RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 C7orf77A4D0Y5 90 aa8.53□□□□□ -1.04
SMAD3-213ENST00000560175 TNFRSF6BO95407 300 aa8.53□□□□□ -1.04
SMAD3-213ENST00000560175 PPBPP02775 128 aa8.53□□□□□ -1.04
SMAD3-213ENST00000560175 MT-ND4LP03901 98 aa8.53□□□□□ -1.04
SMAD3-213ENST00000560175 SLPIP03973 132 aa8.53□□□□□ -1.04
SMAD3-213ENST00000560175 CKS2P33552 79 aa8.53□□□□□ -1.04
SMAD3-213ENST00000560175 MRPL54Q6P161 138 aaKnown RBP8.53□□□□□ -1.04
SMAD3-213ENST00000560175 LINC00959A0A1B0GUT2 108 aa8.52□□□□□ -1.05
SMAD3-213ENST00000560175 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
SMAD3-213ENST00000560175 SDIM1Q6ZPB5 146 aa8.52□□□□□ -1.05
SMAD3-213ENST00000560175 C15orf56Q8N910 161 aa8.52□□□□□ -1.05
SMAD3-213ENST00000560175 CHCHD10Q8WYQ3 142 aaPredicted RBP8.52□□□□□ -1.05
SMAD3-213ENST00000560175 TMEM101Q96IK0 257 aa8.52□□□□□ -1.05
SMAD3-213ENST00000560175 BTF3L4Q96K17 158 aa8.52□□□□□ -1.05
SMAD3-213ENST00000560175 KIR2DL4Q99706 377 aa8.52□□□□□ -1.05
SMAD3-213ENST00000560175 TIMM21Q9BVV7 248 aa8.52□□□□□ -1.05
SMAD3-213ENST00000560175 TMEM218A2RU14 115 aa8.51□□□□□ -1.05
SMAD3-213ENST00000560175 GAGE12HA6NDE8 117 aa8.51□□□□□ -1.05
SMAD3-213ENST00000560175 D6R8Y8 96 aa8.51□□□□□ -1.05
SMAD3-213ENST00000560175 FAM229AH3BQW9 127 aa8.51□□□□□ -1.05
SMAD3-213ENST00000560175 TCAPO15273 167 aa8.51□□□□□ -1.05
SMAD3-213ENST00000560175 FOXI1Q12951 378 aa8.51□□□□□ -1.05
SMAD3-213ENST00000560175 SCXQ7RTU7 201 aa8.51□□□□□ -1.05
SMAD3-213ENST00000560175 ZNF664Q8N3J9 261 aa8.51□□□□□ -1.05
SMAD3-213ENST00000560175 UBE2D4Q9Y2X8 147 aa8.51□□□□□ -1.05
SMAD3-213ENST00000560175 CCL25O15444 150 aa8.5□□□□□ -1.05
SMAD3-213ENST00000560175 ADCYAP1P18509 176 aa8.5□□□□□ -1.05
SMAD3-213ENST00000560175 FCER1GP30273 86 aa8.5□□□□□ -1.05
SMAD3-213ENST00000560175 CFAP161Q6P656 301 aa8.5□□□□□ -1.05
SMAD3-213ENST00000560175 CIRBP-AS1Q8TBR5 109 aa8.5□□□□□ -1.05
SMAD3-213ENST00000560175 FAM104AQ969W3 186 aa8.5□□□□□ -1.05
SMAD3-213ENST00000560175 IMMP2LQ96T52 175 aa8.5□□□□□ -1.05
SMAD3-213ENST00000560175 SMIM2Q9BVW6 85 aa8.5□□□□□ -1.05
SMAD3-213ENST00000560175 hDV102S1A0JD36 115 aa8.49□□□□□ -1.05
SMAD3-213ENST00000560175 NPYP01303 97 aa8.49□□□□□ -1.05
SMAD3-213ENST00000560175 SMAGPQ0VAQ4 97 aa8.49□□□□□ -1.05
SMAD3-213ENST00000560175 CIRBPQ14011 172 aaKnown RBP8.49□□□□□ -1.05
SMAD3-213ENST00000560175 ORMDL3Q8N138 153 aa8.49□□□□□ -1.05
SMAD3-213ENST00000560175 GVQW2A0A096LPI5 108 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-213ENST00000560175 IGKV3OR2-268A0A0C4DH90 116 aa8.48□□□□□ -1.05
SMAD3-213ENST00000560175 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
SMAD3-213ENST00000560175 TMEM136Q6ZRR5 245 aa8.48□□□□□ -1.05
SMAD3-213ENST00000560175 SEC11CQ9BY50 192 aa8.48□□□□□ -1.05
SMAD3-213ENST00000560175 LAMTOR2Q9Y2Q5 125 aa8.48□□□□□ -1.05
SMAD3-213ENST00000560175 C10orf91Q5T1B1 145 aa8.47□□□□□ -1.05
SMAD3-213ENST00000560175 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
SMAD3-213ENST00000560175 TMEM18Q96B42 140 aa8.47□□□□□ -1.05
SMAD3-213ENST00000560175 AP5S1Q9NUS5 200 aa8.47□□□□□ -1.05
SMAD3-213ENST00000560175 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
SMAD3-213ENST00000560175 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-213ENST00000560175 C1orf196B1AJZ1 125 aa8.46□□□□□ -1.06
SMAD3-213ENST00000560175 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-213ENST00000560175 SS18Q15532 418 aa8.46□□□□□ -1.06
SMAD3-213ENST00000560175 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.06
SMAD3-213ENST00000560175 PRELID3AQ96N28 172 aa8.46□□□□□ -1.06
SMAD3-213ENST00000560175 CTDSP1Q9GZU7 261 aa8.46□□□□□ -1.06
SMAD3-213ENST00000560175 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-213ENST00000560175 TRAV9-1A0A075B6T8 112 aa8.45□□□□□ -1.06
SMAD3-213ENST00000560175 PANO1I0J062 215 aa8.45□□□□□ -1.06
SMAD3-213ENST00000560175 XCL1P47992 114 aa8.45□□□□□ -1.06
SMAD3-213ENST00000560175 MRPS36P82909 103 aaKnown RBP8.45□□□□□ -1.06
SMAD3-213ENST00000560175 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.45□□□□□ -1.06
SMAD3-213ENST00000560175 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
SMAD3-213ENST00000560175 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
SMAD3-213ENST00000560175 PLA2G1BP04054 148 aaKnown RBP8.44□□□□□ -1.06
SMAD3-213ENST00000560175 RPL39P62891 51 aaKnown RBP8.44□□□□□ -1.06
SMAD3-213ENST00000560175 SPANXA1Q9NS26 97 aa8.44□□□□□ -1.06
SMAD3-213ENST00000560175 PYGO1Q9Y3Y4 419 aa8.44□□□□□ -1.06
SMAD3-213ENST00000560175 Q6ZUT4 128 aa8.43□□□□□ -1.06
SMAD3-213ENST00000560175 HIGD2BQ4VC39 106 aa8.42□□□□□ -1.06
SMAD3-213ENST00000560175 CARHSP1Q9Y2V2 147 aaKnown RBP8.42□□□□□ -1.06
SMAD3-213ENST00000560175 K7EMI3 77 aa8.41□□□□□ -1.06
SMAD3-213ENST00000560175 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
SMAD3-213ENST00000560175 COMMD7Q86VX2 200 aa8.41□□□□□ -1.06
SMAD3-213ENST00000560175 Q8N8P6 123 aa8.41□□□□□ -1.06
SMAD3-213ENST00000560175 MAP1LC3AQ9H492 121 aa8.41□□□□□ -1.06
SMAD3-213ENST00000560175 RAB5AP20339 215 aa8.4□□□□□ -1.06
SMAD3-213ENST00000560175 SPACA4Q8TDM5 124 aa8.4□□□□□ -1.06
SMAD3-213ENST00000560175 OPRPNQ99935 248 aaPredicted RBP8.4□□□□□ -1.06
SMAD3-213ENST00000560175 PKHD1L1Q86WI1 4243 aa8.4□□□□□ -1.06
SMAD3-213ENST00000560175 TRAV13-1A0A0B4J241 112 aa8.39□□□□□ -1.07
SMAD3-213ENST00000560175 IGHV3OR16-9A0A0B4J2B5 98 aa8.39□□□□□ -1.07
SMAD3-213ENST00000560175 COX7A2LO14548 114 aa8.39□□□□□ -1.07
SMAD3-213ENST00000560175 COX6A2Q02221 97 aa8.39□□□□□ -1.07
SMAD3-213ENST00000560175 PRSS3P2Q8NHM4 247 aa8.39□□□□□ -1.07
SMAD3-213ENST00000560175 GNB1LQ9BYB4 327 aa8.39□□□□□ -1.07
SMAD3-213ENST00000560175 PLAC8Q9NZF1 115 aa8.39□□□□□ -1.07
SMAD3-213ENST00000560175 A0A087WYN8 130 aa8.38□□□□□ -1.07
SMAD3-213ENST00000560175 LOC389332A0A1B0GUA5 103 aa8.38□□□□□ -1.07
SMAD3-213ENST00000560175 NPSP0C0P6 89 aa8.38□□□□□ -1.07
SMAD3-213ENST00000560175 DMBT1Q9UGM3 2413 aaPredicted RBP8.37□□□□□ -1.07
SMAD3-213ENST00000560175 IGLV4-3A0A075B6K6 122 aa8.37□□□□□ -1.07
SMAD3-213ENST00000560175 CHTF8P0CG12 524 aa8.37□□□□□ -1.07
SMAD3-213ENST00000560175 IFI27P40305 119 aaPredicted RBP8.37□□□□□ -1.07
SMAD3-213ENST00000560175 LINC00526Q96FQ7 95 aa8.37□□□□□ -1.07
SMAD3-213ENST00000560175 C2orf48Q96LS8 159 aa8.37□□□□□ -1.07
SMAD3-213ENST00000560175 NXT2Q9NPJ8 142 aaKnown RBP8.37□□□□□ -1.07
SMAD3-213ENST00000560175 IGIPA6NJ69 53 aa8.36□□□□□ -1.07
SMAD3-213ENST00000560175 ZNF561-AS1K7EIQ3 104 aa8.36□□□□□ -1.07
SMAD3-213ENST00000560175 SYCNQ0VAF6 134 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms