RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 FAM30AQ9NZY2 134 aa10.52□□□□□ -0.73
COMMD4-206ENST00000562610 PCLOQ9Y6V0 5065 aa10.51□□□□□ -0.73
COMMD4-206ENST00000562610 hDV102S1A0JD36 115 aa10.51□□□□□ -0.73
COMMD4-206ENST00000562610 MRPL52Q86TS9 123 aaKnown RBP10.51□□□□□ -0.73
COMMD4-206ENST00000562610 SEC11CQ9BY50 192 aa10.51□□□□□ -0.73
COMMD4-206ENST00000562610 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
COMMD4-206ENST00000562610 SMR3BP02814 79 aaPredicted RBP10.5□□□□□ -0.73
COMMD4-206ENST00000562610 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
COMMD4-206ENST00000562610 SMAGPQ0VAQ4 97 aa10.5□□□□□ -0.73
COMMD4-206ENST00000562610 TMEM18Q96B42 140 aa10.5□□□□□ -0.73
COMMD4-206ENST00000562610 PRELID3AQ96N28 172 aa10.5□□□□□ -0.73
COMMD4-206ENST00000562610 EPM2AB3EWF7 344 aa10.49□□□□□ -0.73
COMMD4-206ENST00000562610 PHOX2AO14813 284 aa10.49□□□□□ -0.73
COMMD4-206ENST00000562610 TCAPO15273 167 aa10.49□□□□□ -0.73
COMMD4-206ENST00000562610 TMEM136Q6ZRR5 245 aa10.49□□□□□ -0.73
COMMD4-206ENST00000562610 Q6ZSA8 131 aa10.49□□□□□ -0.73
COMMD4-206ENST00000562610 ZNF664Q8N3J9 261 aa10.49□□□□□ -0.73
COMMD4-206ENST00000562610 CLRN3Q8NCR9 226 aa10.49□□□□□ -0.73
COMMD4-206ENST00000562610 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
COMMD4-206ENST00000562610 UBE2D4Q9Y2X8 147 aa10.49□□□□□ -0.73
COMMD4-206ENST00000562610 ABCA13Q86UQ4 5058 aa10.48□□□□□ -0.73
COMMD4-206ENST00000562610 XCL1P47992 114 aa10.48□□□□□ -0.73
COMMD4-206ENST00000562610 IMMP2LQ96T52 175 aa10.48□□□□□ -0.73
COMMD4-206ENST00000562610 CTDSP1Q9GZU7 261 aa10.48□□□□□ -0.73
COMMD4-206ENST00000562610 AP5S1Q9NUS5 200 aa10.48□□□□□ -0.73
COMMD4-206ENST00000562610 LINC00959A0A1B0GUT2 108 aa10.47□□□□□ -0.73
COMMD4-206ENST00000562610 CCL25O15444 150 aa10.47□□□□□ -0.73
COMMD4-206ENST00000562610 SS18Q15532 418 aa10.47□□□□□ -0.73
COMMD4-206ENST00000562610 RNASE13Q5GAN3 156 aaKnown RBP10.47□□□□□ -0.73
COMMD4-206ENST00000562610 Q5VSD8 79 aa10.47□□□□□ -0.73
COMMD4-206ENST00000562610 RPL39P62891 51 aaKnown RBP10.46□□□□□ -0.73
COMMD4-206ENST00000562610 CFAP161Q6P656 301 aa10.46□□□□□ -0.73
COMMD4-206ENST00000562610 Q6ZUT4 128 aa10.46□□□□□ -0.73
COMMD4-206ENST00000562610 C15orf56Q8N910 161 aa10.46□□□□□ -0.73
COMMD4-206ENST00000562610 MAP1LC3AQ9H492 121 aa10.46□□□□□ -0.73
COMMD4-206ENST00000562610 LAMTOR2Q9Y2Q5 125 aa10.46□□□□□ -0.73
COMMD4-206ENST00000562610 LOC389332A0A1B0GUA5 103 aa10.45□□□□□ -0.74
COMMD4-206ENST00000562610 RAB5AP20339 215 aa10.45□□□□□ -0.74
COMMD4-206ENST00000562610 S100PP25815 95 aa10.45□□□□□ -0.74
COMMD4-206ENST00000562610 FOXI1Q12951 378 aa10.45□□□□□ -0.74
COMMD4-206ENST00000562610 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
COMMD4-206ENST00000562610 SCXQ7RTU7 201 aa10.45□□□□□ -0.74
COMMD4-206ENST00000562610 CSDC2Q9Y534 153 aaKnown RBP10.45□□□□□ -0.74
COMMD4-206ENST00000562610 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.44□□□□□ -0.74
COMMD4-206ENST00000562610 CNBPP62633 177 aaKnown RBP10.44□□□□□ -0.74
COMMD4-206ENST00000562610 C9orf163Q8N9P6 203 aa10.44□□□□□ -0.74
COMMD4-206ENST00000562610 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
COMMD4-206ENST00000562610 TRAV9-1A0A075B6T8 112 aa10.43□□□□□ -0.74
COMMD4-206ENST00000562610 FAM229AH3BQW9 127 aa10.43□□□□□ -0.74
COMMD4-206ENST00000562610 SPANXA1Q9NS26 97 aa10.43□□□□□ -0.74
COMMD4-206ENST00000562610 TRAV13-1A0A0B4J241 112 aa10.42□□□□□ -0.74
COMMD4-206ENST00000562610 C10orf91Q5T1B1 145 aa10.42□□□□□ -0.74
COMMD4-206ENST00000562610 CHAC1Q9BUX1 264 aa10.42□□□□□ -0.74
COMMD4-206ENST00000562610 CARHSP1Q9Y2V2 147 aaKnown RBP10.42□□□□□ -0.74
COMMD4-206ENST00000562610 C1orf196B1AJZ1 125 aa10.41□□□□□ -0.74
COMMD4-206ENST00000562610 RHEBQ15382 184 aa10.41□□□□□ -0.74
COMMD4-206ENST00000562610 CD164L2Q6UWJ8 174 aa10.41□□□□□ -0.74
COMMD4-206ENST00000562610 RPS10P5Q9NQ39 176 aa10.41□□□□□ -0.74
COMMD4-206ENST00000562610 IGHV3-64A0A075B6Q5 118 aa10.4□□□□□ -0.74
COMMD4-206ENST00000562610 GVQW2A0A096LPI5 108 aaPredicted RBP10.4□□□□□ -0.74
COMMD4-206ENST00000562610 IFI27P40305 119 aaPredicted RBP10.4□□□□□ -0.74
COMMD4-206ENST00000562610 VPS13BQ7Z7G8 4022 aa10.39□□□□□ -0.75
COMMD4-206ENST00000562610 IGHV1-58A0A0C4DH39 117 aa10.39□□□□□ -0.75
COMMD4-206ENST00000562610 PRSS47A8MTI9 375 aa10.39□□□□□ -0.75
COMMD4-206ENST00000562610 SLPIP03973 132 aa10.39□□□□□ -0.75
COMMD4-206ENST00000562610 MALP21145 153 aa10.39□□□□□ -0.75
COMMD4-206ENST00000562610 KIAA1644Q3SXP7 199 aa10.39□□□□□ -0.75
COMMD4-206ENST00000562610 LINC00528Q8N1L1 170 aa10.39□□□□□ -0.75
COMMD4-206ENST00000562610 Q8N8P6 123 aa10.39□□□□□ -0.75
COMMD4-206ENST00000562610 CIRBP-AS1Q8TBR5 109 aa10.39□□□□□ -0.75
COMMD4-206ENST00000562610 OPRPNQ99935 248 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-206ENST00000562610 FAT1Q14517 4588 aa10.38□□□□□ -0.75
COMMD4-206ENST00000562610 IFITM10A6NMD0 228 aa10.37□□□□□ -0.75
COMMD4-206ENST00000562610 COX7A2LO14548 114 aa10.37□□□□□ -0.75
COMMD4-206ENST00000562610 MRPS36P82909 103 aaKnown RBP10.37□□□□□ -0.75
COMMD4-206ENST00000562610 SDIM1Q6ZPB5 146 aa10.37□□□□□ -0.75
COMMD4-206ENST00000562610 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.37□□□□□ -0.75
COMMD4-206ENST00000562610 APOC3P02656 99 aa10.36□□□□□ -0.75
COMMD4-206ENST00000562610 INAFM2P0DMQ5 153 aa10.36□□□□□ -0.75
COMMD4-206ENST00000562610 NDUFA5Q16718 116 aa10.36□□□□□ -0.75
COMMD4-206ENST00000562610 ORMDL2Q53FV1 153 aa10.36□□□□□ -0.75
COMMD4-206ENST00000562610 LINC00526Q96FQ7 95 aa10.36□□□□□ -0.75
COMMD4-206ENST00000562610 NXT2Q9NPJ8 142 aaKnown RBP10.36□□□□□ -0.75
COMMD4-206ENST00000562610 CYSLTR1Q9Y271 337 aa10.36□□□□□ -0.75
COMMD4-206ENST00000562610 ZNF561-AS1K7EIQ3 104 aa10.35□□□□□ -0.75
COMMD4-206ENST00000562610 C2orf66Q6UXQ4 117 aa10.35□□□□□ -0.75
COMMD4-206ENST00000562610 C5orf38Q86SI9 138 aa10.35□□□□□ -0.75
COMMD4-206ENST00000562610 FAM104AQ969W3 186 aa10.35□□□□□ -0.75
COMMD4-206ENST00000562610 GNB1LQ9BYB4 327 aa10.35□□□□□ -0.75
COMMD4-206ENST00000562610 PANO1I0J062 215 aa10.34□□□□□ -0.75
COMMD4-206ENST00000562610 K7EMI3 77 aa10.34□□□□□ -0.75
COMMD4-206ENST00000562610 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
COMMD4-206ENST00000562610 COX19Q49B96 90 aa10.34□□□□□ -0.75
COMMD4-206ENST00000562610 TMEM141Q96I45 108 aa10.34□□□□□ -0.75
COMMD4-206ENST00000562610 CARD19Q96LW7 228 aa10.34□□□□□ -0.75
COMMD4-206ENST00000562610 PYGO1Q9Y3Y4 419 aa10.34□□□□□ -0.75
COMMD4-206ENST00000562610 IGLV4-3A0A075B6K6 122 aa10.33□□□□□ -0.76
COMMD4-206ENST00000562610 SNAPINO95295 136 aa10.33□□□□□ -0.76
COMMD4-206ENST00000562610 MT-ND6P03923 174 aa10.33□□□□□ -0.76
COMMD4-206ENST00000562610 CHTF8P0CG12 524 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms