RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 IGLV1-47P01700 117 aa2.96□□□□□ -1.93
RDH11-204ENST00000553578 MRPS36P82909 103 aaKnown RBP2.96□□□□□ -1.93
RDH11-204ENST00000553578 MRPL51Q4U2R6 128 aaKnown RBP2.96□□□□□ -1.93
RDH11-204ENST00000553578 ACACAQ13085 2346 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 TRAV3A0A0B4J244 114 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 ODF3BA8MYP8 253 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 TMEM256-PLSCR3K7ERE1 68 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 LINC00322Q6ZN03 302 aaPredicted RBP2.96□□□□□ -1.94
RDH11-204ENST00000553578 FAM19A3Q7Z5A8 133 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 Q8NBF4 154 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 MGAQ8IWI9 3026 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 IGLV4-3A0A075B6K6 122 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 NDUFB3O43676 98 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 IGLV2-23P01705 113 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 PRB3Q04118 309 aaPredicted RBP2.96□□□□□ -1.94
RDH11-204ENST00000553578 RPL39P5Q59GN2 51 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 ZNF329Q86UD4 541 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 DMXL1Q9Y485 3027 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 FAM216BQ8N7L0 139 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 SCGB3A1Q96QR1 104 aa2.96□□□□□ -1.94
RDH11-204ENST00000553578 IGHV3OR16-12A0A075B7B8 117 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 IGHV1-58A0A0C4DH39 117 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 TRBV6-1A0A0K0K1D8 114 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 C8orf87E5RJ46 101 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 KTN1-AS1Q86SY8 53 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 C6orf223Q8N319 242 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 NPBQ8NG41 125 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 BPESC1Q9GZL8 116 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 ICOSQ9Y6W8 199 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 NAV3Q8IVL0 2385 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 CREBBPQ92793 2442 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 M0R1W7 72 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 Q8N6K4 173 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 ITLN1Q8WWA0 313 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 ZNRD1Q9P1U0 126 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 DSCAMO60469 2012 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 A0A0J9YY99 117 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 E7EQL1 145 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 SLPIP03973 132 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 PROK1P58294 105 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 C10orf113Q5VZT2 155 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 LYZL1Q6UWQ5 148 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 TMEM167AQ8TBQ9 72 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 TIMM21Q9BVV7 248 aa2.95□□□□□ -1.94
RDH11-204ENST00000553578 INSP01308 110 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 IGHV3-30P01768 117 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 CHTF8P0CG12 524 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 IGHV3-30-5P0DP03 117 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 FUSP35637 526 aaKnown RBP eCLIP2.94□□□□□ -1.94
RDH11-204ENST00000553578 CXCL6P80162 114 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 NDPQ00604 133 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 PRCDQ00LT1 54 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 PLGLAQ15195 96 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 C2orf66Q6UXQ4 117 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.94□□□□□ -1.94
RDH11-204ENST00000553578 NDUFA4L2Q9NRX3 87 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 MUSTN1Q8IVN3 82 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 RMI2Q96E14 147 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 ZFHX2Q9C0A1 2572 aaPredicted RBP2.94□□□□□ -1.94
RDH11-204ENST00000553578 M0R381 172 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 HCP5Q6MZN7 132 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 UNQ9165/PRO28630Q6UXU0 137 aa2.94□□□□□ -1.94
RDH11-204ENST00000553578 COL6A6A6NMZ7 2263 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 TRBV30A0A0K0K1B3 111 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 H7BZZ5 65 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 COX7A2LO14548 114 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 PSPHP1O15172 72 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 TMEM263Q8WUH6 116 aaKnown RBP2.93□□□□□ -1.94
RDH11-204ENST00000553578 VSIG2Q96IQ7 327 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 ADGRG4Q8IZF6 3080 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 ZNF73O43830 326 aaPredicted RBP2.93□□□□□ -1.94
RDH11-204ENST00000553578 PRB1P04280 392 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 BAALC-AS2P0C853 105 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 Q6ZRP5 223 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 TET2Q6N021 2002 aaPredicted RBP2.93□□□□□ -1.94
RDH11-204ENST00000553578 IGHV3-64A0A075B6Q5 118 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 TRBV27A0A0K0K1C4 114 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 LRCOL1A6NCL2 159 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 NXPH4O95158 308 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 PLA2G2AP14555 144 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 DEFB121Q5J5C9 76 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 WFDC9Q8NEX5 89 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 CTSZQ9UBR2 303 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 SORL1Q92673 2214 aa2.93□□□□□ -1.94
RDH11-204ENST00000553578 IGHV3-72A0A0B4J1Y9 119 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 A0A0J9YXV3 536 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 TMEM223A0PJW6 202 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 LST1O00453 97 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 SAA2P0DJI9 122 aaPredicted RBP2.92□□□□□ -1.94
RDH11-204ENST00000553578 ATP5EP56381 51 aaPredicted RBP2.92□□□□□ -1.94
RDH11-204ENST00000553578 LYPD5Q6UWN5 251 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 C20orf203Q8NBC4 194 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 SMG1Q96Q15 3661 aaKnown RBP2.92□□□□□ -1.94
RDH11-204ENST00000553578 ARHGAP32A7KAX9 2087 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 TRAV21A0A0B4J279 112 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 IGHV3-38A0A0C4DH36 116 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 E7EUB6 86 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 Q6JHZ5 121 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 C14orf178Q8N769 122 aaPredicted RBP2.92□□□□□ -1.94
RDH11-204ENST00000553578 SPG11Q96JI7 2443 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms