RNA–Protein interactions for RNA: ENST00000551134.5

C12orf42-212, Transcript of chromosome 12 open reading frame 42, human

TSL 1 (best)

Gene C12orf42, Length 1,557 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C12orf42-212	ENST00000551134	APOB	P04114	4563 aa	Known RBP	11.48	□□□□□ -0.57
C12orf42-212	ENST00000551134	HSPG2	P98160	4391 aa		11.48	□□□□□ -0.57
C12orf42-212	ENST00000551134	LAMTOR2	Q9Y2Q5	125 aa		11.47	□□□□□ -0.57
C12orf42-212	ENST00000551134	IGKV3OR2-268	A0A0C4DH90	116 aa		11.46	□□□□□ -0.57
C12orf42-212	ENST00000551134	TMEM18	Q96B42	140 aa		11.46	□□□□□ -0.57
C12orf42-212	ENST00000551134	CSDC2	Q9Y534	153 aa	Known RBP	11.46	□□□□□ -0.57
C12orf42-212	ENST00000551134	CDC42SE2	Q9NRR3	84 aa		11.45	□□□□□ -0.58
C12orf42-212	ENST00000551134	CLRN3	Q8NCR9	226 aa		11.45	□□□□□ -0.58
C12orf42-212	ENST00000551134	PRSS47	A8MTI9	375 aa		11.44	□□□□□ -0.58
C12orf42-212	ENST00000551134	S100P	P25815	95 aa		11.44	□□□□□ -0.58
C12orf42-212	ENST00000551134	XG	P55808	180 aa		11.44	□□□□□ -0.58
C12orf42-212	ENST00000551134	RHEB	Q15382	184 aa		11.44	□□□□□ -0.58
C12orf42-212	ENST00000551134	DGAT2L7P	Q6IED9	249 aa		11.44	□□□□□ -0.58
C12orf42-212	ENST00000551134	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.44	□□□□□ -0.58
C12orf42-212	ENST00000551134	TIMM21	Q9BVV7	248 aa		11.44	□□□□□ -0.58
C12orf42-212	ENST00000551134	UBE2D4	Q9Y2X8	147 aa		11.44	□□□□□ -0.58
C12orf42-212	ENST00000551134	GAGE12H	A6NDE8	117 aa		11.43	□□□□□ -0.58
C12orf42-212	ENST00000551134	PRSS1	P07477	247 aa		11.43	□□□□□ -0.58
C12orf42-212	ENST00000551134	ZNF664	Q8N3J9	261 aa		11.43	□□□□□ -0.58
C12orf42-212	ENST00000551134	LINC00959	A0A1B0GUT2	108 aa		11.42	□□□□□ -0.58
C12orf42-212	ENST00000551134	MAP1LC3A	Q9H492	121 aa		11.42	□□□□□ -0.58
C12orf42-212	ENST00000551134	RAB5A	P20339	215 aa		11.41	□□□□□ -0.58
C12orf42-212	ENST00000551134		Q8N1X5	172 aa		11.41	□□□□□ -0.58
C12orf42-212	ENST00000551134	RPS10P5	Q9NQ39	176 aa		11.41	□□□□□ -0.58
C12orf42-212	ENST00000551134	SS18	Q15532	418 aa		11.4	□□□□□ -0.58
C12orf42-212	ENST00000551134	CFAP161	Q6P656	301 aa		11.4	□□□□□ -0.58
C12orf42-212	ENST00000551134	RPL39	P62891	51 aa	Known RBP	11.39	□□□□□ -0.59
C12orf42-212	ENST00000551134	LINC01620	Q4KN68	170 aa		11.39	□□□□□ -0.59
C12orf42-212	ENST00000551134		Q6ZSA8	131 aa		11.39	□□□□□ -0.59
C12orf42-212	ENST00000551134	KRTAP17-1	Q9BYP8	105 aa		11.39	□□□□□ -0.59
C12orf42-212	ENST00000551134	SPANXA1	Q9NS26	97 aa		11.39	□□□□□ -0.59
C12orf42-212	ENST00000551134	FAM30A	Q9NZY2	134 aa		11.39	□□□□□ -0.59
C12orf42-212	ENST00000551134	LOC389332	A0A1B0GUA5	103 aa		11.38	□□□□□ -0.59
C12orf42-212	ENST00000551134	hDV102S1	A0JD36	115 aa		11.38	□□□□□ -0.59
C12orf42-212	ENST00000551134	CCL25	O15444	150 aa		11.38	□□□□□ -0.59
C12orf42-212	ENST00000551134	FOXI1	Q12951	378 aa		11.38	□□□□□ -0.59
C12orf42-212	ENST00000551134	NDUFA5	Q16718	116 aa		11.38	□□□□□ -0.59
C12orf42-212	ENST00000551134	COX19	Q49B96	90 aa		11.38	□□□□□ -0.59
C12orf42-212	ENST00000551134	GNB1L	Q9BYB4	327 aa		11.38	□□□□□ -0.59
C12orf42-212	ENST00000551134	APOC3	P02656	99 aa		11.37	□□□□□ -0.59
C12orf42-212	ENST00000551134	XCL1	P47992	114 aa		11.37	□□□□□ -0.59
C12orf42-212	ENST00000551134		Q8N8P6	123 aa		11.37	□□□□□ -0.59
C12orf42-212	ENST00000551134	CNBP	P62633	177 aa	Known RBP	11.37	□□□□□ -0.59
C12orf42-212	ENST00000551134		Q6ZUT4	128 aa		11.37	□□□□□ -0.59
C12orf42-212	ENST00000551134	C15orf56	Q8N910	161 aa		11.37	□□□□□ -0.59
C12orf42-212	ENST00000551134	AP5S1	Q9NUS5	200 aa		11.37	□□□□□ -0.59
C12orf42-212	ENST00000551134	C1orf196	B1AJZ1	125 aa		11.36	□□□□□ -0.59
C12orf42-212	ENST00000551134		K7EMI3	77 aa		11.36	□□□□□ -0.59
C12orf42-212	ENST00000551134	SNAPIN	O95295	136 aa		11.36	□□□□□ -0.59
C12orf42-212	ENST00000551134	RNASE13	Q5GAN3	156 aa	Known RBP	11.36	□□□□□ -0.59
C12orf42-212	ENST00000551134	CD164L2	Q6UWJ8	174 aa		11.36	□□□□□ -0.59
C12orf42-212	ENST00000551134	SVBP	Q8N300	66 aa		11.36	□□□□□ -0.59
C12orf42-212	ENST00000551134	C9orf163	Q8N9P6	203 aa		11.36	□□□□□ -0.59
C12orf42-212	ENST00000551134	NXT2	Q9NPJ8	142 aa	Known RBP	11.36	□□□□□ -0.59
C12orf42-212	ENST00000551134	MRPS36	P82909	103 aa	Known RBP	11.35	□□□□□ -0.59
C12orf42-212	ENST00000551134	KIAA1644	Q3SXP7	199 aa		11.35	□□□□□ -0.59
C12orf42-212	ENST00000551134	KRTAP4-5	Q9BYR2	181 aa		11.35	□□□□□ -0.59
C12orf42-212	ENST00000551134	MT-ND6	P03923	174 aa		11.34	□□□□□ -0.59
C12orf42-212	ENST00000551134	FAM104A	Q969W3	186 aa		11.34	□□□□□ -0.59
C12orf42-212	ENST00000551134	DNAH8	Q96JB1	4490 aa		11.33	□□□□□ -0.6
C12orf42-212	ENST00000551134	IFI27	P40305	119 aa	Predicted RBP	11.33	□□□□□ -0.6
C12orf42-212	ENST00000551134	HAMP	P81172	84 aa		11.33	□□□□□ -0.6
C12orf42-212	ENST00000551134	ORMDL2	Q53FV1	153 aa		11.33	□□□□□ -0.6
C12orf42-212	ENST00000551134	PYGO1	Q9Y3Y4	419 aa		11.33	□□□□□ -0.6
C12orf42-212	ENST00000551134	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.33	□□□□□ -0.6
C12orf42-212	ENST00000551134	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.33	□□□□□ -0.6
C12orf42-212	ENST00000551134	TRAV13-1	A0A0B4J241	112 aa		11.33	□□□□□ -0.6
C12orf42-212	ENST00000551134	IGHV1-58	A0A0C4DH39	117 aa		11.32	□□□□□ -0.6
C12orf42-212	ENST00000551134	SLPI	P03973	132 aa		11.31	□□□□□ -0.6
C12orf42-212	ENST00000551134	HIGD2B	Q4VC39	106 aa		11.31	□□□□□ -0.6
C12orf42-212	ENST00000551134	OPRPN	Q99935	248 aa	Predicted RBP	11.31	□□□□□ -0.6
C12orf42-212	ENST00000551134	CYSLTR1	Q9Y271	337 aa		11.31	□□□□□ -0.6
C12orf42-212	ENST00000551134	PCLO	Q9Y6V0	5065 aa		11.31	□□□□□ -0.6
C12orf42-212	ENST00000551134	EPM2A	B3EWF7	344 aa		11.3	□□□□□ -0.6
C12orf42-212	ENST00000551134	C2orf66	Q6UXQ4	117 aa		11.3	□□□□□ -0.6
C12orf42-212	ENST00000551134	MRPL18	Q9H0U6	180 aa	Known RBP	11.3	□□□□□ -0.6
C12orf42-212	ENST00000551134	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.29	□□□□□ -0.6
C12orf42-212	ENST00000551134	CHAC1	Q9BUX1	264 aa		11.29	□□□□□ -0.6
C12orf42-212	ENST00000551134	IGLV4-3	A0A075B6K6	122 aa		11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	IGHV3-64	A0A075B6Q5	118 aa		11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	COX7A2L	O14548	114 aa		11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	SMR3B	P02814	79 aa	Predicted RBP	11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	G0S2	P27469	103 aa		11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	FABP9	Q0Z7S8	132 aa		11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	SDIM1	Q6ZPB5	146 aa		11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	SCX	Q7RTU7	201 aa		11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	IFITM10	A6NMD0	228 aa		11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	TMEM141	Q96I45	108 aa		11.28	□□□□□ -0.6
C12orf42-212	ENST00000551134	NPS	P0C0P6	89 aa		11.27	□□□□□ -0.61
C12orf42-212	ENST00000551134	MAL	P21145	153 aa		11.27	□□□□□ -0.61
C12orf42-212	ENST00000551134		Q5VSD8	79 aa		11.27	□□□□□ -0.61
C12orf42-212	ENST00000551134	PRSS3P2	Q8NHM4	247 aa		11.27	□□□□□ -0.61
C12orf42-212	ENST00000551134	LINC01546	A6NGU7	62 aa		11.25	□□□□□ -0.61
C12orf42-212	ENST00000551134	FAM229A	H3BQW9	127 aa		11.25	□□□□□ -0.61
C12orf42-212	ENST00000551134	TEX43	Q6ZNM6	134 aa		11.25	□□□□□ -0.61
C12orf42-212	ENST00000551134	C5orf38	Q86SI9	138 aa		11.25	□□□□□ -0.61
C12orf42-212	ENST00000551134	CIRBP-AS1	Q8TBR5	109 aa		11.25	□□□□□ -0.61
C12orf42-212	ENST00000551134	ABCA13	Q86UQ4	5058 aa		11.24	□□□□□ -0.61
C12orf42-212	ENST00000551134	IGIP	A6NJ69	53 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms