RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 YAE1D1Q9NRH1 226 aa11.91□□□□□ -0.5
SPG11-215ENST00000559193 PTPN13Q12923 2485 aa11.91□□□□□ -0.5
SPG11-215ENST00000559193 CENPEQ02224 2701 aa11.9□□□□□ -0.5
SPG11-215ENST00000559193 MYO9AB2RTY4 2548 aa11.9□□□□□ -0.5
SPG11-215ENST00000559193 DGAT2L7PQ6IED9 249 aa11.9□□□□□ -0.5
SPG11-215ENST00000559193 LRRK2Q5S007 2527 aa11.89□□□□□ -0.51
SPG11-215ENST00000559193 TRGV1A0A0A0MS02 117 aa11.89□□□□□ -0.51
SPG11-215ENST00000559193 LINC00694P0DN24 101 aa11.89□□□□□ -0.51
SPG11-215ENST00000559193 Q96MF0 132 aa11.89□□□□□ -0.51
SPG11-215ENST00000559193 IFITM1P13164 125 aa11.89□□□□□ -0.51
SPG11-215ENST00000559193 LINC00242Q5T6M2 205 aa11.89□□□□□ -0.51
SPG11-215ENST00000559193 ZNF462Q96JM2 2506 aa11.88□□□□□ -0.51
SPG11-215ENST00000559193 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
SPG11-215ENST00000559193 TEX49A0A1B0GTD5 131 aa11.88□□□□□ -0.51
SPG11-215ENST00000559193 RPL13AP40429 203 aaKnown RBP11.88□□□□□ -0.51
SPG11-215ENST00000559193 STHQ8IWL8 128 aa11.88□□□□□ -0.51
SPG11-215ENST00000559193 NAV2Q8IVL1 2488 aa11.88□□□□□ -0.51
SPG11-215ENST00000559193 CLEC2BQ92478 149 aa11.88□□□□□ -0.51
SPG11-215ENST00000559193 TEX15Q9BXT5 2789 aa11.88□□□□□ -0.51
SPG11-215ENST00000559193 H7C423 109 aa11.87□□□□□ -0.51
SPG11-215ENST00000559193 NDUFA7O95182 113 aa11.87□□□□□ -0.51
SPG11-215ENST00000559193 HERVK_113P63121 156 aa11.87□□□□□ -0.51
SPG11-215ENST00000559193 COX6CP09669 75 aa11.86□□□□□ -0.51
SPG11-215ENST00000559193 NTM-AS1Q6ZSK4 140 aa11.86□□□□□ -0.51
SPG11-215ENST00000559193 Q9H8V8 135 aa11.86□□□□□ -0.51
SPG11-215ENST00000559193 AKAP9Q99996 3911 aa11.86□□□□□ -0.51
SPG11-215ENST00000559193 TRAV25A0A0B4J276 109 aa11.86□□□□□ -0.51
SPG11-215ENST00000559193 C2orf82Q6UX34 121 aa11.86□□□□□ -0.51
SPG11-215ENST00000559193 Q6ZTI0 123 aa11.86□□□□□ -0.51
SPG11-215ENST00000559193 BBC3Q96PG8 261 aaPredicted RBP11.86□□□□□ -0.51
SPG11-215ENST00000559193 ZFYVE26Q68DK2 2539 aa11.86□□□□□ -0.51
SPG11-215ENST00000559193 ABCA12Q86UK0 2595 aa11.86□□□□□ -0.51
SPG11-215ENST00000559193 K7EQD1 137 aa11.85□□□□□ -0.51
SPG11-215ENST00000559193 FAM19A3Q7Z5A8 133 aa11.85□□□□□ -0.51
SPG11-215ENST00000559193 KRTAP1-3Q8IUG1 177 aa11.85□□□□□ -0.51
SPG11-215ENST00000559193 LRRC75A-AS1Q8N1F1 130 aa11.85□□□□□ -0.51
SPG11-215ENST00000559193 C11orf44Q8N8P7 122 aa11.85□□□□□ -0.51
SPG11-215ENST00000559193 UBE2WQ96B02 151 aa11.85□□□□□ -0.51
SPG11-215ENST00000559193 CITED1Q99966 193 aa11.85□□□□□ -0.51
SPG11-215ENST00000559193 A0A1W2PRX2 142 aa11.85□□□□□ -0.51
SPG11-215ENST00000559193 LST1O00453 97 aa11.85□□□□□ -0.51
SPG11-215ENST00000559193 CITED2Q99967 270 aaPredicted RBP11.85□□□□□ -0.51
SPG11-215ENST00000559193 SMIM1B2RUZ4 78 aa11.84□□□□□ -0.51
SPG11-215ENST00000559193 RPL36AP83881 106 aaKnown RBP11.84□□□□□ -0.51
SPG11-215ENST00000559193 LINC00308Q8TCZ7 52 aa11.84□□□□□ -0.51
SPG11-215ENST00000559193 RPL36ALQ969Q0 106 aaKnown RBP11.84□□□□□ -0.51
SPG11-215ENST00000559193 ZNF625Q96I27 306 aaPredicted RBP11.84□□□□□ -0.51
SPG11-215ENST00000559193 UBR5O95071 2799 aaPredicted RBP11.84□□□□□ -0.51
SPG11-215ENST00000559193 TRAV26-1A0A087WT03 109 aa11.83□□□□□ -0.52
SPG11-215ENST00000559193 TRBV10-1A0A0K0K1A3 114 aa11.83□□□□□ -0.52
SPG11-215ENST00000559193 H3BT86 120 aa11.83□□□□□ -0.52
SPG11-215ENST00000559193 CIRBPQ14011 172 aaKnown RBP11.83□□□□□ -0.52
SPG11-215ENST00000559193 TMEM86BQ8N661 226 aa11.83□□□□□ -0.52
SPG11-215ENST00000559193 CSDC2Q9Y534 153 aaKnown RBP11.83□□□□□ -0.52
SPG11-215ENST00000559193 TRAV13-1A0A0B4J241 112 aa11.83□□□□□ -0.52
SPG11-215ENST00000559193 A0A0U1RRA0 63 aa11.82□□□□□ -0.52
SPG11-215ENST00000559193 DNAJC9-AS1A6NH13 148 aa11.82□□□□□ -0.52
SPG11-215ENST00000559193 DAZ2Q13117 558 aaKnown RBP11.82□□□□□ -0.52
SPG11-215ENST00000559193 DAZ4Q86SG3 579 aaKnown RBP11.82□□□□□ -0.52
SPG11-215ENST00000559193 DAZ3Q9NR90 486 aaKnown RBP11.82□□□□□ -0.52
SPG11-215ENST00000559193 TRAV8-4A0A0B4J246 113 aa11.81□□□□□ -0.52
SPG11-215ENST00000559193 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
SPG11-215ENST00000559193 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
SPG11-215ENST00000559193 GAGE4Q13068 117 aa11.81□□□□□ -0.52
SPG11-215ENST00000559193 GAGE5Q13069 117 aa11.81□□□□□ -0.52
SPG11-215ENST00000559193 SOSTDC1Q6X4U4 206 aa11.81□□□□□ -0.52
SPG11-215ENST00000559193 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
SPG11-215ENST00000559193 CCL24O00175 119 aa11.81□□□□□ -0.52
SPG11-215ENST00000559193 USP24Q9UPU5 2620 aa11.81□□□□□ -0.52
SPG11-215ENST00000559193 ZNF469Q96JG9 3925 aaPredicted RBP11.81□□□□□ -0.52
SPG11-215ENST00000559193 F5H768 121 aa11.8□□□□□ -0.52
SPG11-215ENST00000559193 CDC42SE2Q9NRR3 84 aa11.8□□□□□ -0.52
SPG11-215ENST00000559193 EPG5Q9HCE0 2579 aa11.8□□□□□ -0.52
SPG11-215ENST00000559193 CRLF1O75462 422 aa11.8□□□□□ -0.52
SPG11-215ENST00000559193 TEX29Q8N6K0 151 aa11.79□□□□□ -0.52
SPG11-215ENST00000559193 NOP10Q9NPE3 64 aaKnown RBP11.79□□□□□ -0.52
SPG11-215ENST00000559193 GIG44P09565 113 aaPredicted RBP11.79□□□□□ -0.52
SPG11-215ENST00000559193 TLN2Q9Y4G6 2542 aa11.78□□□□□ -0.52
SPG11-215ENST00000559193 SNCGO76070 127 aa11.78□□□□□ -0.52
SPG11-215ENST00000559193 PRIMA1Q86XR5 153 aa11.78□□□□□ -0.52
SPG11-215ENST00000559193 ZNF843Q8N446 348 aa11.78□□□□□ -0.52
SPG11-215ENST00000559193 ESM1Q9NQ30 184 aa11.78□□□□□ -0.52
SPG11-215ENST00000559193 PLAC8L1A1L4L8 177 aa11.76□□□□□ -0.53
SPG11-215ENST00000559193 MEIG1Q5JSS6 88 aa11.76□□□□□ -0.53
SPG11-215ENST00000559193 WFDC10AQ9H1F0 79 aa11.76□□□□□ -0.53
SPG11-215ENST00000559193 DEFB121Q5J5C9 76 aa11.75□□□□□ -0.53
SPG11-215ENST00000559193 ANAPC13Q9BS18 74 aa11.75□□□□□ -0.53
SPG11-215ENST00000559193 WNK1Q9H4A3 2382 aa11.75□□□□□ -0.53
SPG11-215ENST00000559193 SVIPQ8NHG7 77 aa11.75□□□□□ -0.53
SPG11-215ENST00000559193 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
SPG11-215ENST00000559193 SONP18583 2426 aaKnown RBP11.75□□□□□ -0.53
SPG11-215ENST00000559193 LOC100131303A0A0U1RQF7 123 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 COX7A2LO14548 114 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 GAGE2BQ13066 116 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 GAGE2EQ4V326 116 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 SHISA2Q6UWI4 295 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 C15orf53Q8NAA6 179 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 GAGE2DQ9UEU5 116 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 COPS9Q8WXC6 57 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms