RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-211	ENST00000557446	KRTAP17-1	Q9BYP8	105 aa		12.9	□□□□□ -0.34
HIF1A-211	ENST00000557446	GAGE12H	A6NDE8	117 aa		12.89	□□□□□ -0.35
HIF1A-211	ENST00000557446	TCAP	O15273	167 aa		12.89	□□□□□ -0.35
HIF1A-211	ENST00000557446	PRSS1	P07477	247 aa		12.89	□□□□□ -0.35
HIF1A-211	ENST00000557446	DGAT2L7P	Q6IED9	249 aa		12.89	□□□□□ -0.35
HIF1A-211	ENST00000557446	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	12.89	□□□□□ -0.35
HIF1A-211	ENST00000557446	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.89	□□□□□ -0.35
HIF1A-211	ENST00000557446	UBE2D4	Q9Y2X8	147 aa		12.89	□□□□□ -0.35
HIF1A-211	ENST00000557446	HAMP	P81172	84 aa		12.88	□□□□□ -0.35
HIF1A-211	ENST00000557446	SMAGP	Q0VAQ4	97 aa		12.88	□□□□□ -0.35
HIF1A-211	ENST00000557446	C10orf91	Q5T1B1	145 aa		12.88	□□□□□ -0.35
HIF1A-211	ENST00000557446	TMEM18	Q96B42	140 aa		12.88	□□□□□ -0.35
HIF1A-211	ENST00000557446	CDC42SE2	Q9NRR3	84 aa		12.88	□□□□□ -0.35
HIF1A-211	ENST00000557446		Q8N1X5	172 aa		12.87	□□□□□ -0.35
HIF1A-211	ENST00000557446	FAM30A	Q9NZY2	134 aa		12.87	□□□□□ -0.35
HIF1A-211	ENST00000557446	LAMTOR2	Q9Y2Q5	125 aa		12.87	□□□□□ -0.35
HIF1A-211	ENST00000557446	TRAV9-1	A0A075B6T8	112 aa		12.86	□□□□□ -0.35
HIF1A-211	ENST00000557446	LINC00959	A0A1B0GUT2	108 aa		12.86	□□□□□ -0.35
HIF1A-211	ENST00000557446	ZNF664	Q8N3J9	261 aa		12.86	□□□□□ -0.35
HIF1A-211	ENST00000557446	CLRN3	Q8NCR9	226 aa		12.86	□□□□□ -0.35
HIF1A-211	ENST00000557446	KRTAP4-5	Q9BYR2	181 aa		12.86	□□□□□ -0.35
HIF1A-211	ENST00000557446	CSDC2	Q9Y534	153 aa	Known RBP	12.86	□□□□□ -0.35
HIF1A-211	ENST00000557446	S100P	P25815	95 aa		12.85	□□□□□ -0.35
HIF1A-211	ENST00000557446	MAP1LC3A	Q9H492	121 aa		12.85	□□□□□ -0.35
HIF1A-211	ENST00000557446	hDV102S1	A0JD36	115 aa		12.84	□□□□□ -0.35
HIF1A-211	ENST00000557446	CCL25	O15444	150 aa		12.84	□□□□□ -0.35
HIF1A-211	ENST00000557446	XCL1	P47992	114 aa		12.84	□□□□□ -0.35
HIF1A-211	ENST00000557446	RPL39	P62891	51 aa	Known RBP	12.84	□□□□□ -0.35
HIF1A-211	ENST00000557446	RHEB	Q15382	184 aa		12.84	□□□□□ -0.35
HIF1A-211	ENST00000557446		Q6ZSA8	131 aa		12.84	□□□□□ -0.35
HIF1A-211	ENST00000557446	TIMM21	Q9BVV7	248 aa		12.84	□□□□□ -0.35
HIF1A-211	ENST00000557446	LOC389332	A0A1B0GUA5	103 aa		12.83	□□□□□ -0.36
HIF1A-211	ENST00000557446	RAB5A	P20339	215 aa		12.83	□□□□□ -0.36
HIF1A-211	ENST00000557446	FOXI1	Q12951	378 aa		12.83	□□□□□ -0.36
HIF1A-211	ENST00000557446	SS18	Q15532	418 aa		12.83	□□□□□ -0.36
HIF1A-211	ENST00000557446	RNASE13	Q5GAN3	156 aa	Known RBP	12.83	□□□□□ -0.36
HIF1A-211	ENST00000557446		Q6ZUT4	128 aa		12.83	□□□□□ -0.36
HIF1A-211	ENST00000557446	C15orf56	Q8N910	161 aa		12.83	□□□□□ -0.36
HIF1A-211	ENST00000557446	RPS10P5	Q9NQ39	176 aa		12.83	□□□□□ -0.36
HIF1A-211	ENST00000557446	PRSS47	A8MTI9	375 aa		12.82	□□□□□ -0.36
HIF1A-211	ENST00000557446	AP5S1	Q9NUS5	200 aa		12.82	□□□□□ -0.36
HIF1A-211	ENST00000557446	CFAP161	Q6P656	301 aa		12.81	□□□□□ -0.36
HIF1A-211	ENST00000557446	SPANXA1	Q9NS26	97 aa		12.8	□□□□□ -0.36
HIF1A-211	ENST00000557446	CNBP	P62633	177 aa	Known RBP	12.79	□□□□□ -0.36
HIF1A-211	ENST00000557446	KIAA1644	Q3SXP7	199 aa		12.79	□□□□□ -0.36
HIF1A-211	ENST00000557446	HIGD2B	Q4VC39	106 aa		12.79	□□□□□ -0.36
HIF1A-211	ENST00000557446		Q8N8P6	123 aa		12.79	□□□□□ -0.36
HIF1A-211	ENST00000557446	C9orf163	Q8N9P6	203 aa		12.79	□□□□□ -0.36
HIF1A-211	ENST00000557446	TRAV13-1	A0A0B4J241	112 aa		12.78	□□□□□ -0.36
HIF1A-211	ENST00000557446	APOC3	P02656	99 aa		12.78	□□□□□ -0.36
HIF1A-211	ENST00000557446	SMR3B	P02814	79 aa	Predicted RBP	12.78	□□□□□ -0.36
HIF1A-211	ENST00000557446	NDUFA5	Q16718	116 aa		12.78	□□□□□ -0.36
HIF1A-211	ENST00000557446	CD164L2	Q6UWJ8	174 aa		12.78	□□□□□ -0.36
HIF1A-211	ENST00000557446	EPM2A	B3EWF7	344 aa		12.77	□□□□□ -0.37
HIF1A-211	ENST00000557446	GNB1L	Q9BYB4	327 aa		12.77	□□□□□ -0.37
HIF1A-211	ENST00000557446	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	12.76	□□□□□ -0.37
HIF1A-211	ENST00000557446	C1orf196	B1AJZ1	125 aa		12.76	□□□□□ -0.37
HIF1A-211	ENST00000557446	IFI27	P40305	119 aa	Predicted RBP	12.76	□□□□□ -0.37
HIF1A-211	ENST00000557446		Q5VSD8	79 aa		12.76	□□□□□ -0.37
HIF1A-211	ENST00000557446	FAM104A	Q969W3	186 aa		12.76	□□□□□ -0.37
HIF1A-211	ENST00000557446	GVQW2	A0A096LPI5	108 aa	Predicted RBP	12.75	□□□□□ -0.37
HIF1A-211	ENST00000557446	SNAPIN	O95295	136 aa		12.75	□□□□□ -0.37
HIF1A-211	ENST00000557446	SLPI	P03973	132 aa		12.75	□□□□□ -0.37
HIF1A-211	ENST00000557446	MRPS36	P82909	103 aa	Known RBP	12.75	□□□□□ -0.37
HIF1A-211	ENST00000557446	COX19	Q49B96	90 aa		12.75	□□□□□ -0.37
HIF1A-211	ENST00000557446	SCX	Q7RTU7	201 aa		12.75	□□□□□ -0.37
HIF1A-211	ENST00000557446	SVBP	Q8N300	66 aa		12.75	□□□□□ -0.37
HIF1A-211	ENST00000557446	OPRPN	Q99935	248 aa	Predicted RBP	12.75	□□□□□ -0.37
HIF1A-211	ENST00000557446	NXT2	Q9NPJ8	142 aa	Known RBP	12.75	□□□□□ -0.37
HIF1A-211	ENST00000557446	IGHV1-58	A0A0C4DH39	117 aa		12.74	□□□□□ -0.37
HIF1A-211	ENST00000557446	MT-ND6	P03923	174 aa		12.73	□□□□□ -0.37
HIF1A-211	ENST00000557446	ORMDL2	Q53FV1	153 aa		12.73	□□□□□ -0.37
HIF1A-211	ENST00000557446	CHAC1	Q9BUX1	264 aa		12.73	□□□□□ -0.37
HIF1A-211	ENST00000557446	CYSLTR1	Q9Y271	337 aa		12.73	□□□□□ -0.37
HIF1A-211	ENST00000557446		K7EMI3	77 aa		12.72	□□□□□ -0.37
HIF1A-211	ENST00000557446	COX7A2L	O14548	114 aa		12.72	□□□□□ -0.37
HIF1A-211	ENST00000557446	C2orf66	Q6UXQ4	117 aa		12.72	□□□□□ -0.37
HIF1A-211	ENST00000557446	PYGO1	Q9Y3Y4	419 aa		12.72	□□□□□ -0.37
HIF1A-211	ENST00000557446	IGHV3-64	A0A075B6Q5	118 aa		12.71	□□□□□ -0.37
HIF1A-211	ENST00000557446	IFITM10	A6NMD0	228 aa		12.71	□□□□□ -0.37
HIF1A-211	ENST00000557446	MAL	P21145	153 aa		12.71	□□□□□ -0.37
HIF1A-211	ENST00000557446	MRPL18	Q9H0U6	180 aa	Known RBP	12.71	□□□□□ -0.37
HIF1A-211	ENST00000557446	IGLV4-3	A0A075B6K6	122 aa		12.7	□□□□□ -0.38
HIF1A-211	ENST00000557446	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.7	□□□□□ -0.38
HIF1A-211	ENST00000557446	SDIM1	Q6ZPB5	146 aa		12.7	□□□□□ -0.38
HIF1A-211	ENST00000557446	CIRBP-AS1	Q8TBR5	109 aa		12.7	□□□□□ -0.38
HIF1A-211	ENST00000557446	TMEM141	Q96I45	108 aa		12.7	□□□□□ -0.38
HIF1A-211	ENST00000557446	DNAH8	Q96JB1	4490 aa		12.7	□□□□□ -0.38
HIF1A-211	ENST00000557446	FAM229A	H3BQW9	127 aa		12.69	□□□□□ -0.38
HIF1A-211	ENST00000557446	FABP9	Q0Z7S8	132 aa		12.69	□□□□□ -0.38
HIF1A-211	ENST00000557446	LINC00526	Q96FQ7	95 aa		12.69	□□□□□ -0.38
HIF1A-211	ENST00000557446	ALKBH7	Q9BT30	221 aa	Predicted RBP	12.69	□□□□□ -0.38
HIF1A-211	ENST00000557446	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	12.69	□□□□□ -0.38
HIF1A-211	ENST00000557446	C5orf38	Q86SI9	138 aa		12.68	□□□□□ -0.38
HIF1A-211	ENST00000557446	PCLO	Q9Y6V0	5065 aa		12.67	□□□□□ -0.38
HIF1A-211	ENST00000557446	ZNF561-AS1	K7EIQ3	104 aa		12.67	□□□□□ -0.38
HIF1A-211	ENST00000557446	LINC00528	Q8N1L1	170 aa		12.67	□□□□□ -0.38
HIF1A-211	ENST00000557446	PRSS3P2	Q8NHM4	247 aa		12.67	□□□□□ -0.38
HIF1A-211	ENST00000557446	ABCA13	Q86UQ4	5058 aa		12.67	□□□□□ -0.38
HIF1A-211	ENST00000557446	PANO1	I0J062	215 aa		12.66	□□□□□ -0.38

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