RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PYGO1Q9Y3Y4 419 aa9.13□□□□□ -0.95
SHMT2-234ENST00000557703 DNAH17Q9UFH2 4485 aa9.13□□□□□ -0.95
SHMT2-234ENST00000557703 A0A087WTM6 91 aa9.12□□□□□ -0.95
SHMT2-234ENST00000557703 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
SHMT2-234ENST00000557703 ZNF664Q8N3J9 261 aa9.12□□□□□ -0.95
SHMT2-234ENST00000557703 MRPS36P82909 103 aaKnown RBP9.11□□□□□ -0.95
SHMT2-234ENST00000557703 PRSS3P2Q8NHM4 247 aa9.11□□□□□ -0.95
SHMT2-234ENST00000557703 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-234ENST00000557703 UBE2D4Q9Y2X8 147 aa9.11□□□□□ -0.95
SHMT2-234ENST00000557703 FAT2Q9NYQ8 4349 aa9.1□□□□□ -0.95
SHMT2-234ENST00000557703 LOC389332A0A1B0GUA5 103 aa9.1□□□□□ -0.95
SHMT2-234ENST00000557703 LRCOL1A6NCL2 159 aa9.1□□□□□ -0.95
SHMT2-234ENST00000557703 LINC01546A6NGU7 62 aa9.1□□□□□ -0.95
SHMT2-234ENST00000557703 KIAA1644Q3SXP7 199 aa9.1□□□□□ -0.95
SHMT2-234ENST00000557703 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
SHMT2-234ENST00000557703 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
SHMT2-234ENST00000557703 EPPK1P58107 5090 aaKnown RBP9.1□□□□□ -0.95
SHMT2-234ENST00000557703 BIRC6Q9NR09 4857 aa9.1□□□□□ -0.95
SHMT2-234ENST00000557703 IFI27P40305 119 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-234ENST00000557703 RAB5BP61020 215 aa9.09□□□□□ -0.95
SHMT2-234ENST00000557703 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
SHMT2-234ENST00000557703 C1orf196B1AJZ1 125 aa9.08□□□□□ -0.96
SHMT2-234ENST00000557703 SS18Q15532 418 aa9.08□□□□□ -0.96
SHMT2-234ENST00000557703 HECTD4Q9Y4D8 3996 aa9.07□□□□□ -0.96
SHMT2-234ENST00000557703 CFAP161Q6P656 301 aa9.07□□□□□ -0.96
SHMT2-234ENST00000557703 CBLN2Q8IUK8 224 aa9.07□□□□□ -0.96
SHMT2-234ENST00000557703 LINC00959A0A1B0GUT2 108 aa9.06□□□□□ -0.96
SHMT2-234ENST00000557703 KRTAP26-1Q6PEX3 210 aa9.06□□□□□ -0.96
SHMT2-234ENST00000557703 C2orf66Q6UXQ4 117 aa9.06□□□□□ -0.96
SHMT2-234ENST00000557703 FA2HQ7L5A8 372 aa9.06□□□□□ -0.96
SHMT2-234ENST00000557703 Q8N814 137 aa9.06□□□□□ -0.96
SHMT2-234ENST00000557703 AP5S1Q9NUS5 200 aa9.06□□□□□ -0.96
SHMT2-234ENST00000557703 S100A1P23297 94 aa9.05□□□□□ -0.96
SHMT2-234ENST00000557703 RPL39P62891 51 aaKnown RBP9.05□□□□□ -0.96
SHMT2-234ENST00000557703 CLPSL2Q6UWE3 100 aa9.05□□□□□ -0.96
SHMT2-234ENST00000557703 Q6ZN92 141 aa9.05□□□□□ -0.96
SHMT2-234ENST00000557703 SPATA12Q7Z6I5 190 aa9.05□□□□□ -0.96
SHMT2-234ENST00000557703 MAPKAPK5-AS1Q8N8E1 139 aa9.05□□□□□ -0.96
SHMT2-234ENST00000557703 TOMM6Q96B49 74 aa9.05□□□□□ -0.96
SHMT2-234ENST00000557703 TIMM17AQ99595 171 aa9.05□□□□□ -0.96
SHMT2-234ENST00000557703 LINC00614P0C842 121 aa9.04□□□□□ -0.96
SHMT2-234ENST00000557703 CD164L2Q6UWJ8 174 aa9.04□□□□□ -0.96
SHMT2-234ENST00000557703 C18orf32Q8TCD1 76 aa9.04□□□□□ -0.96
SHMT2-234ENST00000557703 CHCHD10Q8WYQ3 142 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-234ENST00000557703 TMEM141Q96I45 108 aa9.04□□□□□ -0.96
SHMT2-234ENST00000557703 COLCA2A8K830 154 aa9.03□□□□□ -0.96
SHMT2-234ENST00000557703 ERASQ7Z444 233 aa9.03□□□□□ -0.96
SHMT2-234ENST00000557703 BAALCQ8WXS3 180 aa9.03□□□□□ -0.96
SHMT2-234ENST00000557703 PKD1P98161 4303 aa9.02□□□□□ -0.96
SHMT2-234ENST00000557703 IGLV10-54A0A075B6I4 117 aa9.02□□□□□ -0.97
SHMT2-234ENST00000557703 IGIPA6NJ69 53 aa9.02□□□□□ -0.97
SHMT2-234ENST00000557703 TEX43Q6ZNM6 134 aa9.02□□□□□ -0.97
SHMT2-234ENST00000557703 C2orf88Q9BSF0 95 aa9.02□□□□□ -0.97
SHMT2-234ENST00000557703 KRTAP17-1Q9BYP8 105 aa9.02□□□□□ -0.97
SHMT2-234ENST00000557703 VCX2Q9H322 139 aa9.02□□□□□ -0.97
SHMT2-234ENST00000557703 IGKV3OR2-268A0A0C4DH90 116 aa9.01□□□□□ -0.97
SHMT2-234ENST00000557703 C16orf90A8MZG2 172 aa9.01□□□□□ -0.97
SHMT2-234ENST00000557703 USP17L23D6RBM5 183 aa9.01□□□□□ -0.97
SHMT2-234ENST00000557703 SEC11AP67812 179 aa9.01□□□□□ -0.97
SHMT2-234ENST00000557703 Q6ZUT4 128 aa9.01□□□□□ -0.97
SHMT2-234ENST00000557703 CHCHD1Q96BP2 118 aaKnown RBP9.01□□□□□ -0.97
SHMT2-234ENST00000557703 PKHD1P08F94 4074 aa9□□□□□ -0.97
SHMT2-234ENST00000557703 IGLV4-3A0A075B6K6 122 aa9□□□□□ -0.97
SHMT2-234ENST00000557703 GAGE12HA6NDE8 117 aa9□□□□□ -0.97
SHMT2-234ENST00000557703 KRTAP10-2P60368 255 aa9□□□□□ -0.97
SHMT2-234ENST00000557703 FAM104AQ969W3 186 aa9□□□□□ -0.97
SHMT2-234ENST00000557703 AMELXQ99217 191 aa9□□□□□ -0.97
SHMT2-234ENST00000557703 IGLV5-52A0A0A0MRZ9 124 aa8.99□□□□□ -0.97
SHMT2-234ENST00000557703 TRAV13-1A0A0B4J241 112 aa8.99□□□□□ -0.97
SHMT2-234ENST00000557703 IFITM10A6NMD0 228 aa8.99□□□□□ -0.97
SHMT2-234ENST00000557703 TRGC2P03986 189 aa8.99□□□□□ -0.97
SHMT2-234ENST00000557703 XCL1P47992 114 aa8.99□□□□□ -0.97
SHMT2-234ENST00000557703 FOXI1Q12951 378 aa8.99□□□□□ -0.97
SHMT2-234ENST00000557703 SCGB3A1Q96QR1 104 aa8.99□□□□□ -0.97
SHMT2-234ENST00000557703 IGHV1-58A0A0C4DH39 117 aa8.98□□□□□ -0.97
SHMT2-234ENST00000557703 COX7A2LO14548 114 aa8.98□□□□□ -0.97
SHMT2-234ENST00000557703 APOMO95445 188 aa8.98□□□□□ -0.97
SHMT2-234ENST00000557703 GCSHP23434 173 aa8.98□□□□□ -0.97
SHMT2-234ENST00000557703 FAM19A3Q7Z5A8 133 aa8.98□□□□□ -0.97
SHMT2-234ENST00000557703 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-234ENST00000557703 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-234ENST00000557703 HBDP02042 147 aa8.97□□□□□ -0.97
SHMT2-234ENST00000557703 CNBPP62633 177 aaKnown RBP8.97□□□□□ -0.97
SHMT2-234ENST00000557703 WFDC2Q14508 124 aa8.97□□□□□ -0.97
SHMT2-234ENST00000557703 LINC01561Q8N1V8 128 aa8.97□□□□□ -0.97
SHMT2-234ENST00000557703 GVQW2A0A096LPI5 108 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-234ENST00000557703 IGHV3OR16-9A0A0B4J2B5 98 aa8.96□□□□□ -0.98
SHMT2-234ENST00000557703 F8WDY8 70 aa8.96□□□□□ -0.98
SHMT2-234ENST00000557703 LECT2O14960 151 aa8.96□□□□□ -0.98
SHMT2-234ENST00000557703 ATP5LO75964 103 aa8.96□□□□□ -0.98
SHMT2-234ENST00000557703 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
SHMT2-234ENST00000557703 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
SHMT2-234ENST00000557703 CDK2AP2O75956 126 aa8.95□□□□□ -0.98
SHMT2-234ENST00000557703 PRSS1P07477 247 aa8.95□□□□□ -0.98
SHMT2-234ENST00000557703 MALP21145 153 aa8.95□□□□□ -0.98
SHMT2-234ENST00000557703 UBE2D1P51668 147 aa8.95□□□□□ -0.98
SHMT2-234ENST00000557703 HERVK_113P63121 156 aa8.95□□□□□ -0.98
SHMT2-234ENST00000557703 RNASE13Q5GAN3 156 aaKnown RBP8.95□□□□□ -0.98
SHMT2-234ENST00000557703 URB1-AS1Q96HZ7 61 aa8.95□□□□□ -0.98
SHMT2-234ENST00000557703 OPRPNQ99935 248 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms