□□□□ -0.41
COMMD4-208ENST00000563220 C11orf45Q8TAV5 145 aa12.52□□□□□ -0.41
COMMD4-208ENST00000563220 DNHD1Q96M86 4753 aa12.51□□□□□ -0.41
COMMD4-208ENST00000563220 NFE4Q86UQ8 179 aa12.51□□□□□ -0.41
COMMD4-208ENST00000563220 CHCHD5Q9BSY4 110 aa12.51□□□□□ -0.41
COMMD4-208ENST00000563220 TM2D2Q9BX73 214 aa12.51□□□□□ -0.41
COMMD4-208ENST00000563220 CDC42SE2Q9NRR3 84 aa12.51□□□□□ -0.41
COMMD4-208ENST00000563220 MRPL23Q16540 153 aaKnown RBP12.51□□□□□ -0.41
COMMD4-208ENST00000563220 GTF2H5Q6ZYL4 71 aa12.5□□□□□ -0.41
COMMD4-208ENST00000563220 OR5A1Q8NGJ0 315 aa12.5□□□□□ -0.41
COMMD4-208ENST00000563220 TTTY13Q9BZ97 58 aa12.5□□□□□ -0.41
COMMD4-208ENST00000563220 CBY1Q9Y3M2 126 aa12.5□□□□□ -0.41
COMMD4-208ENST00000563220 ICOSQ9Y6W8 199 aa12.49□□□□□ -0.41
COMMD4-208ENST00000563220 SMIM13P0DJ93 91 aa12.48□□□□□ -0.41
COMMD4-208ENST00000563220 SMAGPQ0VAQ4 97 aa12.48□□□□□ -0.41
COMMD4-208ENST00000563220 GAGE10A6NGK3 116 aa12.48□□□□□ -0.41
COMMD4-208ENST00000563220 UBE2D1P51668 147 aa12.48□□□□□ -0.41
COMMD4-208ENST00000563220 TMEM170BQ5T4T1 132 aa12.48□□□□□ -0.41
COMMD4-208ENST00000563220 CEND1Q8N111 149 aa12.48□□□□□ -0.41
COMMD4-208ENST00000563220 MAPKAPK5-AS1Q8N8E1 139 aa12.48□□□□□ -0.41
COMMD4-208ENST00000563220 TMEM101Q96IK0 257 aa12.48□□□□□ -0.41
COMMD4-208ENST00000563220 IGLV4-60A0A075B6I1 120 aa12.47□□□□□ -0.41
COMMD4-208ENST00000563220 ZNF22P17026 224 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-208ENST00000563220 GCSHP23434 173 aa12.47□□□□□ -0.41
COMMD4-208ENST00000563220 FXYD2P54710 66 aa12.47□□□□□ -0.41
COMMD4-208ENST00000563220 H3BUT2 72 aa12.46□□□□□ -0.41
COMMD4-208ENST00000563220 K7EP34 96 aa12.46□□□□□ -0.41
COMMD4-208ENST00000563220 E9PLD3 99 aa12.46□□□□□ -0.42
COMMD4-208ENST00000563220 DEFB131BA0A096LNP1 70 aa12.45□□□□□ -0.42
COMMD4-208ENST00000563220 TINCRA0A1B0GVN0 87 aa12.45□□□□□ -0.42
COMMD4-208ENST00000563220 A0A1W2PPM0 123 aa12.45□□□□□ -0.42
COMMD4-208ENST00000563220 H3BNG1 76 aa12.45□□□□□ -0.42
COMMD4-208ENST00000563220 SH2D6Q7Z4S9 175 aa12.45□□□□□ -0.42
COMMD4-208ENST00000563220 DNAH9Q9NYC9 4486 aa12.45□□□□□ -0.42
COMMD4-208ENST00000563220 MYMXA0A1B0GTQ4 84 aa12.44□□□□□ -0.42
COMMD4-208ENST00000563220 TMEM262E9PQX1 116 aa12.44□□□□□ -0.42
COMMD4-208ENST00000563220 RBX1P62877 108 aa12.44□□□□□ -0.42
COMMD4-208ENST00000563220 KRTAP21-3Q3LHN1 58 aa12.44□□□□□ -0.42
COMMD4-208ENST00000563220 TRAV13-1A0A0B4J241 112 aa12.43□□□□□ -0.42
COMMD4-208ENST00000563220 TMEM223A0PJW6 202 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms