RNA–Protein interactions for RNA: ENST00000556378.5

NGDN-208, Transcript of neuroguidin, humanhuman

TSL 2

Gene NGDN, Length 803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-208ENST00000556378 NISCHQ9Y2I1 1504 aa40.11■■■■■ 4.01
NGDN-208ENST00000556378 CCDC180Q9P1Z9 1646 aa35.61■■■■□ 3.29
NGDN-208ENST00000556378 ABCC9O60706 1549 aa34.46■■■■□ 3.11
NGDN-208ENST00000556378 ZCCHC6Q5VYS8 1495 aaKnown RBP33.46■■■□□ 2.95
NGDN-208ENST00000556378 DCAF8L2P0C7V8 631 aa33.45■■■□□ 2.95
NGDN-208ENST00000556378 NACADO15069 1562 aa33.34■■■□□ 2.93
NGDN-208ENST00000556378 RB1CC1Q8TDY2 1594 aa33.34■■■□□ 2.93
NGDN-208ENST00000556378 MYO15BQ96JP2 1530 aa33.19■■■□□ 2.9
NGDN-208ENST00000556378 DCAF1Q9Y4B6 1507 aa33.19■■■□□ 2.9
NGDN-208ENST00000556378 UNC13AQ9UPW8 1703 aa32.71■■■□□ 2.83
NGDN-208ENST00000556378 DNAJC5BQ9UF47 199 aa32.68■■■□□ 2.82
NGDN-208ENST00000556378 SCRIBQ14160 1630 aa32.49■■■□□ 2.79
NGDN-208ENST00000556378 BICRAQ9NZM4 1560 aa32.27■■■□□ 2.76
NGDN-208ENST00000556378 PABPN1Q86U42 306 aaKnown RBP eCLIP32.25■■■□□ 2.75
NGDN-208ENST00000556378 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
NGDN-208ENST00000556378 EIF4G1Q04637 1599 aaKnown RBP31.4■■■□□ 2.62
NGDN-208ENST00000556378 CC2D2AQ9P2K1 1620 aa31.23■■■□□ 2.59
NGDN-208ENST00000556378 CECR2Q9BXF3 1484 aa31.19■■■□□ 2.58
NGDN-208ENST00000556378 SMARCA4P51532 1647 aa31.09■■■□□ 2.57
NGDN-208ENST00000556378 BAZ1AQ9NRL2 1556 aaPredicted RBP31.09■■■□□ 2.57
NGDN-208ENST00000556378 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
NGDN-208ENST00000556378 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
NGDN-208ENST00000556378 ATAD2BQ9ULI0 1458 aa30.78■■■□□ 2.52
NGDN-208ENST00000556378 PEG3Q9GZU2 1588 aa30.75■■■□□ 2.51
NGDN-208ENST00000556378 NCAPD3P42695 1498 aa30.71■■■□□ 2.51
NGDN-208ENST00000556378 WIZO95785 1651 aa30.67■■■□□ 2.5
NGDN-208ENST00000556378 RSF1Q96T23 1441 aaPredicted RBP30.65■■■□□ 2.5
NGDN-208ENST00000556378 HMGXB3Q12766 1538 aa30.63■■■□□ 2.49
NGDN-208ENST00000556378 BAZ1BQ9UIG0 1483 aaKnown RBP30.59■■■□□ 2.49
NGDN-208ENST00000556378 DNAJC5Q9H3Z4 198 aa30.4■■■□□ 2.46
NGDN-208ENST00000556378 TOP2AP11388 1531 aaKnown RBP30.32■■■□□ 2.44
NGDN-208ENST00000556378 SUPT5HO00267 1087 aaKnown RBP30.2■■■□□ 2.43
NGDN-208ENST00000556378 CCDC88BA6NC98 1476 aa29.93■■■□□ 2.38
NGDN-208ENST00000556378 LAMC3Q9Y6N6 1575 aa29.92■■■□□ 2.38
NGDN-208ENST00000556378 NESP48681 1621 aa29.91■■■□□ 2.38
NGDN-208ENST00000556378 CADPSQ9ULU8 1353 aa29.85■■■□□ 2.37
NGDN-208ENST00000556378 PRDM2Q13029 1718 aa29.74■■■□□ 2.35
NGDN-208ENST00000556378 CFTRP13569 1480 aa29.73■■■□□ 2.35
NGDN-208ENST00000556378 ERCC6Q03468 1493 aa29.72■■■□□ 2.35
NGDN-208ENST00000556378 PDS5BQ9NTI5 1447 aa29.69■■■□□ 2.34
NGDN-208ENST00000556378 KIF21AQ7Z4S6 1674 aa29.68■■■□□ 2.34
NGDN-208ENST00000556378 CUX2O14529 1486 aa29.53■■■□□ 2.32
NGDN-208ENST00000556378 FANCD2Q9BXW9 1451 aa29.53■■■□□ 2.32
NGDN-208ENST00000556378 CEP164Q9UPV0 1460 aa29.48■■■□□ 2.31
NGDN-208ENST00000556378 THOC2Q8NI27 1593 aaKnown RBP29.41■■■□□ 2.3
NGDN-208ENST00000556378 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
NGDN-208ENST00000556378 WDR62O43379 1518 aa29.24■■■□□ 2.27
NGDN-208ENST00000556378 URB2Q14146 1524 aaKnown RBP29.2■■■□□ 2.27
NGDN-208ENST00000556378 ABCC8Q09428 1581 aa29.14■■■□□ 2.26
NGDN-208ENST00000556378 DNMBPQ6XZF7 1577 aa29.11■■■□□ 2.25
NGDN-208ENST00000556378 TOPBP1Q92547 1522 aa29.1■■■□□ 2.25
NGDN-208ENST00000556378 CUX1P39880 1505 aa28.99■■■□□ 2.23
NGDN-208ENST00000556378 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
NGDN-208ENST00000556378 BIVM-ERCC5R4GMW8 1640 aa28.88■■■□□ 2.21
NGDN-208ENST00000556378 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
NGDN-208ENST00000556378 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
NGDN-208ENST00000556378 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
NGDN-208ENST00000556378 SYNJ1O43426 1573 aa28.85■■■□□ 2.21
NGDN-208ENST00000556378 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
NGDN-208ENST00000556378 IFT140Q96RY7 1462 aa28.84■■■□□ 2.21
NGDN-208ENST00000556378 TARBP1Q13395 1621 aaKnown RBP28.78■■■□□ 2.2
NGDN-208ENST00000556378 SOGA1O94964 1423 aa28.76■■■□□ 2.19
NGDN-208ENST00000556378 RAD54L2Q9Y4B4 1467 aa28.73■■■□□ 2.19
NGDN-208ENST00000556378 WDR97A6NE52 1622 aa28.65■■■□□ 2.18
NGDN-208ENST00000556378 ZNF608Q9ULD9 1512 aaPredicted RBP28.65■■■□□ 2.18
NGDN-208ENST00000556378 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
NGDN-208ENST00000556378 ABCA10Q8WWZ4 1543 aa28.57■■■□□ 2.16
NGDN-208ENST00000556378 AQRO60306 1485 aaKnown RBP eCLIP28.55■■■□□ 2.164e-7■■■■■ 36
NGDN-208ENST00000556378 TDRD9Q8NDG6 1382 aaKnown RBP28.54■■■□□ 2.16
NGDN-208ENST00000556378 PBRM1Q86U86 1689 aa28.47■■■□□ 2.15
NGDN-208ENST00000556378 ABCA5Q8WWZ7 1642 aa28.46■■■□□ 2.15
NGDN-208ENST00000556378 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
NGDN-208ENST00000556378 GRIN2BQ13224 1484 aa28.39■■■□□ 2.13
NGDN-208ENST00000556378 CHIC1Q5VXU3 224 aa28.32■■■□□ 2.12
NGDN-208ENST00000556378 KIF27Q86VH2 1401 aa28.31■■■□□ 2.12
NGDN-208ENST00000556378 SNAPC4Q5SXM2 1469 aa28.29■■■□□ 2.12
NGDN-208ENST00000556378 CHD1O14646 1710 aa28.28■■■□□ 2.12
NGDN-208ENST00000556378 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
NGDN-208ENST00000556378 ERICH3Q5RHP9 1530 aa28.26■■■□□ 2.11
NGDN-208ENST00000556378 FBLN2P98095 1184 aa28.2■■■□□ 2.1
NGDN-208ENST00000556378 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
NGDN-208ENST00000556378 SYNJ2O15056 1496 aa28.16■■■□□ 2.1
NGDN-208ENST00000556378 OSCARQ8IYS5 282 aa28.16■■■□□ 2.1
NGDN-208ENST00000556378 CHMP7Q8WUX9 453 aaPredicted RBP28.16■■■□□ 2.1
NGDN-208ENST00000556378 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
NGDN-208ENST00000556378 CUL7Q14999 1698 aa28.13■■■□□ 2.09
NGDN-208ENST00000556378 IGF1RP08069 1367 aa28.11■■■□□ 2.09
NGDN-208ENST00000556378 FHAD1B1AJZ9 1412 aa28.1■■■□□ 2.09
NGDN-208ENST00000556378 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
NGDN-208ENST00000556378 CARMIL1Q5VZK9 1371 aa27.98■■■□□ 2.07
NGDN-208ENST00000556378 EEA1Q15075 1411 aa27.97■■■□□ 2.07
NGDN-208ENST00000556378 FAM9AQ8IZU1 332 aaPredicted RBP27.91■■■□□ 2.06
NGDN-208ENST00000556378 CSRNP3Q8WYN3 585 aa27.9■■■□□ 2.06
NGDN-208ENST00000556378 CEP170Q5SW79 1584 aa27.88■■■□□ 2.05
NGDN-208ENST00000556378 RIMBP3CA6NJZ7 1639 aa27.86■■■□□ 2.05
NGDN-208ENST00000556378 RIMBP3BA6NNM3 1639 aa27.86■■■□□ 2.05
NGDN-208ENST00000556378 RIMBP3Q9UFD9 1639 aa27.86■■■□□ 2.05
NGDN-208ENST00000556378 RAPGEF2Q9Y4G8 1499 aa27.86■■■□□ 2.05
NGDN-208ENST00000556378 CLASP1Q7Z460 1538 aa27.85■■■□□ 2.05
NGDN-208ENST00000556378 NUP160Q12769 1436 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms