RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 Q6ZRN7 208 aaPredicted RBP8.06□□□□□ -1.12
ACTN1-214ENST00000555075 SPATA12Q7Z6I5 190 aa8.06□□□□□ -1.12
ACTN1-214ENST00000555075 MRPL52Q86TS9 123 aaKnown RBP8.06□□□□□ -1.12
ACTN1-214ENST00000555075 ZNF664Q8N3J9 261 aa8.06□□□□□ -1.12
ACTN1-214ENST00000555075 BAALCQ8WXS3 180 aa8.06□□□□□ -1.12
ACTN1-214ENST00000555075 ALKBH7Q9BT30 221 aaPredicted RBP8.06□□□□□ -1.12
ACTN1-214ENST00000555075 SPANXA1Q9NS26 97 aa8.06□□□□□ -1.12
ACTN1-214ENST00000555075 CYSLTR1Q9Y271 337 aa8.06□□□□□ -1.12
ACTN1-214ENST00000555075 FAT2Q9NYQ8 4349 aa8.06□□□□□ -1.12
ACTN1-214ENST00000555075 DNAH17Q9UFH2 4485 aa8.05□□□□□ -1.12
ACTN1-214ENST00000555075 PRSS47A8MTI9 375 aa8.05□□□□□ -1.12
ACTN1-214ENST00000555075 LECT2O14960 151 aa8.05□□□□□ -1.12
ACTN1-214ENST00000555075 C14orf177Q52M58 125 aa8.05□□□□□ -1.12
ACTN1-214ENST00000555075 Q6ZN92 141 aa8.05□□□□□ -1.12
ACTN1-214ENST00000555075 PRR34Q9NV39 138 aa8.05□□□□□ -1.12
ACTN1-214ENST00000555075 RAB5BP61020 215 aa8.04□□□□□ -1.12
ACTN1-214ENST00000555075 RPL39P62891 51 aaKnown RBP8.04□□□□□ -1.12
ACTN1-214ENST00000555075 TIMM21Q9BVV7 248 aa8.04□□□□□ -1.12
ACTN1-214ENST00000555075 UBE2D4Q9Y2X8 147 aa8.04□□□□□ -1.12
ACTN1-214ENST00000555075 GAGE12HA6NDE8 117 aa8.03□□□□□ -1.12
ACTN1-214ENST00000555075 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
ACTN1-214ENST00000555075 CFAP161Q6P656 301 aa8.03□□□□□ -1.12
ACTN1-214ENST00000555075 C2orf66Q6UXQ4 117 aa8.03□□□□□ -1.12
ACTN1-214ENST00000555075 CDC42SE2Q9NRR3 84 aa8.03□□□□□ -1.12
ACTN1-214ENST00000555075 PGPEP1Q9NXJ5 209 aa8.03□□□□□ -1.12
ACTN1-214ENST00000555075 CSDC2Q9Y534 153 aaKnown RBP8.03□□□□□ -1.12
ACTN1-214ENST00000555075 IGLV5-52A0A0A0MRZ9 124 aa8.02□□□□□ -1.13
ACTN1-214ENST00000555075 TRAV13-1A0A0B4J241 112 aa8.02□□□□□ -1.13
ACTN1-214ENST00000555075 LINC01549A6NIU2 74 aa8.02□□□□□ -1.13
ACTN1-214ENST00000555075 XCL1P47992 114 aa8.02□□□□□ -1.13
ACTN1-214ENST00000555075 RNASE13Q5GAN3 156 aaKnown RBP8.02□□□□□ -1.13
ACTN1-214ENST00000555075 PAPPA-AS1Q5QFB9 102 aa8.02□□□□□ -1.13
ACTN1-214ENST00000555075 CHCHD10Q8WYQ3 142 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-214ENST00000555075 C2orf88Q9BSF0 95 aa8.02□□□□□ -1.13
ACTN1-214ENST00000555075 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.01□□□□□ -1.13
ACTN1-214ENST00000555075 IFITM10A6NMD0 228 aa8.01□□□□□ -1.13
ACTN1-214ENST00000555075 C1orf196B1AJZ1 125 aa8.01□□□□□ -1.13
ACTN1-214ENST00000555075 CCL25O15444 150 aa8.01□□□□□ -1.13
ACTN1-214ENST00000555075 CDPF1Q6NVV7 123 aa8.01□□□□□ -1.13
ACTN1-214ENST00000555075 Q6ZUT4 128 aa8.01□□□□□ -1.13
ACTN1-214ENST00000555075 Q8N814 137 aa8.01□□□□□ -1.13
ACTN1-214ENST00000555075 NTN5Q8WTR8 489 aaPredicted RBP8.01□□□□□ -1.13
ACTN1-214ENST00000555075 AP5S1Q9NUS5 200 aa8.01□□□□□ -1.13
ACTN1-214ENST00000555075 KIAA1109Q2LD37 5005 aa8.01□□□□□ -1.13
ACTN1-214ENST00000555075 LINC00959A0A1B0GUT2 108 aa8□□□□□ -1.13
ACTN1-214ENST00000555075 A0A1B0GVY2 172 aa8□□□□□ -1.13
ACTN1-214ENST00000555075 USP17L23D6RBM5 183 aa8□□□□□ -1.13
ACTN1-214ENST00000555075 MALP21145 153 aa8□□□□□ -1.13
ACTN1-214ENST00000555075 S100A1P23297 94 aa8□□□□□ -1.13
ACTN1-214ENST00000555075 TEX43Q6ZNM6 134 aa8□□□□□ -1.13
ACTN1-214ENST00000555075 BAGE3Q86Y29 109 aa8□□□□□ -1.13
ACTN1-214ENST00000555075 TMEM141Q96I45 108 aa8□□□□□ -1.13
ACTN1-214ENST00000555075 SCGB3A1Q96QR1 104 aa8□□□□□ -1.13
ACTN1-214ENST00000555075 VCX2Q9H322 139 aa8□□□□□ -1.13
ACTN1-214ENST00000555075 PKD1P98161 4303 aa7.99□□□□□ -1.13
ACTN1-214ENST00000555075 hDV102S1A0JD36 115 aa7.99□□□□□ -1.13
ACTN1-214ENST00000555075 LRCOL1A6NCL2 159 aa7.99□□□□□ -1.13
ACTN1-214ENST00000555075 LINC00614P0C842 121 aa7.99□□□□□ -1.13
ACTN1-214ENST00000555075 MRPS36P82909 103 aaKnown RBP7.99□□□□□ -1.13
ACTN1-214ENST00000555075 YPEL4Q96NS1 127 aa7.99□□□□□ -1.13
ACTN1-214ENST00000555075 PYGO1Q9Y3Y4 419 aa7.99□□□□□ -1.13
ACTN1-214ENST00000555075 DYNC1H1Q14204 4646 aaKnown RBP7.98□□□□□ -1.13
ACTN1-214ENST00000555075 C18orf32Q8TCD1 76 aa7.98□□□□□ -1.13
ACTN1-214ENST00000555075 OPRPNQ99935 248 aaPredicted RBP7.98□□□□□ -1.13
ACTN1-214ENST00000555075 PKHD1P08F94 4074 aa7.97□□□□□ -1.13
ACTN1-214ENST00000555075 COX7A2LO14548 114 aa7.97□□□□□ -1.13
ACTN1-214ENST00000555075 SCO1O75880 301 aa7.97□□□□□ -1.13
ACTN1-214ENST00000555075 TRGC2P03986 189 aa7.97□□□□□ -1.13
ACTN1-214ENST00000555075 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
ACTN1-214ENST00000555075 MAPKAPK5-AS1Q8N8E1 139 aa7.97□□□□□ -1.13
ACTN1-214ENST00000555075 TOMM6Q96B49 74 aa7.97□□□□□ -1.13
ACTN1-214ENST00000555075 IGLV4-3A0A075B6K6 122 aa7.96□□□□□ -1.14
ACTN1-214ENST00000555075 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.96□□□□□ -1.14
ACTN1-214ENST00000555075 APOMO95445 188 aa7.96□□□□□ -1.14
ACTN1-214ENST00000555075 NPSP0C0P6 89 aa7.96□□□□□ -1.14
ACTN1-214ENST00000555075 GCSHP23434 173 aa7.96□□□□□ -1.14
ACTN1-214ENST00000555075 KRTAP10-2P60368 255 aa7.96□□□□□ -1.14
ACTN1-214ENST00000555075 ERASQ7Z444 233 aa7.96□□□□□ -1.14
ACTN1-214ENST00000555075 PCLOQ9Y6V0 5065 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 IGHV1-58A0A0C4DH39 117 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 COLCA2A8K830 154 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.95□□□□□ -1.14
ACTN1-214ENST00000555075 ZNF561-AS1K7EIQ3 104 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 HSBP1O75506 76 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 HBDP02042 147 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 FUSP35637 526 aaKnown RBP eCLIP7.95□□□□□ -1.14
ACTN1-214ENST00000555075 NDUFA6P56556 154 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 WFDC2Q14508 124 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 TIMM17AQ99595 171 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 KRTAP17-1Q9BYP8 105 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 DNAH11Q96DT5 4516 aa7.95□□□□□ -1.14
ACTN1-214ENST00000555075 SEC11AP67812 179 aa7.94□□□□□ -1.14
ACTN1-214ENST00000555075 FOXI1Q12951 378 aa7.94□□□□□ -1.14
ACTN1-214ENST00000555075 HIGD2BQ4VC39 106 aa7.94□□□□□ -1.14
ACTN1-214ENST00000555075 C5orf38Q86SI9 138 aa7.94□□□□□ -1.14
ACTN1-214ENST00000555075 CHCHD1Q96BP2 118 aaKnown RBP7.94□□□□□ -1.14
ACTN1-214ENST00000555075 GEMIN7Q9H840 131 aaKnown RBP7.94□□□□□ -1.14
ACTN1-214ENST00000555075 LINC01546A6NGU7 62 aa7.93□□□□□ -1.14
ACTN1-214ENST00000555075 ATP6V1G1O75348 118 aa7.93□□□□□ -1.14
ACTN1-214ENST00000555075 KRTAP26-1Q6PEX3 210 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms