RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 VSIG2Q96IQ7 327 aa2.68□□□□□ -1.98
FOXN3-213ENST00000556916 C9orf85Q96MD7 179 aa2.68□□□□□ -1.98
FOXN3-213ENST00000556916 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
FOXN3-213ENST00000556916 CACNA1GO43497 2377 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 SMIM26A0A096LP01 95 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 TRAV12-3A0A0B4J271 114 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 CLPSL1A2RUU4 121 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 H0YGX0 51 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 SOCS3O14543 225 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 IGHG2P01859 326 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 CD28P10747 220 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 RPL35AP18077 110 aaKnown RBP2.67□□□□□ -1.98
FOXN3-213ENST00000556916 ATP5EP56381 51 aaPredicted RBP2.67□□□□□ -1.98
FOXN3-213ENST00000556916 KRTAP12-2P59991 146 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 SEC61GP60059 68 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 Q8NBF4 154 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 LINC00308Q8TCZ7 52 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 CYSTM1Q9H1C7 97 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 V9GYY9 64 aa2.67□□□□□ -1.98
FOXN3-213ENST00000556916 IGHV3OR16-8A0A075B7F1 116 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 TRAV13-2A0A0B4J235 113 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 IGHV3-66A0A0C4DH42 116 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 IGKV3D-7A0A0C4DH55 119 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 TRBV10-3A0A0K0K1G6 114 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 FAM223BA6NKX1 122 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 M0QY20 66 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 RS1O15537 224 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 RPL28P46779 137 aaKnown RBP2.66□□□□□ -1.98
FOXN3-213ENST00000556916 XCL1P47992 114 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 C15orf32Q32M92 178 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 C1orf195Q5TG92 126 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 CLEC19AQ6UXS0 136 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 LINC00336Q6ZUF6 198 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 LINC01561Q8N1V8 128 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 TMEM86BQ8N661 226 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 Q8N6K4 173 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 RNASE6Q93091 150 aaKnown RBP2.66□□□□□ -1.98
FOXN3-213ENST00000556916 OBSCN-AS1Q96MR7 158 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 XCL2Q9UBD3 114 aa2.66□□□□□ -1.98
FOXN3-213ENST00000556916 IGHV3OR16-13A0A075B7E8 117 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 IGHV7-81A0A0B4J1V7 117 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 IGHV3-74A0A0B4J1X5 117 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 IGHV3-35A0A0C4DH35 117 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 KLLNB2CW77 178 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 IGF1P05019 195 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 KRTAP13-3Q3SY46 172 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 MINOS1Q5TGZ0 78 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 FAM74A4Q5TZK3 123 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 IGFL2Q6UWQ7 119 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 TMEM105Q8N8V8 129 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 DEFB104AQ8WTQ1 72 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 UBE2D4Q9Y2X8 147 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 C22orf24Q9Y442 160 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 MINOS1-NBL1R4GNA1 71 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 CEP350Q5VT06 3117 aa2.65□□□□□ -1.99
FOXN3-213ENST00000556916 TRAV7A0A075B6U4 112 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 A0A087WVE0 104 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 IGHV3-49A0A0A0MS15 119 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 ODF3BA8MYP8 253 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 JMJD7-PLA2G4BH0Y9G9 81 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 NDUFA4O00483 81 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 NDUFC1O43677 76 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 TRBV12-3P01733 135 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 CRPP02741 224 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 CCKP06307 115 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 NDPQ00604 133 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 BSPH1Q075Z2 132 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 ECSCRQ19T08 205 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 LYPD5Q6UWN5 251 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 FAM19A3Q7Z5A8 133 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 Q8N2B8 174 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 Q8N9W7 124 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 C14orf132Q9NPU4 83 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 LINC00846Q9NV44 126 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 LAMTOR3Q9UHA4 124 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 PKIGQ9Y2B9 76 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 ICE1Q9Y2F5 2266 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 WDR87Q6ZQQ6 2873 aa2.64□□□□□ -1.99
FOXN3-213ENST00000556916 IGHV3-16A0A0C4DH30 117 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 A0A1W2PNU3 283 aaPredicted RBP2.63□□□□□ -1.99
FOXN3-213ENST00000556916 PRB3Q04118 309 aaPredicted RBP2.63□□□□□ -1.99
FOXN3-213ENST00000556916 KLKP1Q107X0 134 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 FAM223AQ8IWN6 122 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 C20orf197Q8N268 126 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 Q8N377 158 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 FAM104AQ969W3 186 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 C16orf95Q9H693 158 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 Q9HAA7 133 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 ORMDL1Q9P0S3 153 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 FAM215AQ9Y5M1 114 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 CUL9Q8IWT3 2517 aa2.63□□□□□ -1.99
FOXN3-213ENST00000556916 C5orf42Q9H799 3197 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 TRAV23DV6A0A075B6W5 121 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 IGHV1OR15-1A0A075B7D0 117 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 A0A1W2PPR1 153 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 H7BZZ5 65 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 KRTAP10-8P60410 259 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 BLCAPP62952 87 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 ATP1A1-AS1Q5TC04 95 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 SOSTDC1Q6X4U4 206 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms