RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 FAM236CP0DP71 79 aa11.98□□□□□ -0.49
PBX1-215ENST00000559240 SPATA3Q8NHX4 192 aa11.98□□□□□ -0.49
PBX1-215ENST00000559240 COX7CP15954 63 aa11.97□□□□□ -0.49
PBX1-215ENST00000559240 ERCC8Q13216 396 aa11.97□□□□□ -0.49
PBX1-215ENST00000559240 U3KQK5 164 aa11.97□□□□□ -0.49
PBX1-215ENST00000559240 DEFB131AP59861 70 aa11.97□□□□□ -0.49
PBX1-215ENST00000559240 LYZL1Q6UWQ5 148 aa11.97□□□□□ -0.49
PBX1-215ENST00000559240 SETD2Q9BYW2 2564 aaPredicted RBP11.96□□□□□ -0.49
PBX1-215ENST00000559240 KLLNB2CW77 178 aa11.96□□□□□ -0.5
PBX1-215ENST00000559240 ATRQ13535 2644 aa11.95□□□□□ -0.5
PBX1-215ENST00000559240 ZFAND2AQ8N6M9 145 aa11.95□□□□□ -0.5
PBX1-215ENST00000559240 RPL13AP40429 203 aaKnown RBP11.95□□□□□ -0.5
PBX1-215ENST00000559240 LINC01620Q4KN68 170 aa11.95□□□□□ -0.5
PBX1-215ENST00000559240 A0A0U1RQV1 116 aa11.94□□□□□ -0.5
PBX1-215ENST00000559240 F6UB75 175 aa11.94□□□□□ -0.5
PBX1-215ENST00000559240 GATA1P15976 413 aaPredicted RBP11.94□□□□□ -0.5
PBX1-215ENST00000559240 EGFEM1PQ0D2K5 195 aa11.94□□□□□ -0.5
PBX1-215ENST00000559240 CRYGAP11844 174 aa11.94□□□□□ -0.5
PBX1-215ENST00000559240 Q8TAT8 98 aa11.94□□□□□ -0.5
PBX1-215ENST00000559240 C8orf49Q96NF6 230 aa11.94□□□□□ -0.5
PBX1-215ENST00000559240 MDFIQ99750 246 aa11.93□□□□□ -0.5
PBX1-215ENST00000559240 CRIP1P50238 77 aa11.93□□□□□ -0.5
PBX1-215ENST00000559240 C2orf48Q96LS8 159 aa11.93□□□□□ -0.5
PBX1-215ENST00000559240 PRO1854Q9UHT4 67 aa11.93□□□□□ -0.5
PBX1-215ENST00000559240 PFN2P35080 140 aa11.93□□□□□ -0.5
PBX1-215ENST00000559240 C2orf82Q6UX34 121 aa11.93□□□□□ -0.5
PBX1-215ENST00000559240 ANK2Q01484 3957 aa11.92□□□□□ -0.5
PBX1-215ENST00000559240 TRAV13-1A0A0B4J241 112 aa11.91□□□□□ -0.5
PBX1-215ENST00000559240 DEFB1P60022 68 aa11.91□□□□□ -0.5
PBX1-215ENST00000559240 Q1RN00 199 aa11.91□□□□□ -0.5
PBX1-215ENST00000559240 TMEM170BQ5T4T1 132 aa11.91□□□□□ -0.5
PBX1-215ENST00000559240 LINC01559Q495D7 138 aa11.9□□□□□ -0.5
PBX1-215ENST00000559240 KNCNA6PVL3 124 aa11.9□□□□□ -0.5
PBX1-215ENST00000559240 PLNP26678 52 aa11.9□□□□□ -0.5
PBX1-215ENST00000559240 ZNF80P51504 273 aaPredicted RBP11.9□□□□□ -0.5
PBX1-215ENST00000559240 J3QQQ9 107 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 SH2D1AO60880 128 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 Q8N8P6 123 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 IL17DQ8TAD2 202 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 LINC00467Q9BRT7 94 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 MSRB1Q9NZV6 116 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 TRAV21A0A0B4J279 112 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 RBMY1BA6NDE4 496 aaKnown RBP11.89□□□□□ -0.51
PBX1-215ENST00000559240 RBMY1EA6NEQ0 496 aaKnown RBP11.89□□□□□ -0.51
PBX1-215ENST00000559240 SPRY2O43597 315 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 RBMY1DP0C7P1 496 aaKnown RBP11.89□□□□□ -0.51
PBX1-215ENST00000559240 TMEM258P61165 79 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 ATXN8Q156A1 80 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 PRR9Q5T870 116 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 SMCR5Q8TEV8 140 aa11.89□□□□□ -0.51
PBX1-215ENST00000559240 TRBV10-2A0A0K0K1G8 114 aa11.88□□□□□ -0.51
PBX1-215ENST00000559240 STHQ8IWL8 128 aa11.88□□□□□ -0.51
PBX1-215ENST00000559240 WNK1Q9H4A3 2382 aa11.87□□□□□ -0.51
PBX1-215ENST00000559240 A8MZ25 164 aa11.85□□□□□ -0.51
PBX1-215ENST00000559240 EIF4EBP3O60516 100 aaPredicted RBP11.85□□□□□ -0.51
PBX1-215ENST00000559240 ZNF575Q86XF7 245 aa11.85□□□□□ -0.51
PBX1-215ENST00000559240 F8VRH5 84 aa11.85□□□□□ -0.51
PBX1-215ENST00000559240 C1orf195Q5TG92 126 aa11.85□□□□□ -0.51
PBX1-215ENST00000559240 IMUPQ9GZP8 106 aa11.85□□□□□ -0.51
PBX1-215ENST00000559240 H7C1H1 209 aa11.84□□□□□ -0.51
PBX1-215ENST00000559240 H7C423 109 aa11.84□□□□□ -0.51
PBX1-215ENST00000559240 IGHV3-30P01768 117 aa11.84□□□□□ -0.51
PBX1-215ENST00000559240 IGHV3-33P01772 117 aa11.84□□□□□ -0.51
PBX1-215ENST00000559240 IGHV3-30-5P0DP03 117 aa11.84□□□□□ -0.51
PBX1-215ENST00000559240 MED14OSP0DP75 135 aa11.84□□□□□ -0.51
PBX1-215ENST00000559240 KPRPQ5T749 579 aaPredicted RBP11.84□□□□□ -0.51
PBX1-215ENST00000559240 A0A0J9YY99 117 aa11.84□□□□□ -0.51
PBX1-215ENST00000559240 C11orf21Q9P2W6 132 aa11.83□□□□□ -0.52
PBX1-215ENST00000559240 FAM240AA0A1B0GVK7 77 aa11.83□□□□□ -0.52
PBX1-215ENST00000559240 RNASE4P34096 147 aaKnown RBP11.83□□□□□ -0.52
PBX1-215ENST00000559240 DPH3P1Q9H4G8 78 aa11.83□□□□□ -0.52
PBX1-215ENST00000559240 VWFP04275 2813 aa11.83□□□□□ -0.52
PBX1-215ENST00000559240 IGKV3D-20A0A0C4DH25 116 aa11.82□□□□□ -0.52
PBX1-215ENST00000559240 SPINK13Q1W4C9 94 aa11.82□□□□□ -0.52
PBX1-215ENST00000559240 RNF185Q96GF1 192 aa11.82□□□□□ -0.52
PBX1-215ENST00000559240 SPANXCQ9NY87 97 aa11.82□□□□□ -0.52
PBX1-215ENST00000559240 CMYA5Q8N3K9 4069 aa11.82□□□□□ -0.52
PBX1-215ENST00000559240 INSP01308 110 aa11.81□□□□□ -0.52
PBX1-215ENST00000559240 C14orf178Q8N769 122 aaPredicted RBP11.81□□□□□ -0.52
PBX1-215ENST00000559240 KRTAP10-11P60412 298 aa11.81□□□□□ -0.52
PBX1-215ENST00000559240 OXLD1Q5BKU9 147 aa11.81□□□□□ -0.52
PBX1-215ENST00000559240 C9orf85Q96MD7 179 aa11.81□□□□□ -0.52
PBX1-215ENST00000559240 GIG44P09565 113 aaPredicted RBP11.81□□□□□ -0.52
PBX1-215ENST00000559240 CNFNQ9BYD5 112 aa11.81□□□□□ -0.52
PBX1-215ENST00000559240 IGKV3-20P01619 116 aa11.8□□□□□ -0.52
PBX1-215ENST00000559240 LINC01561Q8N1V8 128 aa11.8□□□□□ -0.52
PBX1-215ENST00000559240 WFDC10AQ9H1F0 79 aa11.8□□□□□ -0.52
PBX1-215ENST00000559240 STAB1Q9NY15 2570 aa11.8□□□□□ -0.52
PBX1-215ENST00000559240 COL6A5A8TX70 2615 aa11.8□□□□□ -0.52
PBX1-215ENST00000559240 TRIAP1O43715 76 aa11.79□□□□□ -0.52
PBX1-215ENST00000559240 CIRBPQ14011 172 aaKnown RBP11.79□□□□□ -0.52
PBX1-215ENST00000559240 RHOHQ15669 191 aa11.79□□□□□ -0.52
PBX1-215ENST00000559240 CSNK1G2-AS1Q8NCQ2 148 aa11.79□□□□□ -0.52
PBX1-215ENST00000559240 IGHV1OR15-1A0A075B7D0 117 aa11.78□□□□□ -0.52
PBX1-215ENST00000559240 TRAV26-2A0A0B4J265 109 aa11.78□□□□□ -0.52
PBX1-215ENST00000559240 ATP5G1P05496 136 aa11.78□□□□□ -0.52
PBX1-215ENST00000559240 TRAV12-3A0A0B4J271 114 aa11.78□□□□□ -0.52
PBX1-215ENST00000559240 RBMY1A1P0DJD3 496 aaKnown RBP11.78□□□□□ -0.52
PBX1-215ENST00000559240 RBMY1CP0DJD4 496 aa11.78□□□□□ -0.52
PBX1-215ENST00000559240 P0DMU3 169 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms