RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 TRBV24-1A0A075B6N3 115 aa9.53□□□□□ -0.88
RPL28-208ENST00000559463 PPP1R2P9O14990 202 aa9.53□□□□□ -0.88
RPL28-208ENST00000559463 SLPIP03973 132 aa9.53□□□□□ -0.88
RPL28-208ENST00000559463 CLLU1Q5K131 121 aa9.53□□□□□ -0.88
RPL28-208ENST00000559463 TMEM101Q96IK0 257 aa9.53□□□□□ -0.88
RPL28-208ENST00000559463 BTF3L4Q96K17 158 aa9.53□□□□□ -0.88
RPL28-208ENST00000559463 LINC00862A6NCI5 91 aa9.52□□□□□ -0.89
RPL28-208ENST00000559463 D6R8Y8 96 aa9.52□□□□□ -0.89
RPL28-208ENST00000559463 S100A8P05109 93 aa9.52□□□□□ -0.89
RPL28-208ENST00000559463 FCER1GP30273 86 aa9.52□□□□□ -0.89
RPL28-208ENST00000559463 CKS2P33552 79 aa9.52□□□□□ -0.89
RPL28-208ENST00000559463 IFITM2Q01629 132 aa9.52□□□□□ -0.89
RPL28-208ENST00000559463 PNRC1Q12796 327 aaPredicted RBP9.52□□□□□ -0.89
RPL28-208ENST00000559463 FOXI1Q12951 378 aa9.52□□□□□ -0.89
RPL28-208ENST00000559463 CDC42SE2Q9NRR3 84 aa9.52□□□□□ -0.89
RPL28-208ENST00000559463 LINC00959A0A1B0GUT2 108 aa9.51□□□□□ -0.89
RPL28-208ENST00000559463 F8W036 122 aa9.51□□□□□ -0.89
RPL28-208ENST00000559463 PANO1I0J062 215 aa9.51□□□□□ -0.89
RPL28-208ENST00000559463 TNFRSF6BO95407 300 aa9.51□□□□□ -0.89
RPL28-208ENST00000559463 ATP5L2Q7Z4Y8 100 aa9.51□□□□□ -0.89
RPL28-208ENST00000559463 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
RPL28-208ENST00000559463 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.51□□□□□ -0.89
RPL28-208ENST00000559463 NPYP01303 97 aa9.5□□□□□ -0.89
RPL28-208ENST00000559463 XCL1P47992 114 aa9.5□□□□□ -0.89
RPL28-208ENST00000559463 RPL32P62910 135 aaKnown RBP9.5□□□□□ -0.89
RPL28-208ENST00000559463 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
RPL28-208ENST00000559463 ZNF664Q8N3J9 261 aa9.5□□□□□ -0.89
RPL28-208ENST00000559463 KIR2DL4Q99706 377 aa9.5□□□□□ -0.89
RPL28-208ENST00000559463 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
RPL28-208ENST00000559463 CCL25O15444 150 aa9.49□□□□□ -0.89
RPL28-208ENST00000559463 PLA2G1BP04054 148 aaKnown RBP9.49□□□□□ -0.89
RPL28-208ENST00000559463 HIGD2BQ4VC39 106 aa9.49□□□□□ -0.89
RPL28-208ENST00000559463 CFAP161Q6P656 301 aa9.49□□□□□ -0.89
RPL28-208ENST00000559463 SMIM2Q9BVW6 85 aa9.49□□□□□ -0.89
RPL28-208ENST00000559463 AP5S1Q9NUS5 200 aa9.49□□□□□ -0.89
RPL28-208ENST00000559463 LRP1Q07954 4544 aaKnown RBP9.48□□□□□ -0.89
RPL28-208ENST00000559463 ADCYAP1P18509 176 aa9.48□□□□□ -0.89
RPL28-208ENST00000559463 KRTAP10-4P60372 401 aaPredicted RBP9.48□□□□□ -0.89
RPL28-208ENST00000559463 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
RPL28-208ENST00000559463 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
RPL28-208ENST00000559463 FAT3Q8TDW7 4589 aa9.47□□□□□ -0.89
RPL28-208ENST00000559463 IGHV3-64A0A075B6Q5 118 aa9.47□□□□□ -0.89
RPL28-208ENST00000559463 GVQW2A0A096LPI5 108 aaPredicted RBP9.47□□□□□ -0.89
RPL28-208ENST00000559463 PHOX2AO14813 284 aa9.47□□□□□ -0.89
RPL28-208ENST00000559463 MT-ND4LP03901 98 aa9.47□□□□□ -0.89
RPL28-208ENST00000559463 RNASE13Q5GAN3 156 aaKnown RBP9.47□□□□□ -0.89
RPL28-208ENST00000559463 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.46□□□□□ -0.9
RPL28-208ENST00000559463 PPBPP02775 128 aa9.46□□□□□ -0.9
RPL28-208ENST00000559463 RPL39P62891 51 aaKnown RBP9.46□□□□□ -0.9
RPL28-208ENST00000559463 CIRBPQ14011 172 aaKnown RBP9.46□□□□□ -0.9
RPL28-208ENST00000559463 SS18Q15532 418 aa9.46□□□□□ -0.9
RPL28-208ENST00000559463 Q6ZUT4 128 aa9.46□□□□□ -0.9
RPL28-208ENST00000559463 ORMDL3Q8N138 153 aa9.46□□□□□ -0.9
RPL28-208ENST00000559463 TIMM21Q9BVV7 248 aa9.46□□□□□ -0.9
RPL28-208ENST00000559463 SMAGPQ0VAQ4 97 aa9.45□□□□□ -0.9
RPL28-208ENST00000559463 CD164L2Q6UWJ8 174 aa9.45□□□□□ -0.9
RPL28-208ENST00000559463 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
RPL28-208ENST00000559463 TCAPO15273 167 aa9.44□□□□□ -0.9
RPL28-208ENST00000559463 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
RPL28-208ENST00000559463 UQCC3Q6UW78 93 aa9.44□□□□□ -0.9
RPL28-208ENST00000559463 TMEM136Q6ZRR5 245 aa9.44□□□□□ -0.9
RPL28-208ENST00000559463 TMEM18Q96B42 140 aa9.44□□□□□ -0.9
RPL28-208ENST00000559463 PRELID3AQ96N28 172 aa9.44□□□□□ -0.9
RPL28-208ENST00000559463 IGHV1-58A0A0C4DH39 117 aa9.43□□□□□ -0.9
RPL28-208ENST00000559463 TMEM218A2RU14 115 aa9.43□□□□□ -0.9
RPL28-208ENST00000559463 LINC00526Q96FQ7 95 aa9.43□□□□□ -0.9
RPL28-208ENST00000559463 TRAV13-1A0A0B4J241 112 aa9.42□□□□□ -0.9
RPL28-208ENST00000559463 C1orf196B1AJZ1 125 aa9.42□□□□□ -0.9
RPL28-208ENST00000559463 SPACA4Q8TDM5 124 aa9.42□□□□□ -0.9
RPL28-208ENST00000559463 COX6A2Q02221 97 aa9.41□□□□□ -0.9
RPL28-208ENST00000559463 OPRPNQ99935 248 aaPredicted RBP9.41□□□□□ -0.9
RPL28-208ENST00000559463 SPANXA1Q9NS26 97 aa9.41□□□□□ -0.9
RPL28-208ENST00000559463 PRSS47A8MTI9 375 aa9.4□□□□□ -0.9
RPL28-208ENST00000559463 PRSS3P2Q8NHM4 247 aa9.4□□□□□ -0.9
RPL28-208ENST00000559463 IMMP2LQ96T52 175 aa9.4□□□□□ -0.9
RPL28-208ENST00000559463 LAMTOR2Q9Y2Q5 125 aa9.4□□□□□ -0.9
RPL28-208ENST00000559463 A0A087WYN8 130 aa9.39□□□□□ -0.91
RPL28-208ENST00000559463 LOC389332A0A1B0GUA5 103 aa9.39□□□□□ -0.91
RPL28-208ENST00000559463 COX7A2LO14548 114 aa9.39□□□□□ -0.91
RPL28-208ENST00000559463 RPL37AP61513 92 aaKnown RBP9.39□□□□□ -0.91
RPL28-208ENST00000559463 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
RPL28-208ENST00000559463 COMMD7Q86VX2 200 aa9.39□□□□□ -0.91
RPL28-208ENST00000559463 RAB5AP20339 215 aa9.38□□□□□ -0.91
RPL28-208ENST00000559463 CARD19Q96LW7 228 aa9.38□□□□□ -0.91
RPL28-208ENST00000559463 SEC11CQ9BY50 192 aa9.38□□□□□ -0.91
RPL28-208ENST00000559463 MAP1LC3AQ9H492 121 aa9.38□□□□□ -0.91
RPL28-208ENST00000559463 A0A096LNI7 61 aa9.37□□□□□ -0.91
RPL28-208ENST00000559463 IGKV2-24A0A0C4DH68 120 aa9.37□□□□□ -0.91
RPL28-208ENST00000559463 ZNF561-AS1K7EIQ3 104 aa9.37□□□□□ -0.91
RPL28-208ENST00000559463 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
RPL28-208ENST00000559463 Q8N8P6 123 aa9.37□□□□□ -0.91
RPL28-208ENST00000559463 CTDSP1Q9GZU7 261 aa9.37□□□□□ -0.91
RPL28-208ENST00000559463 PLAC8Q9NZF1 115 aa9.37□□□□□ -0.91
RPL28-208ENST00000559463 IGLV4-69A0A075B6H9 119 aa9.36□□□□□ -0.91
RPL28-208ENST00000559463 MALP21145 153 aa9.36□□□□□ -0.91
RPL28-208ENST00000559463 HNRNPA3P51991 378 aaKnown RBP9.36□□□□□ -0.91
RPL28-208ENST00000559463 IGLV4-3A0A075B6K6 122 aa9.35□□□□□ -0.91
RPL28-208ENST00000559463 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
RPL28-208ENST00000559463 IGHV3OR16-9A0A0B4J2B5 98 aa9.35□□□□□ -0.91
RPL28-208ENST00000559463 IFITM10A6NMD0 228 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms