RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 UNC80Q8N2C7 3258 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 LAMA2P24043 3122 aaKnown RBP0.59□□□□□ -2.31
LINC00557-201ENST00000563184 POLR1AO95602 1720 aaPredicted RBP0.59□□□□□ -2.31
LINC00557-201ENST00000563184 RGPD1P0DJD0 1748 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 ARHGEF5Q12774 1597 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 TRBV7-1A0A0A6YYK4 115 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 TRBV10-3A0A0K0K1G6 114 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 NBDYA0A0U1RRE5 68 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 H3BQ15 152 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 M0R129 80 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 SSSCA1O60232 199 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 SIX6O95475 246 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 PPP3R1P63098 170 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 MRPL54Q6P161 138 aaKnown RBP0.59□□□□□ -2.31
LINC00557-201ENST00000563184 DEFB123Q8N688 67 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 LINC00208Q96KT6 92 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 CYP4F30PQ9H0H9 118 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 TMEM14BQ9NUH8 114 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 SCP2D1Q9UJQ7 156 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 MYO18BQ8IUG5 2567 aa0.59□□□□□ -2.32
LINC00557-201ENST00000563184 RGPD3A6NKT7 1758 aaPredicted RBP0.59□□□□□ -2.32
LINC00557-201ENST00000563184 RGPD4Q7Z3J3 1758 aa0.59□□□□□ -2.32
LINC00557-201ENST00000563184 ABCA4P78363 2273 aa0.59□□□□□ -2.32
LINC00557-201ENST00000563184 USP32Q8NFA0 1604 aa0.59□□□□□ -2.32
LINC00557-201ENST00000563184 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.32
LINC00557-201ENST00000563184 ANKRD17O75179 2603 aaKnown RBP0.59□□□□□ -2.32
LINC00557-201ENST00000563184 RIF1Q5UIP0 2472 aaKnown RBP0.59□□□□□ -2.32
LINC00557-201ENST00000563184 LAMA3Q16787 3333 aa0.59□□□□□ -2.32
LINC00557-201ENST00000563184 NCOR2Q9Y618 2525 aa0.59□□□□□ -2.32
LINC00557-201ENST00000563184 DUOX2Q9NRD8 1548 aa0.59□□□□□ -2.32
LINC00557-201ENST00000563184 CACNA1HO95180 2353 aa0.59□□□□□ -2.32
LINC00557-201ENST00000563184 NAV3Q8IVL0 2385 aa0.59□□□□□ -2.32
LINC00557-201ENST00000563184 ZFHX4Q86UP3 3567 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 BRCA2P51587 3418 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 ANKRD36BQ8N2N9 1353 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 MKI67P46013 3256 aaKnown RBP0.58□□□□□ -2.32
LINC00557-201ENST00000563184 NWD2Q9ULI1 1742 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 NRKQ7Z2Y5 1582 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 MYH13Q9UKX3 1938 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 INO80Q9ULG1 1556 aaPredicted RBP0.58□□□□□ -2.32
LINC00557-201ENST00000563184 CASZ1Q86V15 1759 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 PPIP5K1Q6PFW1 1433 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 LOC100130705A0A1B0GUX0 176 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 FAM24AA6NFZ4 105 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 SNAPC5O75971 98 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 SMIM6P0DI80 62 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 CCL3L1P16619 93 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 SPINT3P49223 89 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 ELOF1P60002 83 aaKnown RBP0.58□□□□□ -2.32
LINC00557-201ENST00000563184 DCDP81605 110 aaKnown RBP0.58□□□□□ -2.32
LINC00557-201ENST00000563184 GTF2H5Q6ZYL4 71 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 C5orf38Q86SI9 138 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 SVBPQ8N300 66 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 COX7B2Q8TF08 81 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 AQP10Q96PS8 301 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 DSCR8Q96T75 97 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 ABCA12Q86UK0 2595 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 RREB1Q92766 1687 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
LINC00557-201ENST00000563184 GVINP1Q7Z2Y8 2422 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 CEP295Q9C0D2 2601 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 KCPQ6ZWJ8 1503 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 UBR1Q8IWV7 1749 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.58□□□□□ -2.32
LINC00557-201ENST00000563184 MYO9AB2RTY4 2548 aa0.58□□□□□ -2.32
LINC00557-201ENST00000563184 EYSQ5T1H1 3165 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 USP24Q9UPU5 2620 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 KIAA1549LQ6ZVL6 1849 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 EIF2AK4Q9P2K8 1649 aaKnown RBP0.57□□□□□ -2.32
LINC00557-201ENST00000563184 SPTAN1Q13813 2472 aaKnown RBP0.57□□□□□ -2.32
LINC00557-201ENST00000563184 CLTCQ00610 1675 aaKnown RBP0.57□□□□□ -2.32
LINC00557-201ENST00000563184 KIF1AQ12756 1690 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 ITSN2Q9NZM3 1697 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 ZFYVE26Q68DK2 2539 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 A0A096LNT2 108 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 TRAV13-2A0A0B4J235 113 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 IFITM1P13164 125 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 NPC2P61916 151 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 CATR1Q13166 79 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 C20orf197Q8N268 126 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 ACBD7Q8N6N7 88 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 Q8N8P6 123 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 PLAC4Q8WY50 150 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 V9GYV3 84 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 UBR5O95071 2799 aaPredicted RBP0.57□□□□□ -2.32
LINC00557-201ENST00000563184 TEX15Q9BXT5 2789 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 NRAPQ86VF7 1730 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 ABCC6O95255 1503 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 ABCA2Q9BZC7 2435 aa0.57□□□□□ -2.32
LINC00557-201ENST00000563184 COL14A1Q05707 1796 aaKnown RBP0.57□□□□□ -2.32
LINC00557-201ENST00000563184 PIK3C2BO00750 1634 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 APCP25054 2843 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 CFAP54Q96N23 3096 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 ZNF609O15014 1411 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 ANKRD50Q9ULJ7 1429 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 MYOM1P52179 1685 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 LMO7Q8WWI1 1683 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 CTTNBP2Q8WZ74 1663 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 CFAP47Q6ZTR5 3102 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms