RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.1
SMAD3-205ENST00000558428 LOC389332A0A1B0GUA5 103 aa8.15□□□□□ -1.1
SMAD3-205ENST00000558428 SMAGPQ0VAQ4 97 aa8.15□□□□□ -1.1
SMAD3-205ENST00000558428 DGAT2L7PQ6IED9 249 aa8.15□□□□□ -1.1
SMAD3-205ENST00000558428 KRTAP26-1Q6PEX3 210 aa8.15□□□□□ -1.1
SMAD3-205ENST00000558428 MRPL52Q86TS9 123 aaKnown RBP8.15□□□□□ -1.1
SMAD3-205ENST00000558428 NTN5Q8WTR8 489 aaPredicted RBP8.15□□□□□ -1.1
SMAD3-205ENST00000558428 TMEM18Q96B42 140 aa8.15□□□□□ -1.1
SMAD3-205ENST00000558428 MAP1LC3AQ9H492 121 aa8.15□□□□□ -1.1
SMAD3-205ENST00000558428 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-205ENST00000558428 RAB5AP20339 215 aa8.14□□□□□ -1.11
SMAD3-205ENST00000558428 KIAA1644Q3SXP7 199 aa8.14□□□□□ -1.11
SMAD3-205ENST00000558428 COX19Q49B96 90 aa8.14□□□□□ -1.11
SMAD3-205ENST00000558428 GNB1LQ9BYB4 327 aa8.14□□□□□ -1.11
SMAD3-205ENST00000558428 PRSS47A8MTI9 375 aa8.13□□□□□ -1.11
SMAD3-205ENST00000558428 USP17L23D6RBM5 183 aa8.13□□□□□ -1.11
SMAD3-205ENST00000558428 C14orf177Q52M58 125 aa8.13□□□□□ -1.11
SMAD3-205ENST00000558428 SLC7A5P1Q8MH63 180 aa8.13□□□□□ -1.11
SMAD3-205ENST00000558428 CDC42SE2Q9NRR3 84 aa8.13□□□□□ -1.11
SMAD3-205ENST00000558428 UBE2D4Q9Y2X8 147 aa8.13□□□□□ -1.11
SMAD3-205ENST00000558428 TGIF2-C20orf24A0A0A6YYL0 155 aa8.12□□□□□ -1.11
SMAD3-205ENST00000558428 GCSHP23434 173 aa8.12□□□□□ -1.11
SMAD3-205ENST00000558428 RPL39P62891 51 aaKnown RBP8.12□□□□□ -1.11
SMAD3-205ENST00000558428 ZNF664Q8N3J9 261 aa8.12□□□□□ -1.11
SMAD3-205ENST00000558428 Q8N8P6 123 aa8.12□□□□□ -1.11
SMAD3-205ENST00000558428 CSDC2Q9Y534 153 aaKnown RBP8.12□□□□□ -1.11
SMAD3-205ENST00000558428 GAGE12HA6NDE8 117 aa8.11□□□□□ -1.11
SMAD3-205ENST00000558428 MT-ND6P03923 174 aa8.11□□□□□ -1.11
SMAD3-205ENST00000558428 CHCHD10Q8WYQ3 142 aaPredicted RBP8.11□□□□□ -1.11
SMAD3-205ENST00000558428 TIMM21Q9BVV7 248 aa8.11□□□□□ -1.11
SMAD3-205ENST00000558428 MRPL18Q9H0U6 180 aaKnown RBP8.11□□□□□ -1.11
SMAD3-205ENST00000558428 HSPG2P98160 4391 aa8.11□□□□□ -1.11
SMAD3-205ENST00000558428 DNAH8Q96JB1 4490 aa8.1□□□□□ -1.11
SMAD3-205ENST00000558428 LINC00959A0A1B0GUT2 108 aa8.1□□□□□ -1.11
SMAD3-205ENST00000558428 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
SMAD3-205ENST00000558428 FABP9Q0Z7S8 132 aa8.1□□□□□ -1.11
SMAD3-205ENST00000558428 RNASE13Q5GAN3 156 aaKnown RBP8.1□□□□□ -1.11
SMAD3-205ENST00000558428 Q6ZUT4 128 aa8.1□□□□□ -1.11
SMAD3-205ENST00000558428 NXT2Q9NPJ8 142 aaKnown RBP8.1□□□□□ -1.11
SMAD3-205ENST00000558428 CDK2AP2O75956 126 aa8.09□□□□□ -1.11
SMAD3-205ENST00000558428 IFI27P40305 119 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-205ENST00000558428 XCL1P47992 114 aa8.09□□□□□ -1.11
SMAD3-205ENST00000558428 SS18Q15532 418 aa8.09□□□□□ -1.11
SMAD3-205ENST00000558428 SPANXA1Q9NS26 97 aa8.09□□□□□ -1.11
SMAD3-205ENST00000558428 CCL25O15444 150 aa8.08□□□□□ -1.12
SMAD3-205ENST00000558428 PRSS1P07477 247 aa8.08□□□□□ -1.12
SMAD3-205ENST00000558428 ORMDL2Q53FV1 153 aa8.08□□□□□ -1.12
SMAD3-205ENST00000558428 ALKBH7Q9BT30 221 aaPredicted RBP8.08□□□□□ -1.12
SMAD3-205ENST00000558428 TRAPPC1Q9Y5R8 145 aa8.08□□□□□ -1.12
SMAD3-205ENST00000558428 TRAV13-1A0A0B4J241 112 aa8.07□□□□□ -1.12
SMAD3-205ENST00000558428 K7EMI3 77 aa8.07□□□□□ -1.12
SMAD3-205ENST00000558428 FOXI1Q12951 378 aa8.07□□□□□ -1.12
SMAD3-205ENST00000558428 PRSS3P2Q8NHM4 247 aa8.07□□□□□ -1.12
SMAD3-205ENST00000558428 OPRPNQ99935 248 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-205ENST00000558428 hDV102S1A0JD36 115 aa8.06□□□□□ -1.12
SMAD3-205ENST00000558428 C1orf196B1AJZ1 125 aa8.06□□□□□ -1.12
SMAD3-205ENST00000558428 MRPS36P82909 103 aaKnown RBP8.06□□□□□ -1.12
SMAD3-205ENST00000558428 LINC01620Q4KN68 170 aa8.06□□□□□ -1.12
SMAD3-205ENST00000558428 CFAP161Q6P656 301 aa8.06□□□□□ -1.12
SMAD3-205ENST00000558428 C2orf66Q6UXQ4 117 aa8.06□□□□□ -1.12
SMAD3-205ENST00000558428 FAM104AQ969W3 186 aa8.06□□□□□ -1.12
SMAD3-205ENST00000558428 CYSLTR1Q9Y271 337 aa8.06□□□□□ -1.12
SMAD3-205ENST00000558428 CD164L2Q6UWJ8 174 aa8.05□□□□□ -1.12
SMAD3-205ENST00000558428 CBLN2Q8IUK8 224 aa8.05□□□□□ -1.12
SMAD3-205ENST00000558428 C15orf56Q8N910 161 aa8.05□□□□□ -1.12
SMAD3-205ENST00000558428 YPEL4Q96NS1 127 aa8.05□□□□□ -1.12
SMAD3-205ENST00000558428 SMCO4Q9NRQ5 59 aa8.05□□□□□ -1.12
SMAD3-205ENST00000558428 PYGO1Q9Y3Y4 419 aa8.05□□□□□ -1.12
SMAD3-205ENST00000558428 IGLV4-3A0A075B6K6 122 aa8.04□□□□□ -1.12
SMAD3-205ENST00000558428 IFITM10A6NMD0 228 aa8.04□□□□□ -1.12
SMAD3-205ENST00000558428 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
SMAD3-205ENST00000558428 G0S2P27469 103 aa8.03□□□□□ -1.12
SMAD3-205ENST00000558428 HIGD2BQ4VC39 106 aa8.03□□□□□ -1.12
SMAD3-205ENST00000558428 FA2HQ7L5A8 372 aa8.03□□□□□ -1.12
SMAD3-205ENST00000558428 TMEM141Q96I45 108 aa8.03□□□□□ -1.12
SMAD3-205ENST00000558428 IGHV1-58A0A0C4DH39 117 aa8.02□□□□□ -1.13
SMAD3-205ENST00000558428 XGP55808 180 aa8.02□□□□□ -1.13
SMAD3-205ENST00000558428 Q6ZN92 141 aa8.02□□□□□ -1.13
SMAD3-205ENST00000558428 TEX43Q6ZNM6 134 aa8.02□□□□□ -1.13
SMAD3-205ENST00000558428 FAM30AQ9NZY2 134 aa8.02□□□□□ -1.13
SMAD3-205ENST00000558428 LINC01546A6NGU7 62 aa8.01□□□□□ -1.13
SMAD3-205ENST00000558428 COX7A2LO14548 114 aa8.01□□□□□ -1.13
SMAD3-205ENST00000558428 MALP21145 153 aa8.01□□□□□ -1.13
SMAD3-205ENST00000558428 CNBPP62633 177 aaKnown RBP8.01□□□□□ -1.13
SMAD3-205ENST00000558428 HAMPP81172 84 aa8.01□□□□□ -1.13
SMAD3-205ENST00000558428 C18orf32Q8TCD1 76 aa8.01□□□□□ -1.13
SMAD3-205ENST00000558428 TOMM6Q96B49 74 aa8.01□□□□□ -1.13
SMAD3-205ENST00000558428 GVQW2A0A096LPI5 108 aaPredicted RBP8□□□□□ -1.13
SMAD3-205ENST00000558428 TRAV16A0A0A6YYK6 109 aaPredicted RBP8□□□□□ -1.13
SMAD3-205ENST00000558428 IGIPA6NJ69 53 aa8□□□□□ -1.13
SMAD3-205ENST00000558428 NPSP0C0P6 89 aa8□□□□□ -1.13
SMAD3-205ENST00000558428 C5orf38Q86SI9 138 aa8□□□□□ -1.13
SMAD3-205ENST00000558428 C9orf163Q8N9P6 203 aa8□□□□□ -1.13
SMAD3-205ENST00000558428 C2orf88Q9BSF0 95 aa8□□□□□ -1.13
SMAD3-205ENST00000558428 VCX2Q9H322 139 aa8□□□□□ -1.13
SMAD3-205ENST00000558428 SLPIP03973 132 aa7.99□□□□□ -1.13
SMAD3-205ENST00000558428 ZC2HC1BQ5TFG8 222 aa7.99□□□□□ -1.13
SMAD3-205ENST00000558428 Q6ZSA8 131 aa7.99□□□□□ -1.13
SMAD3-205ENST00000558428 SCGB3A1Q96QR1 104 aa7.99□□□□□ -1.13
SMAD3-205ENST00000558428 AMELXQ99217 191 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms