RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 TMEM101Q96IK0 257 aa12.32□□□□□ -0.44
CLPX-203ENST00000558958 OPRPNQ99935 248 aaPredicted RBP12.32□□□□□ -0.44
CLPX-203ENST00000558958 IGLV4-60A0A075B6I1 120 aa12.31□□□□□ -0.44
CLPX-203ENST00000558958 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
CLPX-203ENST00000558958 NPSP0C0P6 89 aa12.31□□□□□ -0.44
CLPX-203ENST00000558958 Q8N976 141 aa12.31□□□□□ -0.44
CLPX-203ENST00000558958 VPS13DQ5THJ4 4388 aa12.3□□□□□ -0.44
CLPX-203ENST00000558958 MRPS36P82909 103 aaKnown RBP12.3□□□□□ -0.44
CLPX-203ENST00000558958 LINC01556Q5JQF7 62 aa12.3□□□□□ -0.44
CLPX-203ENST00000558958 IFI27L1Q96BM0 104 aa12.3□□□□□ -0.44
CLPX-203ENST00000558958 CDC42SE2Q9NRR3 84 aa12.3□□□□□ -0.44
CLPX-203ENST00000558958 SIVA1O15304 175 aa12.29□□□□□ -0.44
CLPX-203ENST00000558958 DNAH10OSP0CZ25 163 aa12.29□□□□□ -0.44
CLPX-203ENST00000558958 Q6ZUT4 128 aa12.29□□□□□ -0.44
CLPX-203ENST00000558958 ZNF664Q8N3J9 261 aa12.29□□□□□ -0.44
CLPX-203ENST00000558958 IGHV3-30P01768 117 aa12.28□□□□□ -0.44
CLPX-203ENST00000558958 IGHV3-33P01772 117 aa12.28□□□□□ -0.44
CLPX-203ENST00000558958 IGHV3-30-3P0DP02 117 aa12.28□□□□□ -0.44
CLPX-203ENST00000558958 IGHV3-30-5P0DP03 117 aa12.28□□□□□ -0.44
CLPX-203ENST00000558958 Q9H8V8 135 aa12.28□□□□□ -0.44
CLPX-203ENST00000558958 PAPPA-AS1Q5QFB9 102 aa12.27□□□□□ -0.44
CLPX-203ENST00000558958 Q6ZN92 141 aa12.27□□□□□ -0.44
CLPX-203ENST00000558958 BAALCQ8WXS3 180 aa12.27□□□□□ -0.44
CLPX-203ENST00000558958 DNAH1Q9P2D7 4330 aa12.27□□□□□ -0.44
CLPX-203ENST00000558958 RNASE13Q5GAN3 156 aaKnown RBP12.27□□□□□ -0.45
CLPX-203ENST00000558958 LGALS9CQ6DKI2 356 aa12.27□□□□□ -0.45
CLPX-203ENST00000558958 AMELXQ99217 191 aa12.27□□□□□ -0.45
CLPX-203ENST00000558958 VCX2Q9H322 139 aa12.27□□□□□ -0.45
CLPX-203ENST00000558958 ANGP03950 147 aaKnown RBP12.26□□□□□ -0.45
CLPX-203ENST00000558958 ZC2HC1BQ5TFG8 222 aa12.26□□□□□ -0.45
CLPX-203ENST00000558958 MAP1LC3CQ9BXW4 147 aa12.26□□□□□ -0.45
CLPX-203ENST00000558958 PRSS1P07477 247 aa12.25□□□□□ -0.45
CLPX-203ENST00000558958 C3orf79P0CE67 100 aa12.25□□□□□ -0.45
CLPX-203ENST00000558958 TEX43Q6ZNM6 134 aa12.25□□□□□ -0.45
CLPX-203ENST00000558958 PMVKQ15126 192 aa12.24□□□□□ -0.45
CLPX-203ENST00000558958 LINC00269Q8N2A0 174 aa12.24□□□□□ -0.45
CLPX-203ENST00000558958 CST9LQ9H4G1 147 aa12.24□□□□□ -0.45
CLPX-203ENST00000558958 KLK12Q9UKR0 248 aa12.24□□□□□ -0.45
CLPX-203ENST00000558958 ALMS1Q8TCU4 4167 aa12.24□□□□□ -0.45
CLPX-203ENST00000558958 KRTDAPP60985 99 aa12.23□□□□□ -0.45
CLPX-203ENST00000558958 OR10D4PQ8NGN7 298 aa12.23□□□□□ -0.45
CLPX-203ENST00000558958 TRAV12-1A0A0B4J245 112 aa12.22□□□□□ -0.45
CLPX-203ENST00000558958 PRSS29PA6NIE9 313 aa12.22□□□□□ -0.45
CLPX-203ENST00000558958 H0Y8G0 127 aa12.22□□□□□ -0.45
CLPX-203ENST00000558958 SYS1-DBNDD2H3BUS1 97 aa12.22□□□□□ -0.45
CLPX-203ENST00000558958 SPATA12Q7Z6I5 190 aa12.22□□□□□ -0.45
CLPX-203ENST00000558958 PRR34Q9NV39 138 aa12.22□□□□□ -0.45
CLPX-203ENST00000558958 K7EP13 123 aa12.21□□□□□ -0.46
CLPX-203ENST00000558958 REG3AQ06141 175 aa12.21□□□□□ -0.46
CLPX-203ENST00000558958 CLPSL2Q6UWE3 100 aa12.21□□□□□ -0.46
CLPX-203ENST00000558958 LINC00476Q8WZB0 136 aa12.21□□□□□ -0.46
CLPX-203ENST00000558958 C2orf88Q9BSF0 95 aa12.21□□□□□ -0.46
CLPX-203ENST00000558958 TRAV9-2A0A087WT02 112 aa12.2□□□□□ -0.46
CLPX-203ENST00000558958 IGKV3OR2-268A0A0C4DH90 116 aa12.2□□□□□ -0.46
CLPX-203ENST00000558958 PET117Q6UWS5 81 aa12.2□□□□□ -0.46
CLPX-203ENST00000558958 ENHOQ6UWT2 76 aa12.2□□□□□ -0.46
CLPX-203ENST00000558958 C10orf126Q8N4M7 172 aa12.2□□□□□ -0.46
CLPX-203ENST00000558958 TRAV13-1A0A0B4J241 112 aa12.19□□□□□ -0.46
CLPX-203ENST00000558958 UBE2D1P51668 147 aa12.19□□□□□ -0.46
CLPX-203ENST00000558958 ODF1Q14990 250 aa12.19□□□□□ -0.46
CLPX-203ENST00000558958 LINC00959A0A1B0GUT2 108 aa12.18□□□□□ -0.46
CLPX-203ENST00000558958 IBA57-AS1B1ANH7 110 aa12.18□□□□□ -0.46
CLPX-203ENST00000558958 LY6G6CO95867 125 aa12.18□□□□□ -0.46
CLPX-203ENST00000558958 UBE2WQ96B02 151 aa12.18□□□□□ -0.46
CLPX-203ENST00000558958 CHTOPQ9Y3Y2 248 aaKnown RBP12.18□□□□□ -0.46
CLPX-203ENST00000558958 DNAH6Q9C0G6 4158 aa12.17□□□□□ -0.46
CLPX-203ENST00000558958 CRPP02741 224 aa12.17□□□□□ -0.46
CLPX-203ENST00000558958 LINC01545Q5VT33 79 aa12.17□□□□□ -0.46
CLPX-203ENST00000558958 KRTAP1-5Q9BYS1 174 aa12.17□□□□□ -0.46
CLPX-203ENST00000558958 LOC105371267A0A1B0GV96 52 aa12.16□□□□□ -0.46
CLPX-203ENST00000558958 FAM19A3Q7Z5A8 133 aa12.16□□□□□ -0.46
CLPX-203ENST00000558958 MRPL35Q9NZE8 188 aaKnown RBP12.16□□□□□ -0.46
CLPX-203ENST00000558958 KMT2AQ03164 3969 aa12.16□□□□□ -0.46
CLPX-203ENST00000558958 IGLV4-69A0A075B6H9 119 aa12.15□□□□□ -0.46
CLPX-203ENST00000558958 A0A0J9YXV3 536 aa12.15□□□□□ -0.46
CLPX-203ENST00000558958 NBDYA0A0U1RRE5 68 aa12.15□□□□□ -0.46
CLPX-203ENST00000558958 F8VRH5 84 aa12.15□□□□□ -0.46
CLPX-203ENST00000558958 CCL25O15444 150 aa12.15□□□□□ -0.46
CLPX-203ENST00000558958 MIAQ16674 131 aa12.15□□□□□ -0.46
CLPX-203ENST00000558958 PMCHL2Q9BQD1 86 aa12.15□□□□□ -0.46
CLPX-203ENST00000558958 SS18Q15532 418 aa12.14□□□□□ -0.47
CLPX-203ENST00000558958 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
CLPX-203ENST00000558958 LINC00242Q5T6M2 205 aa12.14□□□□□ -0.47
CLPX-203ENST00000558958 TRAV8-3A0A0A6YYJ7 113 aa12.14□□□□□ -0.47
CLPX-203ENST00000558958 TRAV8-4A0A0B4J246 113 aa12.14□□□□□ -0.47
CLPX-203ENST00000558958 C20orf202A1L168 122 aa12.14□□□□□ -0.47
CLPX-203ENST00000558958 IGLC3P0DOY3 106 aa12.14□□□□□ -0.47
CLPX-203ENST00000558958 IGLV10-54A0A075B6I4 117 aa12.13□□□□□ -0.47
CLPX-203ENST00000558958 TINCRA0A1B0GVN0 87 aa12.13□□□□□ -0.47
CLPX-203ENST00000558958 AKR1D1P51857 326 aa12.13□□□□□ -0.47
CLPX-203ENST00000558958 NFE4Q86UQ8 179 aa12.13□□□□□ -0.47
CLPX-203ENST00000558958 SEC11AP67812 179 aa12.12□□□□□ -0.47
CLPX-203ENST00000558958 CHCHD10Q8WYQ3 142 aaPredicted RBP12.12□□□□□ -0.47
CLPX-203ENST00000558958 C11orf86A6NJI1 115 aa12.11□□□□□ -0.47
CLPX-203ENST00000558958 DPM2O94777 84 aa12.11□□□□□ -0.47
CLPX-203ENST00000558958 SCGB1D1O95968 90 aa12.11□□□□□ -0.47
CLPX-203ENST00000558958 PLNP26678 52 aa12.11□□□□□ -0.47
CLPX-203ENST00000558958 COX6A2Q02221 97 aa12.11□□□□□ -0.47
CLPX-203ENST00000558958 JOSD1Q15040 202 aaPredicted RBP12.11□□□□□ -0.47
CLPX-203ENST00000558958 CHAC1Q9BUX1 264 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 1227 ms