RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 F8W1H4 67 aa12.41□□□□□ -0.42
SHOX-204ENST00000554971 LEPROTO15243 131 aa12.41□□□□□ -0.42
SHOX-204ENST00000554971 LINC01587Q99440 93 aa12.41□□□□□ -0.42
SHOX-204ENST00000554971 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
SHOX-204ENST00000554971 TMEM223A0PJW6 202 aa12.41□□□□□ -0.42
SHOX-204ENST00000554971 J3QQQ9 107 aa12.41□□□□□ -0.42
SHOX-204ENST00000554971 UBE2D1P51668 147 aa12.41□□□□□ -0.42
SHOX-204ENST00000554971 SLC25A29Q8N8R3 303 aa12.41□□□□□ -0.42
SHOX-204ENST00000554971 C11orf72Q8NBR9 251 aa12.41□□□□□ -0.42
SHOX-204ENST00000554971 PLEKHB2Q96CS7 222 aa12.41□□□□□ -0.42
SHOX-204ENST00000554971 IGLV4-3A0A075B6K6 122 aa12.4□□□□□ -0.42
SHOX-204ENST00000554971 LGALS3P17931 250 aaKnown RBP12.4□□□□□ -0.42
SHOX-204ENST00000554971 AMELXQ99217 191 aa12.4□□□□□ -0.42
SHOX-204ENST00000554971 IGHV3-53P01767 116 aa12.39□□□□□ -0.43
SHOX-204ENST00000554971 CFAP126Q5VTH2 177 aa12.39□□□□□ -0.43
SHOX-204ENST00000554971 RNF183Q96D59 192 aa12.39□□□□□ -0.43
SHOX-204ENST00000554971 SPATA25Q9BR10 227 aa12.39□□□□□ -0.43
SHOX-204ENST00000554971 SPANXA1Q9NS26 97 aa12.39□□□□□ -0.43
SHOX-204ENST00000554971 RS1O15537 224 aa12.39□□□□□ -0.43
SHOX-204ENST00000554971 HTN1P15515 57 aa12.39□□□□□ -0.43
SHOX-204ENST00000554971 NHLRC4P0CG21 123 aaPredicted RBP12.38□□□□□ -0.43
SHOX-204ENST00000554971 STARD9Q9P2P6 4700 aa12.38□□□□□ -0.43
SHOX-204ENST00000554971 EMP1P54849 157 aa12.37□□□□□ -0.43
SHOX-204ENST00000554971 TENM2Q9NT68 2774 aa12.37□□□□□ -0.43
SHOX-204ENST00000554971 ZNF22P17026 224 aaPredicted RBP12.37□□□□□ -0.43
SHOX-204ENST00000554971 MRPS36P82909 103 aaKnown RBP12.37□□□□□ -0.43
SHOX-204ENST00000554971 RNF151Q2KHN1 245 aa12.37□□□□□ -0.43
SHOX-204ENST00000554971 LYRM7Q5U5X0 104 aa12.37□□□□□ -0.43
SHOX-204ENST00000554971 C1orf158Q8N1D5 194 aa12.36□□□□□ -0.43
SHOX-204ENST00000554971 VPS25Q9BRG1 176 aa12.36□□□□□ -0.43
SHOX-204ENST00000554971 C1QTNF4Q9BXJ3 329 aa12.36□□□□□ -0.43
SHOX-204ENST00000554971 IGHV3-30P01768 117 aa12.35□□□□□ -0.43
SHOX-204ENST00000554971 IGHV3-30-5P0DP03 117 aa12.35□□□□□ -0.43
SHOX-204ENST00000554971 DEFB104AQ8WTQ1 72 aa12.35□□□□□ -0.43
SHOX-204ENST00000554971 X6R8D5 127 aa12.35□□□□□ -0.43
SHOX-204ENST00000554971 TSPEAR-AS2P59090 65 aa12.34□□□□□ -0.43
SHOX-204ENST00000554971 OPRPNQ99935 248 aaPredicted RBP12.34□□□□□ -0.43
SHOX-204ENST00000554971 DYNC2H1Q8NCM8 4307 aaKnown RBP12.34□□□□□ -0.43
SHOX-204ENST00000554971 IGHV3-73A0A0B4J1V6 119 aa12.33□□□□□ -0.44
SHOX-204ENST00000554971 TIMM21Q9BVV7 248 aa12.33□□□□□ -0.44
SHOX-204ENST00000554971 MRPL16Q9NX20 251 aaKnown RBP12.33□□□□□ -0.44
SHOX-204ENST00000554971 A0A0J9YXV3 536 aa12.33□□□□□ -0.44
SHOX-204ENST00000554971 PRM2P04554 102 aa12.33□□□□□ -0.44
SHOX-204ENST00000554971 IL17DQ8TAD2 202 aa12.33□□□□□ -0.44
SHOX-204ENST00000554971 CHCHD7Q9BUK0 85 aa12.33□□□□□ -0.44
SHOX-204ENST00000554971 PGPEP1Q9NXJ5 209 aa12.33□□□□□ -0.44
SHOX-204ENST00000554971 TINCRA0A1B0GVN0 87 aa12.32□□□□□ -0.44
SHOX-204ENST00000554971 COTL1Q14019 142 aa12.32□□□□□ -0.44
SHOX-204ENST00000554971 LYSTQ99698 3801 aa12.32□□□□□ -0.44
SHOX-204ENST00000554971 PLECQ15149 4684 aaKnown RBP12.31□□□□□ -0.44
SHOX-204ENST00000554971 PCP4P48539 62 aa12.31□□□□□ -0.44
SHOX-204ENST00000554971 FAM104AQ969W3 186 aa12.31□□□□□ -0.44
SHOX-204ENST00000554971 UBE2D4Q9Y2X8 147 aa12.31□□□□□ -0.44
SHOX-204ENST00000554971 IGHV3OR16-12A0A075B7B8 117 aa12.31□□□□□ -0.44
SHOX-204ENST00000554971 TRBV10-1A0A0K0K1A3 114 aa12.31□□□□□ -0.44
SHOX-204ENST00000554971 TMEM238C9JI98 176 aa12.31□□□□□ -0.44
SHOX-204ENST00000554971 GAGE13Q4V321 117 aa12.31□□□□□ -0.44
SHOX-204ENST00000554971 Q6ZSN1 163 aa12.31□□□□□ -0.44
SHOX-204ENST00000554971 J3QR89 54 aa12.3□□□□□ -0.44
SHOX-204ENST00000554971 Q8NAQ8 132 aa12.3□□□□□ -0.44
SHOX-204ENST00000554971 CIDEAO60543 219 aa12.29□□□□□ -0.44
SHOX-204ENST00000554971 RPL24P83731 157 aaKnown RBP12.29□□□□□ -0.44
SHOX-204ENST00000554971 SMAGPQ0VAQ4 97 aa12.29□□□□□ -0.44
SHOX-204ENST00000554971 TRBV20-1A0A075B6N2 111 aa12.29□□□□□ -0.44
SHOX-204ENST00000554971 UBE2D3P61077 147 aa12.29□□□□□ -0.44
SHOX-204ENST00000554971 UBE2D2P62837 147 aa12.29□□□□□ -0.44
SHOX-204ENST00000554971 IGHV1-58A0A0C4DH39 117 aa12.28□□□□□ -0.44
SHOX-204ENST00000554971 H3BMG7 143 aa12.28□□□□□ -0.44
SHOX-204ENST00000554971 DEFB4AO15263 64 aa12.28□□□□□ -0.44
SHOX-204ENST00000554971 C10orf126Q8N4M7 172 aa12.28□□□□□ -0.44
SHOX-204ENST00000554971 TMEM263Q8WUH6 116 aaKnown RBP12.28□□□□□ -0.44
SHOX-204ENST00000554971 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.27□□□□□ -0.44
SHOX-204ENST00000554971 TSPAN13O95857 204 aa12.27□□□□□ -0.44
SHOX-204ENST00000554971 CFC1BP0CG36 223 aa12.27□□□□□ -0.44
SHOX-204ENST00000554971 CFC1P0CG37 223 aa12.27□□□□□ -0.44
SHOX-204ENST00000554971 IGHV3-30-3P0DP02 117 aa12.27□□□□□ -0.44
SHOX-204ENST00000554971 AZU1P20160 251 aa12.27□□□□□ -0.44
SHOX-204ENST00000554971 TIRAPP58753 221 aa12.27□□□□□ -0.44
SHOX-204ENST00000554971 PRO1854Q9UHT4 67 aa12.27□□□□□ -0.44
SHOX-204ENST00000554971 IGHV4-28A0A0C4DH34 117 aa12.27□□□□□ -0.45
SHOX-204ENST00000554971 A0A0B4J2C4 111 aa12.26□□□□□ -0.45
SHOX-204ENST00000554971 A0A0J9YWU9 116 aa12.26□□□□□ -0.45
SHOX-204ENST00000554971 DAZ2Q13117 558 aaKnown RBP12.26□□□□□ -0.45
SHOX-204ENST00000554971 PRO0461Q9UI25 63 aa12.26□□□□□ -0.45
SHOX-204ENST00000554971 CSDC2Q9Y534 153 aaKnown RBP12.26□□□□□ -0.45
SHOX-204ENST00000554971 TRAV4A0A0B4J268 109 aa12.25□□□□□ -0.45
SHOX-204ENST00000554971 APOMO95445 188 aa12.25□□□□□ -0.45
SHOX-204ENST00000554971 MIFP14174 115 aa12.25□□□□□ -0.45
SHOX-204ENST00000554971 DAZ4Q86SG3 579 aaKnown RBP12.25□□□□□ -0.45
SHOX-204ENST00000554971 DAZ3Q9NR90 486 aaKnown RBP12.25□□□□□ -0.45
SHOX-204ENST00000554971 RPL36AP83881 106 aaKnown RBP12.25□□□□□ -0.45
SHOX-204ENST00000554971 RPL36ALQ969Q0 106 aaKnown RBP12.25□□□□□ -0.45
SHOX-204ENST00000554971 NACAE9PAV3 2078 aa12.25□□□□□ -0.45
SHOX-204ENST00000554971 IGLV5-45A0A087WSX0 123 aa12.24□□□□□ -0.45
SHOX-204ENST00000554971 A0A0J9YXY3 114 aa12.24□□□□□ -0.45
SHOX-204ENST00000554971 WFDC2Q14508 124 aa12.24□□□□□ -0.45
SHOX-204ENST00000554971 VSIG2Q96IQ7 327 aa12.24□□□□□ -0.45
SHOX-204ENST00000554971 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
SHOX-204ENST00000554971 TEX48A0A1B0GUV7 120 aa12.23□□□□□ -0.45
SHOX-204ENST00000554971 PLAC8L1A1L4L8 177 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms