RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CAMK2N2Q96S95 79 aa11.85□□□□□ -0.51
RBFOX1-212ENST00000550418 NDUFA1O15239 70 aa11.85□□□□□ -0.51
RBFOX1-212ENST00000550418 TRBV6-5A0A0K0K1A5 114 aa11.84□□□□□ -0.51
RBFOX1-212ENST00000550418 LRP4O75096 1905 aa11.84□□□□□ -0.51
RBFOX1-212ENST00000550418 HIGD2BQ4VC39 106 aa11.84□□□□□ -0.51
RBFOX1-212ENST00000550418 UBE2DNLQ8IWF7 75 aa11.84□□□□□ -0.51
RBFOX1-212ENST00000550418 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
RBFOX1-212ENST00000550418 UBE2D1P51668 147 aa11.83□□□□□ -0.51
RBFOX1-212ENST00000550418 RPL18AQ02543 176 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-212ENST00000550418 PIK3CD-AS1Q5SR53 167 aa11.83□□□□□ -0.52
RBFOX1-212ENST00000550418 DIRC1Q969H9 104 aa11.83□□□□□ -0.52
RBFOX1-212ENST00000550418 USP17L23D6RBM5 183 aa11.83□□□□□ -0.52
RBFOX1-212ENST00000550418 H7C423 109 aa11.83□□□□□ -0.52
RBFOX1-212ENST00000550418 ETDCA0A1B0GVM5 59 aa11.82□□□□□ -0.52
RBFOX1-212ENST00000550418 ENHOQ6UWT2 76 aa11.82□□□□□ -0.52
RBFOX1-212ENST00000550418 POLR2KP53803 58 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-212ENST00000550418 PYGO1Q9Y3Y4 419 aa11.82□□□□□ -0.52
RBFOX1-212ENST00000550418 TIMM17BO60830 172 aa11.82□□□□□ -0.52
RBFOX1-212ENST00000550418 TIRAPP58753 221 aa11.82□□□□□ -0.52
RBFOX1-212ENST00000550418 LY6LH3BQJ8 138 aa11.82□□□□□ -0.52
RBFOX1-212ENST00000550418 ADORA2A-AS1P86434 159 aa11.82□□□□□ -0.52
RBFOX1-212ENST00000550418 A0A096LNJ9 63 aa11.81□□□□□ -0.52
RBFOX1-212ENST00000550418 TMEM89A2RUT3 159 aa11.81□□□□□ -0.52
RBFOX1-212ENST00000550418 SLPIP03973 132 aa11.81□□□□□ -0.52
RBFOX1-212ENST00000550418 A8MZ25 164 aa11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 EML5Q05BV3 1969 aa11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 IGKV2D-24A0A075B6R9 120 aa11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 IGHV4-30-2A0A087WSY4 118 aa11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 RNASE3P12724 160 aaKnown RBP11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 SPAG11BQ08648 103 aa11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 FAM240AA0A1B0GVK7 77 aa11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 UBE2BP63146 152 aa11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 LRRC75A-AS1Q8N1F1 130 aa11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 ZNF843Q8N446 348 aa11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 EBI3Q14213 229 aa11.8□□□□□ -0.52
RBFOX1-212ENST00000550418 UBE2D3P61077 147 aa11.79□□□□□ -0.52
RBFOX1-212ENST00000550418 UBE2D2P62837 147 aa11.79□□□□□ -0.52
RBFOX1-212ENST00000550418 NRGNQ92686 78 aa11.79□□□□□ -0.52
RBFOX1-212ENST00000550418 K7EQG2 157 aa11.79□□□□□ -0.52
RBFOX1-212ENST00000550418 JMJD1CQ15652 2540 aa11.79□□□□□ -0.52
RBFOX1-212ENST00000550418 LRRK2Q5S007 2527 aa11.78□□□□□ -0.52
RBFOX1-212ENST00000550418 LINC00694P0DN24 101 aa11.78□□□□□ -0.52
RBFOX1-212ENST00000550418 PRR9Q5T870 116 aa11.78□□□□□ -0.52
RBFOX1-212ENST00000550418 C10orf105Q8TEF2 133 aa11.78□□□□□ -0.52
RBFOX1-212ENST00000550418 PKIGQ9Y2B9 76 aa11.78□□□□□ -0.52
RBFOX1-212ENST00000550418 TSHBP01222 138 aa11.78□□□□□ -0.52
RBFOX1-212ENST00000550418 M0QXV9 152 aa11.77□□□□□ -0.52
RBFOX1-212ENST00000550418 CDH23Q9H251 3354 aa11.77□□□□□ -0.52
RBFOX1-212ENST00000550418 A6NDX4 124 aa11.77□□□□□ -0.53
RBFOX1-212ENST00000550418 MPLKIPQ8TAP9 179 aa11.77□□□□□ -0.53
RBFOX1-212ENST00000550418 IBA57-AS1B1ANH7 110 aa11.77□□□□□ -0.53
RBFOX1-212ENST00000550418 IGIPA6NJ69 53 aa11.76□□□□□ -0.53
RBFOX1-212ENST00000550418 NDUFC2-KCTD14E9PQ53 114 aa11.76□□□□□ -0.53
RBFOX1-212ENST00000550418 RMI2Q96E14 147 aa11.76□□□□□ -0.53
RBFOX1-212ENST00000550418 FAM222AQ5U5X8 452 aa11.76□□□□□ -0.53
RBFOX1-212ENST00000550418 FAM110AQ9BQ89 295 aa11.76□□□□□ -0.53
RBFOX1-212ENST00000550418 BPY2O14599 106 aa11.75□□□□□ -0.53
RBFOX1-212ENST00000550418 FSTL3O95633 263 aa11.75□□□□□ -0.53
RBFOX1-212ENST00000550418 CRIP2P52943 208 aaPredicted RBP11.75□□□□□ -0.53
RBFOX1-212ENST00000550418 ESM1Q9NQ30 184 aa11.75□□□□□ -0.53
RBFOX1-212ENST00000550418 COX7BP24311 80 aa11.75□□□□□ -0.53
RBFOX1-212ENST00000550418 FBXL19-AS1Q494R0 122 aa11.75□□□□□ -0.53
RBFOX1-212ENST00000550418 Q6ZTI0 123 aa11.75□□□□□ -0.53
RBFOX1-212ENST00000550418 A0A0U1RQV1 116 aa11.74□□□□□ -0.53
RBFOX1-212ENST00000550418 MAP6D1Q9H9H5 199 aa11.74□□□□□ -0.53
RBFOX1-212ENST00000550418 TRIOO75962 3097 aa11.74□□□□□ -0.53
RBFOX1-212ENST00000550418 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
RBFOX1-212ENST00000550418 XIRP2A4UGR9 3374 aa11.74□□□□□ -0.53
RBFOX1-212ENST00000550418 NDUFS5O43920 106 aa11.74□□□□□ -0.53
RBFOX1-212ENST00000550418 DSCAMO60469 2012 aa11.73□□□□□ -0.53
RBFOX1-212ENST00000550418 PROK1P58294 105 aa11.73□□□□□ -0.53
RBFOX1-212ENST00000550418 LMO4P61968 165 aa11.72□□□□□ -0.53
RBFOX1-212ENST00000550418 SCXQ7RTU7 201 aa11.71□□□□□ -0.53
RBFOX1-212ENST00000550418 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.53
RBFOX1-212ENST00000550418 CRYGDP07320 174 aa11.71□□□□□ -0.54
RBFOX1-212ENST00000550418 AGRNO00468 2067 aa11.7□□□□□ -0.54
RBFOX1-212ENST00000550418 KLLNB2CW77 178 aa11.7□□□□□ -0.54
RBFOX1-212ENST00000550418 LINC00526Q96FQ7 95 aa11.7□□□□□ -0.54
RBFOX1-212ENST00000550418 PRO0255Q9UI72 69 aa11.7□□□□□ -0.54
RBFOX1-212ENST00000550418 KLK12Q9UKR0 248 aa11.7□□□□□ -0.54
RBFOX1-212ENST00000550418 TRANK1O15050 2925 aa11.7□□□□□ -0.54
RBFOX1-212ENST00000550418 SPART-AS1P0CW21 52 aa11.7□□□□□ -0.54
RBFOX1-212ENST00000550418 MRPS36P82909 103 aaKnown RBP11.7□□□□□ -0.54
RBFOX1-212ENST00000550418 SMIM9A6NGZ8 99 aa11.69□□□□□ -0.54
RBFOX1-212ENST00000550418 NDUFC1O43677 76 aa11.69□□□□□ -0.54
RBFOX1-212ENST00000550418 CDIP1Q9H305 208 aa11.69□□□□□ -0.54
RBFOX1-212ENST00000550418 EPG5Q9HCE0 2579 aa11.69□□□□□ -0.54
RBFOX1-212ENST00000550418 Q6JHZ5 121 aa11.69□□□□□ -0.54
RBFOX1-212ENST00000550418 IGLV4-69A0A075B6H9 119 aa11.68□□□□□ -0.54
RBFOX1-212ENST00000550418 C6orf99Q4VX62 202 aa11.68□□□□□ -0.54
RBFOX1-212ENST00000550418 POLQO75417 2590 aa11.68□□□□□ -0.54
RBFOX1-212ENST00000550418 BPTFQ12830 3046 aa11.68□□□□□ -0.54
RBFOX1-212ENST00000550418 NDUFB1O75438 58 aa11.68□□□□□ -0.54
RBFOX1-212ENST00000550418 V9GYY9 64 aa11.68□□□□□ -0.54
RBFOX1-212ENST00000550418 TSPEAR-AS2P59090 65 aa11.68□□□□□ -0.54
RBFOX1-212ENST00000550418 Q8N6K4 173 aa11.68□□□□□ -0.54
RBFOX1-212ENST00000550418 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
RBFOX1-212ENST00000550418 COX8CQ7Z4L0 72 aa11.67□□□□□ -0.54
RBFOX1-212ENST00000550418 SVIPQ8NHG7 77 aa11.67□□□□□ -0.54
RBFOX1-212ENST00000550418 SNURFQ9Y675 71 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms