RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 MAP1LC3AQ9H492 121 aa11.11□□□□□ -0.63
RPL28-209ENST00000560055 PGPEP1Q9NXJ5 209 aa11.11□□□□□ -0.63
RPL28-209ENST00000560055 DNAH8Q96JB1 4490 aa11.11□□□□□ -0.63
RPL28-209ENST00000560055 TGIF2-C20orf24A0A0A6YYL0 155 aa11.1□□□□□ -0.63
RPL28-209ENST00000560055 MT-ND6P03923 174 aa11.1□□□□□ -0.63
RPL28-209ENST00000560055 KIAA1644Q3SXP7 199 aa11.1□□□□□ -0.63
RPL28-209ENST00000560055 CDPF1Q6NVV7 123 aa11.1□□□□□ -0.63
RPL28-209ENST00000560055 OR5A1Q8NGJ0 315 aa11.1□□□□□ -0.63
RPL28-209ENST00000560055 YPEL4Q96NS1 127 aa11.1□□□□□ -0.63
RPL28-209ENST00000560055 CDC42SE2Q9NRR3 84 aa11.1□□□□□ -0.63
RPL28-209ENST00000560055 UBE2D4Q9Y2X8 147 aa11.1□□□□□ -0.63
RPL28-209ENST00000560055 CSDC2Q9Y534 153 aaKnown RBP11.1□□□□□ -0.63
RPL28-209ENST00000560055 LECT2O14960 151 aa11.09□□□□□ -0.63
RPL28-209ENST00000560055 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
RPL28-209ENST00000560055 TMEM101Q96IK0 257 aa11.09□□□□□ -0.63
RPL28-209ENST00000560055 IGLV10-54A0A075B6I4 117 aa11.08□□□□□ -0.64
RPL28-209ENST00000560055 LOC389332A0A1B0GUA5 103 aa11.08□□□□□ -0.64
RPL28-209ENST00000560055 Q8N8P6 123 aa11.08□□□□□ -0.64
RPL28-209ENST00000560055 TIMM21Q9BVV7 248 aa11.08□□□□□ -0.64
RPL28-209ENST00000560055 RAB5AP20339 215 aa11.07□□□□□ -0.64
RPL28-209ENST00000560055 RPL39P62891 51 aaKnown RBP11.07□□□□□ -0.64
RPL28-209ENST00000560055 SMAGPQ0VAQ4 97 aa11.07□□□□□ -0.64
RPL28-209ENST00000560055 NTN5Q8WTR8 489 aaPredicted RBP11.07□□□□□ -0.64
RPL28-209ENST00000560055 TMEM18Q96B42 140 aa11.07□□□□□ -0.64
RPL28-209ENST00000560055 MRPL18Q9H0U6 180 aaKnown RBP11.07□□□□□ -0.64
RPL28-209ENST00000560055 ZNF664Q8N3J9 261 aa11.06□□□□□ -0.64
RPL28-209ENST00000560055 ALKBH7Q9BT30 221 aaPredicted RBP11.06□□□□□ -0.64
RPL28-209ENST00000560055 NXT2Q9NPJ8 142 aaKnown RBP11.06□□□□□ -0.64
RPL28-209ENST00000560055 ABCA13Q86UQ4 5058 aa11.06□□□□□ -0.64
RPL28-209ENST00000560055 IGKV3OR2-268A0A0C4DH90 116 aa11.05□□□□□ -0.64
RPL28-209ENST00000560055 K7EMI3 77 aa11.05□□□□□ -0.64
RPL28-209ENST00000560055 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
RPL28-209ENST00000560055 SPANXA1Q9NS26 97 aa11.05□□□□□ -0.64
RPL28-209ENST00000560055 IFI27P40305 119 aaPredicted RBP11.04□□□□□ -0.64
RPL28-209ENST00000560055 FABP9Q0Z7S8 132 aa11.04□□□□□ -0.64
RPL28-209ENST00000560055 DGAT2L7PQ6IED9 249 aa11.04□□□□□ -0.64
RPL28-209ENST00000560055 CHCHD10Q8WYQ3 142 aaPredicted RBP11.04□□□□□ -0.64
RPL28-209ENST00000560055 LINC00959A0A1B0GUT2 108 aa11.03□□□□□ -0.64
RPL28-209ENST00000560055 USP17L23D6RBM5 183 aa11.03□□□□□ -0.64
RPL28-209ENST00000560055 Q6ZUT4 128 aa11.03□□□□□ -0.64
RPL28-209ENST00000560055 CBLN2Q8IUK8 224 aa11.03□□□□□ -0.64
RPL28-209ENST00000560055 IGLV5-52A0A0A0MRZ9 124 aa11.02□□□□□ -0.65
RPL28-209ENST00000560055 MRPS36P82909 103 aaKnown RBP11.02□□□□□ -0.65
RPL28-209ENST00000560055 ORMDL2Q53FV1 153 aa11.02□□□□□ -0.65
RPL28-209ENST00000560055 SMCO4Q9NRQ5 59 aa11.02□□□□□ -0.65
RPL28-209ENST00000560055 TRAPPC1Q9Y5R8 145 aa11.02□□□□□ -0.65
RPL28-209ENST00000560055 GAGE12HA6NDE8 117 aa11.01□□□□□ -0.65
RPL28-209ENST00000560055 C14orf177Q52M58 125 aa11.01□□□□□ -0.65
RPL28-209ENST00000560055 RNASE13Q5GAN3 156 aaKnown RBP11.01□□□□□ -0.65
RPL28-209ENST00000560055 KRTAP4-5Q9BYR2 181 aa11.01□□□□□ -0.65
RPL28-209ENST00000560055 PYGO1Q9Y3Y4 419 aa11.01□□□□□ -0.65
RPL28-209ENST00000560055 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
RPL28-209ENST00000560055 LINC01546A6NGU7 62 aa11□□□□□ -0.65
RPL28-209ENST00000560055 KRTAP10-1P60331 282 aa11□□□□□ -0.65
RPL28-209ENST00000560055 FOXI1Q12951 378 aa11□□□□□ -0.65
RPL28-209ENST00000560055 CCL25O15444 150 aa10.99□□□□□ -0.65
RPL28-209ENST00000560055 PRSS1P07477 247 aa10.99□□□□□ -0.65
RPL28-209ENST00000560055 GCSHP23434 173 aa10.99□□□□□ -0.65
RPL28-209ENST00000560055 C2orf66Q6UXQ4 117 aa10.99□□□□□ -0.65
RPL28-209ENST00000560055 OPRPNQ99935 248 aaPredicted RBP10.99□□□□□ -0.65
RPL28-209ENST00000560055 CYSLTR1Q9Y271 337 aa10.99□□□□□ -0.65
RPL28-209ENST00000560055 XCL1P47992 114 aa10.98□□□□□ -0.65
RPL28-209ENST00000560055 SS18Q15532 418 aa10.98□□□□□ -0.65
RPL28-209ENST00000560055 PRSS3P2Q8NHM4 247 aa10.98□□□□□ -0.65
RPL28-209ENST00000560055 IGLV4-3A0A075B6K6 122 aa10.97□□□□□ -0.65
RPL28-209ENST00000560055 C1orf196B1AJZ1 125 aa10.97□□□□□ -0.65
RPL28-209ENST00000560055 CDK2AP2O75956 126 aa10.97□□□□□ -0.65
RPL28-209ENST00000560055 CD164L2Q6UWJ8 174 aa10.97□□□□□ -0.65
RPL28-209ENST00000560055 C15orf56Q8N910 161 aa10.97□□□□□ -0.65
RPL28-209ENST00000560055 TRAV13-1A0A0B4J241 112 aa10.96□□□□□ -0.65
RPL28-209ENST00000560055 IGIPA6NJ69 53 aa10.96□□□□□ -0.65
RPL28-209ENST00000560055 C18orf32Q8TCD1 76 aa10.96□□□□□ -0.65
RPL28-209ENST00000560055 NPSP0C0P6 89 aa10.95□□□□□ -0.66
RPL28-209ENST00000560055 G0S2P27469 103 aa10.95□□□□□ -0.66
RPL28-209ENST00000560055 TOMM6Q96B49 74 aa10.95□□□□□ -0.66
RPL28-209ENST00000560055 TMEM141Q96I45 108 aa10.95□□□□□ -0.66
RPL28-209ENST00000560055 CFAP161Q6P656 301 aa10.93□□□□□ -0.66
RPL28-209ENST00000560055 FA2HQ7L5A8 372 aa10.93□□□□□ -0.66
RPL28-209ENST00000560055 URB1-AS1Q96HZ7 61 aa10.93□□□□□ -0.66
RPL28-209ENST00000560055 TIMM17AQ99595 171 aa10.93□□□□□ -0.66
RPL28-209ENST00000560055 GVQW2A0A096LPI5 108 aaPredicted RBP10.92□□□□□ -0.66
RPL28-209ENST00000560055 hDV102S1A0JD36 115 aa10.92□□□□□ -0.66
RPL28-209ENST00000560055 IFITM10A6NMD0 228 aa10.92□□□□□ -0.66
RPL28-209ENST00000560055 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
RPL28-209ENST00000560055 LINC00173Q6ZV60 143 aa10.92□□□□□ -0.66
RPL28-209ENST00000560055 AMELXQ99217 191 aa10.92□□□□□ -0.66
RPL28-209ENST00000560055 FAT1Q14517 4588 aa10.92□□□□□ -0.66
RPL28-209ENST00000560055 COLCA2A8K830 154 aa10.91□□□□□ -0.66
RPL28-209ENST00000560055 SLPIP03973 132 aa10.91□□□□□ -0.66
RPL28-209ENST00000560055 LINC01620Q4KN68 170 aa10.91□□□□□ -0.66
RPL28-209ENST00000560055 AP5S1Q9NUS5 200 aa10.91□□□□□ -0.66
RPL28-209ENST00000560055 IGHV1-58A0A0C4DH39 117 aa10.9□□□□□ -0.66
RPL28-209ENST00000560055 LINC01549A6NIU2 74 aa10.9□□□□□ -0.66
RPL28-209ENST00000560055 COX7A2LO14548 114 aa10.9□□□□□ -0.66
RPL28-209ENST00000560055 LINC00614P0C842 121 aa10.9□□□□□ -0.66
RPL28-209ENST00000560055 ZC2HC1BQ5TFG8 222 aa10.9□□□□□ -0.66
RPL28-209ENST00000560055 Q6ZN92 141 aa10.9□□□□□ -0.66
RPL28-209ENST00000560055 TEX43Q6ZNM6 134 aa10.9□□□□□ -0.66
RPL28-209ENST00000560055 Q6ZSA8 131 aa10.9□□□□□ -0.66
RPL28-209ENST00000560055 ERASQ7Z444 233 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms