RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 ZC2HC1BQ5TFG8 222 aa9.72□□□□□ -0.85
SPG7-206ENST00000562775 AMMECR1LQ6DCA0 310 aa9.72□□□□□ -0.85
SPG7-206ENST00000562775 AMELXQ99217 191 aa9.72□□□□□ -0.85
SPG7-206ENST00000562775 DNAH9Q9NYC9 4486 aa9.72□□□□□ -0.85
SPG7-206ENST00000562775 IGKCP01834 107 aa9.71□□□□□ -0.85
SPG7-206ENST00000562775 ZNF25P17030 456 aaPredicted RBP9.71□□□□□ -0.85
SPG7-206ENST00000562775 GAGE6Q13070 117 aa9.71□□□□□ -0.85
SPG7-206ENST00000562775 TIRAPP58753 221 aa9.71□□□□□ -0.86
SPG7-206ENST00000562775 Q6ZUT4 128 aa9.71□□□□□ -0.86
SPG7-206ENST00000562775 OR5A1Q8NGJ0 315 aa9.71□□□□□ -0.86
SPG7-206ENST00000562775 TMEM101Q96IK0 257 aa9.71□□□□□ -0.86
SPG7-206ENST00000562775 PLNP26678 52 aa9.7□□□□□ -0.86
SPG7-206ENST00000562775 LELP1Q5T871 98 aa9.7□□□□□ -0.86
SPG7-206ENST00000562775 LYPD5Q6UWN5 251 aa9.7□□□□□ -0.86
SPG7-206ENST00000562775 ZNF664Q8N3J9 261 aa9.7□□□□□ -0.86
SPG7-206ENST00000562775 CDC42SE2Q9NRR3 84 aa9.7□□□□□ -0.86
SPG7-206ENST00000562775 PAM16Q9Y3D7 125 aa9.7□□□□□ -0.86
SPG7-206ENST00000562775 HSBP1L1C9JCN9 74 aa9.69□□□□□ -0.86
SPG7-206ENST00000562775 MAJINQ3KP22 176 aa9.69□□□□□ -0.86
SPG7-206ENST00000562775 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
SPG7-206ENST00000562775 hDV102S1A0JD36 115 aa9.68□□□□□ -0.86
SPG7-206ENST00000562775 SPATA45Q537H7 98 aa9.68□□□□□ -0.86
SPG7-206ENST00000562775 RNASE13Q5GAN3 156 aaKnown RBP9.68□□□□□ -0.86
SPG7-206ENST00000562775 C15orf53Q8NAA6 179 aa9.68□□□□□ -0.86
SPG7-206ENST00000562775 C2orf88Q9BSF0 95 aa9.68□□□□□ -0.86
SPG7-206ENST00000562775 A0A1B0GUV1 79 aa9.67□□□□□ -0.86
SPG7-206ENST00000562775 TMEM262E9PQX1 116 aa9.67□□□□□ -0.86
SPG7-206ENST00000562775 PKIAP61925 76 aa9.67□□□□□ -0.86
SPG7-206ENST00000562775 NFE4Q86UQ8 179 aa9.67□□□□□ -0.86
SPG7-206ENST00000562775 IGLV4-60A0A075B6I1 120 aa9.66□□□□□ -0.86
SPG7-206ENST00000562775 IGLC3P0DOY3 106 aa9.66□□□□□ -0.86
SPG7-206ENST00000562775 RBX1P62877 108 aa9.66□□□□□ -0.86
SPG7-206ENST00000562775 STAB2Q8WWQ8 2551 aa9.65□□□□□ -0.86
SPG7-206ENST00000562775 TRAV8-6A0A0B4J262 113 aa9.65□□□□□ -0.86
SPG7-206ENST00000562775 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
SPG7-206ENST00000562775 C11orf86A6NJI1 115 aa9.65□□□□□ -0.86
SPG7-206ENST00000562775 UBE2D1P51668 147 aa9.65□□□□□ -0.86
SPG7-206ENST00000562775 MPV17L2Q567V2 206 aa9.65□□□□□ -0.86
SPG7-206ENST00000562775 STPG4Q8N801 248 aa9.65□□□□□ -0.86
SPG7-206ENST00000562775 PRO1933Q9H354 126 aa9.65□□□□□ -0.86
SPG7-206ENST00000562775 MEGF8Q7Z7M0 2845 aa9.65□□□□□ -0.86
SPG7-206ENST00000562775 TSTD3H0UI37 97 aa9.64□□□□□ -0.87
SPG7-206ENST00000562775 ESRGQ1W209 222 aa9.64□□□□□ -0.87
SPG7-206ENST00000562775 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
SPG7-206ENST00000562775 TINCRA0A1B0GVN0 87 aa9.63□□□□□ -0.87
SPG7-206ENST00000562775 IGLL5B9A064 214 aa9.63□□□□□ -0.87
SPG7-206ENST00000562775 COL7A1Q02388 2944 aa9.63□□□□□ -0.87
SPG7-206ENST00000562775 ANKRD39Q53RE8 183 aa9.63□□□□□ -0.87
SPG7-206ENST00000562775 FAM19A3Q7Z5A8 133 aa9.63□□□□□ -0.87
SPG7-206ENST00000562775 SEC11AP67812 179 aa9.62□□□□□ -0.87
SPG7-206ENST00000562775 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
SPG7-206ENST00000562775 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
SPG7-206ENST00000562775 ZNF22P17026 224 aaPredicted RBP9.61□□□□□ -0.87
SPG7-206ENST00000562775 LINC00242Q5T6M2 205 aa9.61□□□□□ -0.87
SPG7-206ENST00000562775 HERVK_113P63121 156 aa9.6□□□□□ -0.87
SPG7-206ENST00000562775 GEMIN7Q9H840 131 aaKnown RBP9.6□□□□□ -0.87
SPG7-206ENST00000562775 PCP4L1A6NKN8 68 aa9.59□□□□□ -0.87
SPG7-206ENST00000562775 HERVK_113P61574 105 aa9.59□□□□□ -0.87
SPG7-206ENST00000562775 WFDC10BQ8IUB3 73 aa9.59□□□□□ -0.87
SPG7-206ENST00000562775 Q8N3U1 123 aa9.59□□□□□ -0.87
SPG7-206ENST00000562775 C14orf144Q96I85 54 aa9.59□□□□□ -0.87
SPG7-206ENST00000562775 IGLV5-45A0A087WSX0 123 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 IGKV3OR2-268A0A0C4DH90 116 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 E9PLD3 99 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 ANGP03950 147 aaKnown RBP9.58□□□□□ -0.88
SPG7-206ENST00000562775 TCTAP57738 103 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 IGKV2D-26A0A0A0MRZ7 120 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 LINC00959A0A1B0GUT2 108 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 TMEM223A0PJW6 202 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 COX8AP10176 69 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 NMUP48645 174 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 CCL18P55774 89 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 LINC00269Q8N2A0 174 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 LINC00469Q8N7U9 141 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 MIEN1Q9BRT3 115 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 UQCR10Q9UDW1 63 aa9.58□□□□□ -0.88
SPG7-206ENST00000562775 PRKDCP78527 4128 aaKnown RBP9.57□□□□□ -0.88
SPG7-206ENST00000562775 NUPR2A6NF83 97 aa9.57□□□□□ -0.88
SPG7-206ENST00000562775 CCL25O15444 150 aa9.57□□□□□ -0.88
SPG7-206ENST00000562775 COX6A2Q02221 97 aa9.57□□□□□ -0.88
SPG7-206ENST00000562775 CDKN2A-AS1Q9UH64 79 aa9.57□□□□□ -0.88
SPG7-206ENST00000562775 MRPS16Q9Y3D3 137 aaKnown RBP9.57□□□□□ -0.88
SPG7-206ENST00000562775 H3BRM9 83 aa9.56□□□□□ -0.88
SPG7-206ENST00000562775 REG3AQ06141 175 aa9.56□□□□□ -0.88
SPG7-206ENST00000562775 SS18Q15532 418 aa9.56□□□□□ -0.88
SPG7-206ENST00000562775 SLC25A34Q6PIV7 304 aa9.56□□□□□ -0.88
SPG7-206ENST00000562775 APLNQ9ULZ1 77 aa9.56□□□□□ -0.88
SPG7-206ENST00000562775 KLK5Q9Y337 293 aaPredicted RBP9.56□□□□□ -0.88
SPG7-206ENST00000562775 LINC00588Q9Y4M8 146 aa9.56□□□□□ -0.88
SPG7-206ENST00000562775 IGHV3-30P01768 117 aa9.55□□□□□ -0.88
SPG7-206ENST00000562775 IGHV3-33P01772 117 aa9.55□□□□□ -0.88
SPG7-206ENST00000562775 IGHV3-30-3P0DP02 117 aa9.55□□□□□ -0.88
SPG7-206ENST00000562775 IGHV3-30-5P0DP03 117 aa9.55□□□□□ -0.88
SPG7-206ENST00000562775 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
SPG7-206ENST00000562775 DDTP30046 118 aa9.54□□□□□ -0.88
SPG7-206ENST00000562775 LINC01556Q5JQF7 62 aa9.54□□□□□ -0.88
SPG7-206ENST00000562775 CLPSL2Q6UWE3 100 aa9.54□□□□□ -0.88
SPG7-206ENST00000562775 PCP2Q8IVA1 136 aa9.54□□□□□ -0.88
SPG7-206ENST00000562775 BOD1L2Q8IYS8 172 aa9.54□□□□□ -0.88
SPG7-206ENST00000562775 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms