RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 MCRIP1C9JLW8 97 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 IGKV1-16P04430 117 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 FABP1P07148 127 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 SAA2P0DJI9 122 aaPredicted RBP2.04□□□□□ -2.08
PABPN1-204ENST00000554062 G0S2P27469 103 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 BRS3P32247 399 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 RPS25P62851 125 aaKnown RBP2.04□□□□□ -2.08
PABPN1-204ENST00000554062 MSMO1Q15800 293 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 HSD17B12Q53GQ0 312 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 Q6ZQT0 140 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 C6orf201Q7Z4U5 140 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 VPS13BQ7Z7G8 4022 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 ABCA13Q86UQ4 5058 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.04□□□□□ -2.08
PABPN1-204ENST00000554062 NUP35Q8NFH5 326 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 OR2T10Q8NGZ9 312 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 OR4K15Q8NH41 348 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 LEAP2Q969E1 77 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 ARHGAP5-AS1Q96IT6 56 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 LINC00467Q9BRT7 94 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 CST11Q9H112 138 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 BANF2Q9H503 90 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 TPRKBQ9Y3C4 175 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 UFC1Q9Y3C8 167 aa2.04□□□□□ -2.08
PABPN1-204ENST00000554062 FAT3Q8TDW7 4589 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 E7EUB6 86 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 H3BUA1 57 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 SCTP09683 121 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 HIST1H1DP16402 221 aaKnown RBP2.03□□□□□ -2.08
PABPN1-204ENST00000554062 Q1T7F1 81 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 IZUMO2Q6UXV1 221 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 LINC00322Q6ZN03 302 aaPredicted RBP2.03□□□□□ -2.08
PABPN1-204ENST00000554062 COA5Q86WW8 74 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 TCTEX1D1Q8N7M0 179 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 C4orf3Q8WVX3 66 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 TMEM203Q969S6 136 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 SCN3BQ9NY72 215 aa2.03□□□□□ -2.08
PABPN1-204ENST00000554062 PNMA8CA0A1B0GUJ8 204 aa2.02□□□□□ -2.09
PABPN1-204ENST00000554062 G3V318 75 aa2.02□□□□□ -2.09
PABPN1-204ENST00000554062 TAX1BP3O14907 124 aa2.02□□□□□ -2.09
PABPN1-204ENST00000554062 CTSDP07339 412 aaPredicted RBP2.02□□□□□ -2.09
PABPN1-204ENST00000554062 NFYBP25208 207 aa2.02□□□□□ -2.09
PABPN1-204ENST00000554062 INSL3P51460 131 aa2.02□□□□□ -2.09
PABPN1-204ENST00000554062 RPL39P5Q59GN2 51 aa2.02□□□□□ -2.09
PABPN1-204ENST00000554062 OR5H6Q8NGV6 325 aa2.02□□□□□ -2.09
PABPN1-204ENST00000554062 TRAPPC2LQ9UL33 140 aa2.02□□□□□ -2.09
PABPN1-204ENST00000554062 TRGV2A0A075B6R0 118 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 A0A1B0GV72 72 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 TCRBV4S1A1TA0A5B7 111 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 IGLV1-51P01701 117 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 MIFP14174 115 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 SRIP30626 198 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 SDC2P34741 201 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 CRYBA4P53673 196 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 DEFA3P59666 94 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 SMIM20Q8N5G0 67 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 TTC9CQ8N5M4 171 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 C9orf163Q8N9P6 203 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 BET1LQ9NYM9 111 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 OR5AC2Q9NZP5 309 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 ABRACLQ9P1F3 81 aa2.01□□□□□ -2.09
PABPN1-204ENST00000554062 LRP1Q07954 4544 aaKnown RBP2□□□□□ -2.09
PABPN1-204ENST00000554062 IGLC7A0M8Q6 106 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 PDCD5O14737 125 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 OVOL1O14753 267 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 CRPP02741 224 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 B2MP61769 119 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 UBE2BP63146 152 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 LTC4SQ16873 150 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 DEFB136Q30KP8 78 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 KRTAP13-4Q3LI77 160 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
PABPN1-204ENST00000554062 SMIM15Q7Z3B0 74 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 TMEM167AQ8TBQ9 72 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 SPACA4Q8TDM5 124 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 PLEKHB2Q96CS7 222 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 USMG5Q96IX5 58 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 S100A13Q99584 98 aa2□□□□□ -2.09
PABPN1-204ENST00000554062 METTL1Q9UBP6 276 aaKnown RBP2□□□□□ -2.09
PABPN1-204ENST00000554062 PKHD1L1Q86WI1 4243 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 TRAV3A0A0B4J244 114 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 FAM223BA6NKX1 122 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 A8MWV9 139 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 PPYP01298 95 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 SAA1P0DJI8 122 aaPredicted RBP1.99□□□□□ -2.09
PABPN1-204ENST00000554062 CRYGAP11844 174 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 FXYD3Q14802 87 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 ZNF818PQ6ZRF7 136 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 FAM223AQ8IWN6 122 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 OR10J5Q8NHC4 309 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 NAA38Q9BRA0 125 aaKnown RBP1.99□□□□□ -2.09
PABPN1-204ENST00000554062 SLC50A1Q9BRV3 221 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 PRADC1Q9BSG0 188 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 FAM103A1Q9BTL3 118 aaKnown RBP1.99□□□□□ -2.09
PABPN1-204ENST00000554062 C14orf132Q9NPU4 83 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 NDUFA4L2Q9NRX3 87 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 TMEM14BQ9NUH8 114 aa1.99□□□□□ -2.09
PABPN1-204ENST00000554062 A0A087WXM4 84 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 K7EIM0 57 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms