RNA–Protein interactions for RNA: ENST00000556378.5

NGDN-208, Transcript of neuroguidin, human

TSL 2

Gene NGDN, Length 803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NGDN-208	ENST00000556378		K7EMI3	77 aa		11.23	□□□□□ -0.61
NGDN-208	ENST00000556378	REG3A	Q06141	175 aa		11.23	□□□□□ -0.61
NGDN-208	ENST00000556378	C1orf43	Q9BWL3	253 aa		11.23	□□□□□ -0.61
NGDN-208	ENST00000556378	PRR34	Q9NV39	138 aa		11.23	□□□□□ -0.61
NGDN-208	ENST00000556378	PKHD1	P08F94	4074 aa		11.22	□□□□□ -0.61
NGDN-208	ENST00000556378	RPL39	P62891	51 aa	Known RBP	11.22	□□□□□ -0.61
NGDN-208	ENST00000556378	ORMDL2	Q53FV1	153 aa		11.22	□□□□□ -0.61
NGDN-208	ENST00000556378	SCO1	O75880	301 aa		11.21	□□□□□ -0.61
NGDN-208	ENST00000556378	TIMM21	Q9BVV7	248 aa		11.21	□□□□□ -0.61
NGDN-208	ENST00000556378	UBE2D4	Q9Y2X8	147 aa		11.21	□□□□□ -0.61
NGDN-208	ENST00000556378	IGKV3OR2-268	A0A0C4DH90	116 aa		11.2	□□□□□ -0.62
NGDN-208	ENST00000556378	EREG	O14944	169 aa		11.2	□□□□□ -0.62
NGDN-208	ENST00000556378	S100A1	P23297	94 aa		11.2	□□□□□ -0.62
NGDN-208	ENST00000556378	ZNF664	Q8N3J9	261 aa		11.2	□□□□□ -0.62
NGDN-208	ENST00000556378	CDC42SE2	Q9NRR3	84 aa		11.2	□□□□□ -0.62
NGDN-208	ENST00000556378	CSDC2	Q9Y534	153 aa	Known RBP	11.2	□□□□□ -0.62
NGDN-208	ENST00000556378	TRAV8-4	A0A0B4J246	113 aa		11.19	□□□□□ -0.62
NGDN-208	ENST00000556378	COLCA2	A8K830	154 aa		11.19	□□□□□ -0.62
NGDN-208	ENST00000556378	ATP6V1G1	O75348	118 aa		11.19	□□□□□ -0.62
NGDN-208	ENST00000556378	G0S2	P27469	103 aa		11.19	□□□□□ -0.62
NGDN-208	ENST00000556378	FA2H	Q7L5A8	372 aa		11.19	□□□□□ -0.62
NGDN-208	ENST00000556378	IGLV10-54	A0A075B6I4	117 aa		11.18	□□□□□ -0.62
NGDN-208	ENST00000556378	C18orf32	Q8TCD1	76 aa		11.18	□□□□□ -0.62
NGDN-208	ENST00000556378	SPANXA1	Q9NS26	97 aa		11.18	□□□□□ -0.62
NGDN-208	ENST00000556378	CYSLTR1	Q9Y271	337 aa		11.18	□□□□□ -0.62
NGDN-208	ENST00000556378	C2orf66	Q6UXQ4	117 aa		11.17	□□□□□ -0.62
NGDN-208	ENST00000556378		A0A087WTM6	91 aa		11.16	□□□□□ -0.62
NGDN-208	ENST00000556378	TRGC2	P03986	189 aa		11.16	□□□□□ -0.62
NGDN-208	ENST00000556378	RAB5B	P61020	215 aa		11.15	□□□□□ -0.62
NGDN-208	ENST00000556378	RNASE13	Q5GAN3	156 aa	Known RBP	11.15	□□□□□ -0.62
NGDN-208	ENST00000556378		Q6ZUT4	128 aa		11.15	□□□□□ -0.62
NGDN-208	ENST00000556378	PYGO1	Q9Y3Y4	419 aa		11.15	□□□□□ -0.62
NGDN-208	ENST00000556378		A0A1B0GVY2	172 aa		11.14	□□□□□ -0.63
NGDN-208	ENST00000556378	LINC01546	A6NGU7	62 aa		11.14	□□□□□ -0.63
NGDN-208	ENST00000556378	MRPS36	P82909	103 aa	Known RBP	11.14	□□□□□ -0.63
NGDN-208	ENST00000556378	SS18	Q15532	418 aa		11.14	□□□□□ -0.63
NGDN-208	ENST00000556378	BAALC	Q8WXS3	180 aa		11.14	□□□□□ -0.63
NGDN-208	ENST00000556378	AP5S1	Q9NUS5	200 aa		11.14	□□□□□ -0.63
NGDN-208	ENST00000556378	LINC00959	A0A1B0GUT2	108 aa		11.13	□□□□□ -0.63
NGDN-208	ENST00000556378	LRCOL1	A6NCL2	159 aa		11.13	□□□□□ -0.63
NGDN-208	ENST00000556378	LINC00614	P0C842	121 aa		11.13	□□□□□ -0.63
NGDN-208	ENST00000556378	LCE2D	Q5TA82	110 aa	Predicted RBP	11.13	□□□□□ -0.63
NGDN-208	ENST00000556378	MAPKAPK5-AS1	Q8N8E1	139 aa		11.13	□□□□□ -0.63
NGDN-208	ENST00000556378	OPRPN	Q99935	248 aa	Predicted RBP	11.13	□□□□□ -0.63
NGDN-208	ENST00000556378	DYNC1H1	Q14204	4646 aa	Known RBP	11.12	□□□□□ -0.63
NGDN-208	ENST00000556378	DNAH5	Q8TE73	4624 aa		11.12	□□□□□ -0.63
NGDN-208	ENST00000556378	LINC01549	A6NIU2	74 aa		11.12	□□□□□ -0.63
NGDN-208	ENST00000556378	LECT2	O14960	151 aa		11.12	□□□□□ -0.63
NGDN-208	ENST00000556378	KRTAP26-1	Q6PEX3	210 aa		11.12	□□□□□ -0.63
NGDN-208	ENST00000556378	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.12	□□□□□ -0.63
NGDN-208	ENST00000556378	TOMM6	Q96B49	74 aa		11.12	□□□□□ -0.63
NGDN-208	ENST00000556378	KIAA1109	Q2LD37	5005 aa		11.11	□□□□□ -0.63
NGDN-208	ENST00000556378	GAGE12H	A6NDE8	117 aa		11.11	□□□□□ -0.63
NGDN-208	ENST00000556378	CCL25	O15444	150 aa		11.11	□□□□□ -0.63
NGDN-208	ENST00000556378	SPATA12	Q7Z6I5	190 aa		11.11	□□□□□ -0.63
NGDN-208	ENST00000556378	TMEM141	Q96I45	108 aa		11.11	□□□□□ -0.63
NGDN-208	ENST00000556378	IGLV4-3	A0A075B6K6	122 aa		11.1	□□□□□ -0.63
NGDN-208	ENST00000556378	TRAV13-1	A0A0B4J241	112 aa		11.1	□□□□□ -0.63
NGDN-208	ENST00000556378	C1orf196	B1AJZ1	125 aa		11.1	□□□□□ -0.63
NGDN-208	ENST00000556378	XCL1	P47992	114 aa		11.1	□□□□□ -0.63
NGDN-208	ENST00000556378		Q6ZN92	141 aa		11.1	□□□□□ -0.63
NGDN-208	ENST00000556378	BAGE3	Q86Y29	109 aa		11.1	□□□□□ -0.63
NGDN-208	ENST00000556378	FAM104A	Q969W3	186 aa		11.1	□□□□□ -0.63
NGDN-208	ENST00000556378	URB1-AS1	Q96HZ7	61 aa		11.1	□□□□□ -0.63
NGDN-208	ENST00000556378	SCGB3A1	Q96QR1	104 aa		11.1	□□□□□ -0.63
NGDN-208	ENST00000556378	IGIP	A6NJ69	53 aa		11.09	□□□□□ -0.63
NGDN-208	ENST00000556378	IFITM10	A6NMD0	228 aa		11.09	□□□□□ -0.63
NGDN-208	ENST00000556378	NPS	P0C0P6	89 aa		11.09	□□□□□ -0.63
NGDN-208	ENST00000556378	PAPPA-AS1	Q5QFB9	102 aa		11.09	□□□□□ -0.63
NGDN-208	ENST00000556378		Q8N814	137 aa		11.09	□□□□□ -0.63
NGDN-208	ENST00000556378	WFDC2	Q14508	124 aa		11.08	□□□□□ -0.64
NGDN-208	ENST00000556378	C14orf177	Q52M58	125 aa		11.08	□□□□□ -0.64
NGDN-208	ENST00000556378	TEX43	Q6ZNM6	134 aa		11.08	□□□□□ -0.64
NGDN-208	ENST00000556378	ERAS	Q7Z444	233 aa		11.08	□□□□□ -0.64
NGDN-208	ENST00000556378	TIMM17A	Q99595	171 aa		11.08	□□□□□ -0.64
NGDN-208	ENST00000556378	VCX2	Q9H322	139 aa		11.08	□□□□□ -0.64
NGDN-208	ENST00000556378	USP17L23	D6RBM5	183 aa		11.07	□□□□□ -0.64
NGDN-208	ENST00000556378	CHCHD1	Q96BP2	118 aa	Known RBP	11.07	□□□□□ -0.64
NGDN-208	ENST00000556378	C2orf88	Q9BSF0	95 aa		11.07	□□□□□ -0.64
NGDN-208	ENST00000556378	PGPEP1	Q9NXJ5	209 aa		11.07	□□□□□ -0.64
NGDN-208	ENST00000556378	HBD	P02042	147 aa		11.06	□□□□□ -0.64
NGDN-208	ENST00000556378	KRTAP10-2	P60368	255 aa		11.06	□□□□□ -0.64
NGDN-208	ENST00000556378	CD164L2	Q6UWJ8	174 aa		11.06	□□□□□ -0.64
NGDN-208	ENST00000556378	FOXI1	Q12951	378 aa		11.05	□□□□□ -0.64
NGDN-208	ENST00000556378	PMCHL1	Q16048	86 aa		11.05	□□□□□ -0.64
NGDN-208	ENST00000556378	CFAP161	Q6P656	301 aa		11.05	□□□□□ -0.64
NGDN-208	ENST00000556378	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.04	□□□□□ -0.64
NGDN-208	ENST00000556378	CDPF1	Q6NVV7	123 aa		11.04	□□□□□ -0.64
NGDN-208	ENST00000556378	NTN5	Q8WTR8	489 aa	Predicted RBP	11.04	□□□□□ -0.64
NGDN-208	ENST00000556378	AMELX	Q99217	191 aa		11.04	□□□□□ -0.64
NGDN-208	ENST00000556378		A0A096LNJ9	63 aa		11.03	□□□□□ -0.64
NGDN-208	ENST00000556378	IGLV5-52	A0A0A0MRZ9	124 aa		11.03	□□□□□ -0.64
NGDN-208	ENST00000556378	C16orf90	A8MZG2	172 aa		11.03	□□□□□ -0.64
NGDN-208	ENST00000556378	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.03	□□□□□ -0.64
NGDN-208	ENST00000556378	HSBP1	O75506	76 aa		11.03	□□□□□ -0.64
NGDN-208	ENST00000556378	FUS	P35637	526 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
NGDN-208	ENST00000556378	ZC2HC1B	Q5TFG8	222 aa		11.03	□□□□□ -0.64
NGDN-208	ENST00000556378	LRP1B	Q9NZR2	4599 aa		11.02	□□□□□ -0.64
NGDN-208	ENST00000556378	COX7A2L	O14548	114 aa		11.02	□□□□□ -0.65
NGDN-208	ENST00000556378	LINC00173	Q6ZV60	143 aa		11.02	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms